# HG changeset patch -- Bitbucket.org # Project galaxy-dist # URL http://bitbucket.org/galaxy/galaxy-dist/overview # User Nate Coraor <nate@bx.psu.edu> # Date 1285818943 14400 # Node ID 546dc4845175c92c91e181af61b6e1d2a108230e # Parent 940d77bec4d59a5418f9f731ca6ca114d748aa5d New hyphy nj tree test output for ps2pdf version standardized across all systems, and fix for the wig_to_bigwig test. --- /dev/null +++ b/test-data/wig_to_bigwig_hg17.len @@ -0,0 +1,46 @@ +chr10 135413628 +chr10_random 113275 +chr11 134452384 +chr12 132449811 +chr12_random 466818 +chr13 114142980 +chr13_random 186858 +chr14 106368585 +chr15 100338915 +chr15_random 784346 +chr16 88827254 +chr16_random 105485 +chr17 78774742 +chr17_random 2618010 +chr18 76117153 +chr18_random 4262 +chr19 63811651 +chr19_random 301858 +chr1 245522847 +chr1_random 3897131 +chr20 62435964 +chr21 46944323 +chr22 49554710 +chr22_random 257318 +chr2 243018229 +chr2_random 418158 +chr3 199505740 +chr3_random 970716 +chr4 191411218 +chr4_random 1030282 +chr5 180857866 +chr5_random 143687 +chr6 170975699 +chr6_random 1875562 +chr6_hla_hap1 139182 +chr6_hla_hap2 150447 +chr7 158628139 +chr7_random 778964 +chr8 146274826 +chr8_random 943810 +chr9 138429268 +chr9_random 1312665 +chrM 16571 +chrX 154824264 +chrX_random 1719168 +chrY 57701691 Binary file test-data/nj_tree_pdf_out.pdf has changed --- a/buildbot_setup.sh +++ b/buildbot_setup.sh @@ -108,4 +108,10 @@ for dir in $DIRS; do fi done +# for wig_to_bigWig +if [ ! -f "tool-data/shared/ucsc/chrom/hg17.len" -a -f "test-data/wig_to_bigwig_hg17.len" ]; then + mkdir -p tool-data/shared/ucsc/chrom + cp test-data/wig_to_bigwig_hg17.len tool-data/shared/ucsc/chrom/hg17.len +fi + python ./scripts/fetch_eggs.py all