[galaxy-commits] [galaxyproject/galaxy] adb577: UI: use strict and replace leaky uses of Backbone....

15 Jan 2016

      Branch: refs/heads/dev
  Home:   https://github.com/galaxyproject/galaxy
  Commit: adb577e7f85d981c2877452e0915eb0ed509655e
      https://github.com/galaxyproject/galaxy/commit/adb577e7f85d981c2877452e0915e...
  Author: carlfeberhard <carlfeberhard@gmail.com>
  Date:   2016-01-12 (Tue, 12 Jan 2016)

  Changed paths:
    M client/galaxy/scripts/mvc/base-mvc.js
    M client/galaxy/scripts/mvc/collection/collection-li-edit.js
    M client/galaxy/scripts/mvc/collection/collection-li.js
    M client/galaxy/scripts/mvc/collection/collection-model.js
    M client/galaxy/scripts/mvc/collection/collection-view-edit.js
    M client/galaxy/scripts/mvc/collection/collection-view.js
    M client/galaxy/scripts/mvc/collection/list-collection-creator.js
    M client/galaxy/scripts/mvc/collection/list-of-pairs-collection-creator.js
    M client/galaxy/scripts/mvc/collection/pair-collection-creator.js
    M client/galaxy/scripts/mvc/dataset/dataset-choice.js
    M client/galaxy/scripts/mvc/dataset/dataset-li-edit.js
    M client/galaxy/scripts/mvc/dataset/dataset-li.js
    M client/galaxy/scripts/mvc/dataset/dataset-list.js
    M client/galaxy/scripts/mvc/dataset/dataset-model.js
    M client/galaxy/scripts/mvc/dataset/states.js
    M client/galaxy/scripts/mvc/history/copy-dialog.js
    M client/galaxy/scripts/mvc/history/hda-li-edit.js
    M client/galaxy/scripts/mvc/history/hda-li.js
    M client/galaxy/scripts/mvc/history/hda-model.js
    M client/galaxy/scripts/mvc/history/hdca-li-edit.js
    M client/galaxy/scripts/mvc/history/hdca-li.js
    M client/galaxy/scripts/mvc/history/hdca-model.js
    M client/galaxy/scripts/mvc/history/history-content-model.js
    M client/galaxy/scripts/mvc/history/history-contents.js
    M client/galaxy/scripts/mvc/history/history-model.js
    M client/galaxy/scripts/mvc/history/history-structure-view.js
    M client/galaxy/scripts/mvc/history/history-view-annotated.js
    M client/galaxy/scripts/mvc/history/history-view-edit-current.js
    M client/galaxy/scripts/mvc/history/history-view-edit.js
    M client/galaxy/scripts/mvc/history/history-view.js
    M client/galaxy/scripts/mvc/history/job-dag.js
    M client/galaxy/scripts/mvc/history/multi-panel.js
    M client/galaxy/scripts/mvc/history/options-menu.js
    M client/galaxy/scripts/mvc/list/list-item.js
    M client/galaxy/scripts/mvc/list/list-view.js
    M client/galaxy/scripts/mvc/user/user-model.js
    M client/galaxy/scripts/mvc/user/user-quotameter.js
    M static/maps/mvc/base-mvc.js.map
    M static/maps/mvc/collection/collection-li-edit.js.map
    M static/maps/mvc/collection/collection-li.js.map
    M static/maps/mvc/collection/collection-model.js.map
    M static/maps/mvc/collection/collection-view-edit.js.map
    M static/maps/mvc/collection/collection-view.js.map
    M static/maps/mvc/collection/list-collection-creator.js.map
    M static/maps/mvc/collection/list-of-pairs-collection-creator.js.map
    M static/maps/mvc/collection/pair-collection-creator.js.map
    M static/maps/mvc/dataset/dataset-choice.js.map
    M static/maps/mvc/dataset/dataset-li-edit.js.map
    M static/maps/mvc/dataset/dataset-li.js.map
    M static/maps/mvc/dataset/dataset-list.js.map
    M static/maps/mvc/dataset/dataset-model.js.map
    M static/maps/mvc/dataset/states.js.map
    M static/maps/mvc/history/copy-dialog.js.map
    M static/maps/mvc/history/hda-li-edit.js.map
    M static/maps/mvc/history/hda-li.js.map
    M static/maps/mvc/history/hda-model.js.map
    M static/maps/mvc/history/hdca-li-edit.js.map
    M static/maps/mvc/history/hdca-li.js.map
    M static/maps/mvc/history/hdca-model.js.map
    M static/maps/mvc/history/history-content-model.js.map
    M static/maps/mvc/history/history-contents.js.map
    M static/maps/mvc/history/history-model.js.map
    M static/maps/mvc/history/history-structure-view.js.map
    M static/maps/mvc/history/history-view-annotated.js.map
    M static/maps/mvc/history/history-view-edit-current.js.map
    M static/maps/mvc/history/history-view-edit.js.map
    M static/maps/mvc/history/history-view.js.map
    M static/maps/mvc/history/job-dag.js.map
    M static/maps/mvc/history/multi-panel.js.map
    M static/maps/mvc/history/options-menu.js.map
    M static/maps/mvc/list/list-item.js.map
    M static/maps/mvc/list/list-view.js.map
    M static/maps/mvc/user/user-model.js.map
    M static/maps/mvc/user/user-quotameter.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/mvc/base-mvc.js
    M static/scripts/mvc/collection/collection-li-edit.js
    M static/scripts/mvc/collection/collection-li.js
    M static/scripts/mvc/collection/collection-model.js
    M static/scripts/mvc/collection/collection-view-edit.js
    M static/scripts/mvc/collection/collection-view.js
    M static/scripts/mvc/collection/list-collection-creator.js
    M static/scripts/mvc/collection/list-of-pairs-collection-creator.js
    M static/scripts/mvc/collection/pair-collection-creator.js
    M static/scripts/mvc/dataset/dataset-choice.js
    M static/scripts/mvc/dataset/dataset-li-edit.js
    M static/scripts/mvc/dataset/dataset-li.js
    M static/scripts/mvc/dataset/dataset-list.js
    M static/scripts/mvc/dataset/dataset-model.js
    M static/scripts/mvc/dataset/states.js
    M static/scripts/mvc/history/hda-li-edit.js
    M static/scripts/mvc/history/hda-li.js
    M static/scripts/mvc/history/hda-model.js
    M static/scripts/mvc/history/hdca-li-edit.js
    M static/scripts/mvc/history/hdca-li.js
    M static/scripts/mvc/history/hdca-model.js
    M static/scripts/mvc/history/history-content-model.js
    M static/scripts/mvc/history/history-contents.js
    M static/scripts/mvc/history/history-model.js
    M static/scripts/mvc/history/history-structure-view.js
    M static/scripts/mvc/history/history-view-annotated.js
    M static/scripts/mvc/history/history-view-edit-current.js
    M static/scripts/mvc/history/history-view-edit.js
    M static/scripts/mvc/history/history-view.js
    M static/scripts/mvc/history/job-dag.js
    M static/scripts/mvc/history/multi-panel.js
    M static/scripts/mvc/list/list-item.js
    M static/scripts/mvc/list/list-view.js
    M static/scripts/mvc/user/user-model.js
    M static/scripts/mvc/user/user-quotameter.js

  Log Message:
  -----------
  UI: use strict and replace leaky uses of Backbone.Events.on with listenTo

  Commit: d5d39ed85cb96a70ae739cd5210859ee2153dcc5
      https://github.com/galaxyproject/galaxy/commit/d5d39ed85cb96a70ae739cd521085...
  Author: carlfeberhard <carlfeberhard@gmail.com>
  Date:   2016-01-15 (Fri, 15 Jan 2016)

  Changed paths:
    M .gitignore
    M client/galaxy/scripts/layout/menu.js
    M client/galaxy/scripts/mvc/collection/list-collection-creator.js
    M client/galaxy/scripts/mvc/form/form-data.js
    M client/galaxy/scripts/mvc/form/form-input.js
    M client/galaxy/scripts/mvc/form/form-parameters.js
    M client/galaxy/scripts/mvc/form/form-repeat.js
    M client/galaxy/scripts/mvc/form/form-view.js
    M client/galaxy/scripts/mvc/history/history-view-edit.js
    M client/galaxy/scripts/mvc/library/library-foldertoolbar-view.js
    M client/galaxy/scripts/mvc/tool/tool-form-base.js
    M client/galaxy/scripts/mvc/tool/tool-form-workflow.js
    M client/galaxy/scripts/mvc/ui/ui-list.js
    M client/galaxy/scripts/mvc/ui/ui-misc.js
    M client/galaxy/scripts/mvc/upload/default/default-row.js
    M client/galaxy/scripts/mvc/upload/upload-settings.js
    M client/galaxy/scripts/mvc/workflow/workflow-view.js
    M client/galaxy/scripts/utils/utils.js
    M client/galaxy/style/less/ui.less
    M client/galaxy/style/less/upload.less
    M config/galaxy.ini.sample
    R config/plugins/interactive_environments/ipython/config/ipython.ini.sample
    R config/plugins/interactive_environments/ipython/config/ipython.xml
    R config/plugins/interactive_environments/ipython/static/js/ipython.js
    R config/plugins/interactive_environments/ipython/templates/ipython.mako
    R config/plugins/interactive_environments/ipython/templates/notebook.ipynb
    M config/plugins/tours/core.galaxy_ui.yaml
    M config/plugins/tours/core.history.yaml
    A config/plugins/tours/core.scratchbook.yaml
    R config/plugins/visualizations/charts/static/build-app.js
    M lib/galaxy/config.py
    M lib/galaxy/datatypes/tabular.py
    A lib/galaxy/dependencies/pinned-hashed-requirements.txt
    M lib/galaxy/dependencies/pinned-requirements.txt
    M lib/galaxy/jobs/__init__.py
    M lib/galaxy/jobs/command_factory.py
    M lib/galaxy/jobs/runners/__init__.py
    M lib/galaxy/jobs/runners/util/job_script/DEFAULT_JOB_FILE_TEMPLATE.sh
    M lib/galaxy/jobs/runners/util/job_script/__init__.py
    M lib/galaxy/managers/rbac_secured.py
    M lib/galaxy/model/__init__.py
    M lib/galaxy/model/custom_types.py
    M lib/galaxy/model/migrate/versions/0052_sample_dataset_table.py
    M lib/galaxy/model/migrate/versions/0065_add_name_to_form_fields_and_values.py
    M lib/galaxy/model/migrate/versions/0067_populate_sequencer_table.py
    M lib/galaxy/tools/__init__.py
    M lib/galaxy/tools/actions/__init__.py
    M lib/galaxy/tools/actions/upload_common.py
    M lib/galaxy/tools/cwl/cwltool_deps.py
    M lib/galaxy/tools/deps/resolvers/__init__.py
    M lib/galaxy/tools/deps/resolvers/conda.py
    M lib/galaxy/tools/parameters/basic.py
    M lib/galaxy/tools/parameters/output_collect.py
    M lib/galaxy/tools/parser/output_actions.py
    M lib/galaxy/tools/parser/output_collection_def.py
    M lib/galaxy/tools/test.py
    M lib/galaxy/tools/toolbox/base.py
    M lib/galaxy/tools/toolbox/panel.py
    M lib/galaxy/tools/toolbox/watcher.py
    M lib/galaxy/tools/wrappers.py
    M lib/galaxy/util/object_wrapper.py
    M lib/galaxy/util/pastescript/loadwsgi.py
    M lib/galaxy/visualization/genomes.py
    M lib/galaxy/web/framework/openid_manager.py
    M lib/galaxy/web/framework/webapp.py
    M lib/galaxy/webapps/galaxy/api/lda_datasets.py
    M lib/galaxy/webapps/galaxy/api/remote_files.py
    M lib/galaxy/webapps/galaxy/controllers/library_common.py
    M lib/galaxy/webapps/galaxy/controllers/user.py
    M lib/galaxy/webapps/tool_shed/controllers/repository.py
    M lib/galaxy/workflow/extract.py
    M lib/pulsar/client/amqp_exchange.py
    M lib/tool_shed/scripts/check_repositories_for_functional_tests.py
    M lib/tool_shed/util/metadata_util.py
    M lib/tool_shed/util/shed_util_common.py
    M requirements.txt
    M run.sh
    M run_tests.sh
    M scripts/binary_compatibility.py
    M scripts/cleanup_datasets/admin_cleanup_datasets.py
    M scripts/common_startup.sh
    M static/maps/layout/menu.js.map
    M static/maps/mvc/collection/list-collection-creator.js.map
    M static/maps/mvc/form/form-data.js.map
    M static/maps/mvc/form/form-input.js.map
    M static/maps/mvc/form/form-parameters.js.map
    M static/maps/mvc/form/form-repeat.js.map
    M static/maps/mvc/form/form-view.js.map
    M static/maps/mvc/history/history-view-edit.js.map
    M static/maps/mvc/library/library-foldertoolbar-view.js.map
    M static/maps/mvc/tool/tool-form-workflow.js.map
    M static/maps/mvc/ui/ui-list.js.map
    M static/maps/mvc/ui/ui-misc.js.map
    M static/maps/mvc/upload/default/default-row.js.map
    M static/maps/mvc/upload/upload-settings.js.map
    M static/maps/mvc/workflow/workflow-view.js.map
    M static/maps/utils/utils.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/layout/menu.js
    M static/scripts/mvc/collection/list-collection-creator.js
    M static/scripts/mvc/form/form-data.js
    M static/scripts/mvc/form/form-input.js
    M static/scripts/mvc/form/form-parameters.js
    M static/scripts/mvc/form/form-repeat.js
    M static/scripts/mvc/form/form-view.js
    M static/scripts/mvc/history/history-view-edit.js
    M static/scripts/mvc/library/library-foldertoolbar-view.js
    M static/scripts/mvc/tool/tool-form-workflow.js
    M static/scripts/mvc/ui/ui-list.js
    M static/scripts/mvc/ui/ui-misc.js
    M static/scripts/mvc/upload/default/default-row.js
    M static/scripts/mvc/upload/upload-settings.js
    M static/scripts/mvc/workflow/workflow-view.js
    M static/scripts/utils/utils.js
    M static/style/blue/base.css
    M templates/webapps/reports/jobs_errors_per_tool.mako
    M templates/webapps/reports/jobs_per_month_all.mako
    M templates/webapps/reports/jobs_per_month_in_error.mako
    M templates/webapps/reports/jobs_per_tool.mako
    M templates/webapps/reports/jobs_per_user.mako
    M templates/webapps/reports/jobs_specified_month_all.mako
    M templates/webapps/reports/jobs_specified_month_in_error.mako
    M templates/webapps/reports/jobs_tool_per_month.mako
    M templates/webapps/reports/jobs_user_per_month.mako
    M templates/webapps/reports/registered_users_per_month.mako
    M templates/webapps/reports/requests_user_per_month.mako
    M templates/webapps/reports/users_last_access_date.mako
    M templates/webapps/reports/users_user_disk_usage.mako
    M templates/webapps/reports/workflows_per_month_all.mako
    M templates/webapps/reports/workflows_per_user.mako
    M templates/webapps/reports/workflows_per_workflow.mako
    M templates/webapps/reports/workflows_user_per_month.mako
    M test/api/helpers.py
    M test/api/test_tools.py
    M test/casperjs/casperjs_runner.py
    M test/casperjs/modules/user.js
    M test/functional/test_toolbox.py
    M test/functional/tools/output_action_change_format.xml
    M test/qunit/tests/masthead_tests.js
    A test/qunit/tests/ui_tests.html
    A test/qunit/tests/ui_tests.js
    M test/unit/jobs/test_command_factory.py
    M test/unit/jobs/test_runner_local.py
    M test/unit/tools/test_collect_primary_datasets.py
    M test/unit/tools/test_execution.py
    M test/unit/unittest_utils/galaxy_mock.py
    A test/unit/web/framework/__init__.py
    A test/unit/web/framework/test_webapp.py

  Log Message:
  -----------
  (merge dev)

  Commit: 91f1a65cb1495993355c473e858195ae07a6f3b7
      https://github.com/galaxyproject/galaxy/commit/91f1a65cb1495993355c473e85819...
  Author: Aysam Guerler <aysam.guerler@gmail.com>
  Date:   2016-01-15 (Fri, 15 Jan 2016)

  Changed paths:
    M client/galaxy/scripts/mvc/base-mvc.js
    M client/galaxy/scripts/mvc/collection/collection-li-edit.js
    M client/galaxy/scripts/mvc/collection/collection-li.js
    M client/galaxy/scripts/mvc/collection/collection-model.js
    M client/galaxy/scripts/mvc/collection/collection-view-edit.js
    M client/galaxy/scripts/mvc/collection/collection-view.js
    M client/galaxy/scripts/mvc/collection/list-collection-creator.js
    M client/galaxy/scripts/mvc/collection/list-of-pairs-collection-creator.js
    M client/galaxy/scripts/mvc/collection/pair-collection-creator.js
    M client/galaxy/scripts/mvc/dataset/dataset-choice.js
    M client/galaxy/scripts/mvc/dataset/dataset-li-edit.js
    M client/galaxy/scripts/mvc/dataset/dataset-li.js
    M client/galaxy/scripts/mvc/dataset/dataset-list.js
    M client/galaxy/scripts/mvc/dataset/dataset-model.js
    M client/galaxy/scripts/mvc/dataset/states.js
    M client/galaxy/scripts/mvc/history/copy-dialog.js
    M client/galaxy/scripts/mvc/history/hda-li-edit.js
    M client/galaxy/scripts/mvc/history/hda-li.js
    M client/galaxy/scripts/mvc/history/hda-model.js
    M client/galaxy/scripts/mvc/history/hdca-li-edit.js
    M client/galaxy/scripts/mvc/history/hdca-li.js
    M client/galaxy/scripts/mvc/history/hdca-model.js
    M client/galaxy/scripts/mvc/history/history-content-model.js
    M client/galaxy/scripts/mvc/history/history-contents.js
    M client/galaxy/scripts/mvc/history/history-model.js
    M client/galaxy/scripts/mvc/history/history-structure-view.js
    M client/galaxy/scripts/mvc/history/history-view-annotated.js
    M client/galaxy/scripts/mvc/history/history-view-edit-current.js
    M client/galaxy/scripts/mvc/history/history-view-edit.js
    M client/galaxy/scripts/mvc/history/history-view.js
    M client/galaxy/scripts/mvc/history/job-dag.js
    M client/galaxy/scripts/mvc/history/multi-panel.js
    M client/galaxy/scripts/mvc/history/options-menu.js
    M client/galaxy/scripts/mvc/list/list-item.js
    M client/galaxy/scripts/mvc/list/list-view.js
    M client/galaxy/scripts/mvc/user/user-model.js
    M client/galaxy/scripts/mvc/user/user-quotameter.js
    M static/maps/mvc/base-mvc.js.map
    M static/maps/mvc/collection/collection-li-edit.js.map
    M static/maps/mvc/collection/collection-li.js.map
    M static/maps/mvc/collection/collection-model.js.map
    M static/maps/mvc/collection/collection-view-edit.js.map
    M static/maps/mvc/collection/collection-view.js.map
    M static/maps/mvc/collection/list-collection-creator.js.map
    M static/maps/mvc/collection/list-of-pairs-collection-creator.js.map
    M static/maps/mvc/collection/pair-collection-creator.js.map
    M static/maps/mvc/dataset/dataset-choice.js.map
    M static/maps/mvc/dataset/dataset-li-edit.js.map
    M static/maps/mvc/dataset/dataset-li.js.map
    M static/maps/mvc/dataset/dataset-list.js.map
    M static/maps/mvc/dataset/dataset-model.js.map
    M static/maps/mvc/dataset/states.js.map
    M static/maps/mvc/history/copy-dialog.js.map
    M static/maps/mvc/history/hda-li-edit.js.map
    M static/maps/mvc/history/hda-li.js.map
    M static/maps/mvc/history/hda-model.js.map
    M static/maps/mvc/history/hdca-li-edit.js.map
    M static/maps/mvc/history/hdca-li.js.map
    M static/maps/mvc/history/hdca-model.js.map
    M static/maps/mvc/history/history-content-model.js.map
    M static/maps/mvc/history/history-contents.js.map
    M static/maps/mvc/history/history-model.js.map
    M static/maps/mvc/history/history-structure-view.js.map
    M static/maps/mvc/history/history-view-annotated.js.map
    M static/maps/mvc/history/history-view-edit-current.js.map
    M static/maps/mvc/history/history-view-edit.js.map
    M static/maps/mvc/history/history-view.js.map
    M static/maps/mvc/history/job-dag.js.map
    M static/maps/mvc/history/multi-panel.js.map
    M static/maps/mvc/history/options-menu.js.map
    M static/maps/mvc/list/list-item.js.map
    M static/maps/mvc/list/list-view.js.map
    M static/maps/mvc/user/user-model.js.map
    M static/maps/mvc/user/user-quotameter.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/mvc/base-mvc.js
    M static/scripts/mvc/collection/collection-li-edit.js
    M static/scripts/mvc/collection/collection-li.js
    M static/scripts/mvc/collection/collection-model.js
    M static/scripts/mvc/collection/collection-view-edit.js
    M static/scripts/mvc/collection/collection-view.js
    M static/scripts/mvc/collection/list-collection-creator.js
    M static/scripts/mvc/collection/list-of-pairs-collection-creator.js
    M static/scripts/mvc/collection/pair-collection-creator.js
    M static/scripts/mvc/dataset/dataset-choice.js
    M static/scripts/mvc/dataset/dataset-li-edit.js
    M static/scripts/mvc/dataset/dataset-li.js
    M static/scripts/mvc/dataset/dataset-list.js
    M static/scripts/mvc/dataset/dataset-model.js
    M static/scripts/mvc/dataset/states.js
    M static/scripts/mvc/history/hda-li-edit.js
    M static/scripts/mvc/history/hda-li.js
    M static/scripts/mvc/history/hda-model.js
    M static/scripts/mvc/history/hdca-li-edit.js
    M static/scripts/mvc/history/hdca-li.js
    M static/scripts/mvc/history/hdca-model.js
    M static/scripts/mvc/history/history-content-model.js
    M static/scripts/mvc/history/history-contents.js
    M static/scripts/mvc/history/history-model.js
    M static/scripts/mvc/history/history-structure-view.js
    M static/scripts/mvc/history/history-view-annotated.js
    M static/scripts/mvc/history/history-view-edit-current.js
    M static/scripts/mvc/history/history-view-edit.js
    M static/scripts/mvc/history/history-view.js
    M static/scripts/mvc/history/job-dag.js
    M static/scripts/mvc/history/multi-panel.js
    M static/scripts/mvc/list/list-item.js
    M static/scripts/mvc/list/list-view.js
    M static/scripts/mvc/user/user-model.js
    M static/scripts/mvc/user/user-quotameter.js

  Log Message:
  -----------
  Merge pull request #1522 from carlfeberhard/history.iteration

History UI: clean up.

Compare: https://github.com/galaxyproject/galaxy/compare/49a72dacc678...91f1a65cb149

[galaxy-commits] [galaxyproject/galaxy] adb577: UI: use strict and replace leaky uses of Backbone....

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