Branch: refs/heads/release_18.05 Home: https://github.com/galaxyproject/galaxy Commit: 65c1cd761c48ba121a847d4d501eb8a97a911e70 https://github.com/galaxyproject/galaxy/commit/65c1cd761c48ba121a847d4d501eb... Author: John Chilton <jmchilton@gmail.com> Date: 2018-05-22 (Tue, 22 May 2018) Changed paths: M lib/galaxy/datatypes/sniff.py M lib/galaxy/datatypes/upload_util.py M lib/galaxy/jobs/__init__.py M lib/galaxy_ext/metadata/set_metadata.py Log Message: ----------- Fix data_source.py for upload changes in 18.05 release cycle. handle_uploaded_dataset_file was used by tools external to ``lib/`` include data_source.py and potentially tools in the tool shed. This restores the interface as a wrapper around a new method handle_uploaded_dataset_file_internal. Broken in https://github.com/galaxyproject/galaxy/commit/ef6f7f62ab679928045c816a3cb71... I believe. Commit: 44e57ba8b45d2ddd624333547ec1adeb62d70b9c https://github.com/galaxyproject/galaxy/commit/44e57ba8b45d2ddd624333547ec1a... Author: Nicola Soranzo <nicola.soranzo@gmail.com> Date: 2018-05-23 (Wed, 23 May 2018) Changed paths: M lib/galaxy/datatypes/sniff.py M lib/galaxy/datatypes/upload_util.py M lib/galaxy/jobs/__init__.py M lib/galaxy_ext/metadata/set_metadata.py Log Message: ----------- Merge pull request #6196 from jmchilton/fix_metadata [18.05] Fix data_source.py for upload changes in 18.05 release cycle. Compare: https://github.com/galaxyproject/galaxy/compare/ebc6734ed787...44e57ba8b45d **NOTE:** This service been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.