[galaxy-commits] [galaxyproject/galaxy] 325863: Add histories route to analaysis app

20 Jun 2017


      Branch: refs/heads/dev
  Home:   https://github.com/galaxyproject/galaxy
  Commit: 3258635c159acfa3cd4ab33e1484b20b9bced9c1
      https://github.com/galaxyproject/galaxy/commit/3258635c159acfa3cd4ab33e1484b...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-06-07 (Wed, 07 Jun 2017)

  Changed paths:
    M client/galaxy/scripts/apps/analysis.js

  Log Message:
  -----------
  Add histories route to analaysis app


  Commit: 0fa6f144d013ecac7bcd268f100b07c2c7811ffe
      https://github.com/galaxyproject/galaxy/commit/0fa6f144d013ecac7bcd268f100b0...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-06-07 (Wed, 07 Jun 2017)

  Changed paths:
    M client/galaxy/scripts/layout/menu.js
    M static/maps/layout/menu.js.map
    M static/scripts/layout/menu.js

  Log Message:
  -----------
  Redirect masthead link


  Commit: 15206d1dec8547b0ee23a5f8412478f79a6689e0
      https://github.com/galaxyproject/galaxy/commit/15206d1dec8547b0ee23a5f841247...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-06-07 (Wed, 07 Jun 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/buildapp.py

  Log Message:
  -----------
  Add client route to backend app


  Commit: 6af0126e60fcffc8afa3d57c8a1d9490822bdfa4
      https://github.com/galaxyproject/galaxy/commit/6af0126e60fcffc8afa3d57c8a1d9...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-06-07 (Wed, 07 Jun 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/history.py

  Log Message:
  -----------
  Change controller response from mako to json


  Commit: 658483ba5e50516d3bbef8f22411534a483a1aa6
      https://github.com/galaxyproject/galaxy/commit/658483ba5e50516d3bbef8f224115...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-06-07 (Wed, 07 Jun 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/history.py
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/bundled/login.bundled.js
    M static/scripts/bundled/login.bundled.js.map

  Log Message:
  -----------
  Fix refresh handler


  Commit: 23d086a9894d6ea67bf19ca0f74147f62e76c801
      https://github.com/galaxyproject/galaxy/commit/23d086a9894d6ea67bf19ca0f7414...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-06-07 (Wed, 07 Jun 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/history.py

  Log Message:
  -----------
  Fix sharing operation


  Commit: d7d33323952d81352259bc745d749b8583a3cd16
      https://github.com/galaxyproject/galaxy/commit/d7d33323952d81352259bc745d749...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-06-07 (Wed, 07 Jun 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/history.py

  Log Message:
  -----------
  Remove custom mako name from definition


  Commit: 9ed0326b150e71b781994c4d2def42f71fdb48d0
      https://github.com/galaxyproject/galaxy/commit/9ed0326b150e71b781994c4d2def4...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-06-07 (Wed, 07 Jun 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/history.py

  Log Message:
  -----------
  Fix rename operation


  Commit: c987e5fa375ce66f383482a7b30c23e71610d2a2
      https://github.com/galaxyproject/galaxy/commit/c987e5fa375ce66f383482a7b30c2...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-06-07 (Wed, 07 Jun 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/history.py

  Log Message:
  -----------
  Revise view operation


  Commit: 843ed9e6a9d2f7545919b71b057068ffb52f4d01
      https://github.com/galaxyproject/galaxy/commit/843ed9e6a9d2f7545919b71b05706...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-06-07 (Wed, 07 Jun 2017)

  Changed paths:
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/bundled/login.bundled.js
    M static/scripts/bundled/login.bundled.js.map

  Log Message:
  -----------
  Pack


  Commit: 49ae97d3a368d1352f591a8d5a6bde96307af27d
      https://github.com/galaxyproject/galaxy/commit/49ae97d3a368d1352f591a8d5a6bd...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-06-07 (Wed, 07 Jun 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/history.py

  Log Message:
  -----------
  Remove uncommented copy statement


  Commit: 0fb1059bf74bbd4ba7f12cdd0f1104141242290b
      https://github.com/galaxyproject/galaxy/commit/0fb1059bf74bbd4ba7f12cdd0f110...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-06-07 (Wed, 07 Jun 2017)

  Changed paths:
    M client/galaxy/scripts/apps/analysis.js
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    R templates/webapps/galaxy/history/grid.mako
    R templates/webapps/galaxy/history/grid_js.mako

  Log Message:
  -----------
  Insert custom history-list view to accomodate copy dialog hack


  Commit: 01cab673e7dcca0e7d463e3aa4982e49fa632e27
      https://github.com/galaxyproject/galaxy/commit/01cab673e7dcca0e7d463e3aa4982...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-06-07 (Wed, 07 Jun 2017)

  Changed paths:
    A static/maps/mvc/history/history-list.js.map
    A static/scripts/mvc/history/history-list.js

  Log Message:
  -----------
  Add packed files


  Commit: e3a4bf5d9ed02fe22a6732637511490d0a086f8d
      https://github.com/galaxyproject/galaxy/commit/e3a4bf5d9ed02fe22a67326375114...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-06-07 (Wed, 07 Jun 2017)

  Changed paths:
    A client/galaxy/scripts/mvc/history/history-list.js

  Log Message:
  -----------
  Add history list module


  Commit: 84adc659bc67b6b65206ad7f9e9ee10916237f30
      https://github.com/galaxyproject/galaxy/commit/84adc659bc67b6b65206ad7f9e9ee...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-06-07 (Wed, 07 Jun 2017)

  Changed paths:
    M client/galaxy/scripts/mvc/grid/grid-view.js
    M client/galaxy/scripts/mvc/history/history-list.js
    M static/maps/mvc/grid/grid-view.js.map
    M static/maps/mvc/history/history-list.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/mvc/grid/grid-view.js
    M static/scripts/mvc/history/history-list.js

  Log Message:
  -----------
  Augment grid view event handler to allow custom client side operations


  Commit: d931df2ca9d107d07af1c97a3d5de326f8ef378b
      https://github.com/galaxyproject/galaxy/commit/d931df2ca9d107d07af1c97a3d5de...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-06-07 (Wed, 07 Jun 2017)

  Changed paths:
    M client/galaxy/scripts/mvc/history/history-list.js
    M static/maps/mvc/history/history-list.js.map
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/mvc/history/history-list.js

  Log Message:
  -----------
  Reimplement copy operation


  Commit: c3305581426fc2b344499079a5f94a65c9f5400a
      https://github.com/galaxyproject/galaxy/commit/c3305581426fc2b344499079a5f94...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-06-07 (Wed, 07 Jun 2017)

  Changed paths:
    M client/galaxy/scripts/mvc/history/options-menu.js
    M static/maps/mvc/history/options-menu.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/mvc/history/options-menu.js

  Log Message:
  -----------
  Reroute link form history panel to saved grids


  Commit: 72d038504128a5b8e7ce721375b254b18805c450
      https://github.com/galaxyproject/galaxy/commit/72d038504128a5b8e7ce721375b25...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-06-07 (Wed, 07 Jun 2017)

  Changed paths:
    M client/galaxy/scripts/mvc/history/options-menu.js
    M static/maps/mvc/history/options-menu.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/mvc/history/options-menu.js

  Log Message:
  -----------
  Fix target handling


  Commit: b9461eba40fbc3e8d3129fff94b954f2618c5ddf
      https://github.com/galaxyproject/galaxy/commit/b9461eba40fbc3e8d3129fff94b95...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-06-13 (Tue, 13 Jun 2017)

  Changed paths:
    M client/galaxy/scripts/apps/analysis.js
    M client/galaxy/scripts/layout/menu.js
    M client/galaxy/scripts/mvc/grid/grid-view.js
    A client/galaxy/scripts/mvc/page/page-list.js
    M config/datatypes_conf.xml.sample
    M config/galaxy.ini.sample
    M config/job_conf.xml.sample_advanced
    M lib/galaxy/config.py
    M lib/galaxy/datatypes/data.py
    A lib/galaxy/datatypes/plant_tribes.py
    M lib/galaxy/datatypes/text.py
    M lib/galaxy/tools/deps/conda_util.py
    M lib/galaxy/tools/deps/container_resolvers/mulled.py
    M lib/galaxy/tools/deps/containers.py
    M lib/galaxy/tools/deps/docker_util.py
    M lib/galaxy/tools/deps/mulled/invfile.lua
    M lib/galaxy/tools/deps/mulled/mulled_build.py
    M lib/galaxy/tools/deps/mulled/mulled_build_channel.py
    M lib/galaxy/tools/deps/mulled/mulled_build_files.py
    M lib/galaxy/tools/deps/mulled/mulled_search.py
    M lib/galaxy/tools/deps/mulled/util.py
    A lib/galaxy/tools/deps/singularity_util.py
    M lib/galaxy/web/framework/helpers/grids.py
    M lib/galaxy/webapps/galaxy/buildapp.py
    M lib/galaxy/webapps/galaxy/controllers/dataset.py
    M lib/galaxy/webapps/galaxy/controllers/page.py
    M static/maps/layout/menu.js.map
    M static/maps/mvc/grid/grid-view.js.map
    A static/maps/mvc/page/page-list.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/layout/menu.js
    M static/scripts/mvc/grid/grid-view.js
    A static/scripts/mvc/page/page-list.js
    M templates/sharing_base.mako
    R templates/webapps/galaxy/dataset/grid.mako
    M templates/webapps/galaxy/page/editor.mako
    R templates/webapps/galaxy/page/index.mako
    A test/functional/tools/mulled_example_multi_versionless.xml
    M test/functional/tools/samples_tool_conf.xml

  Log Message:
  -----------
  Merge branch 'dev' into grid_histories


  Commit: c2ebb5776bc26d62179fbc7ffe07bb7bec4288cf
      https://github.com/galaxyproject/galaxy/commit/c2ebb5776bc26d62179fbc7ffe07b...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-06-14 (Wed, 14 Jun 2017)

  Changed paths:
    M client/galaxy/scripts/apps/analysis.js
    M lib/galaxy/webapps/galaxy/buildapp.py
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js.map

  Log Message:
  -----------
  Use explicit routes


  Commit: 434d944e5da46cf889b74a6759f3cce88c2f6aa4
      https://github.com/galaxyproject/galaxy/commit/434d944e5da46cf889b74a6759f3c...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-06-14 (Wed, 14 Jun 2017)

  Changed paths:
    M .gitignore
    M client/galaxy/scripts/layout/menu.js
    M client/galaxy/scripts/mvc/tool/tool-form-base.js
    M client/galaxy/scripts/mvc/tool/tool-form-composite.js
    M client/galaxy/scripts/mvc/tool/tool-form.js
    M client/galaxy/scripts/mvc/webhooks.js
    M client/galaxy/scripts/onload.js
    M config/plugins/webhooks/demo/tool_list/helper/__init__.py
    A config/plugins/webhooks/demo/tour_generator/config/tour_generator.yml
    A config/plugins/webhooks/demo/tour_generator/helper/__init__.py
    A config/plugins/webhooks/demo/tour_generator/static/script.js
    A config/plugins/webhooks/demo/tour_generator/static/styles.css
    M cron/updateucsc.sh.sample
    M lib/galaxy/tools/deps/container_resolvers/mulled.py
    M lib/galaxy/tools/deps/containers.py
    M lib/galaxy/tools/deps/mulled/invfile.lua
    M lib/galaxy/tools/deps/mulled/mulled_build.py
    M lib/galaxy/tools/deps/mulled/mulled_build_files.py
    M lib/galaxy/tools/deps/mulled/mulled_build_tool.py
    M lib/galaxy/webapps/galaxy/api/webhooks.py
    M static/maps/layout/menu.js.map
    M static/maps/mvc/tool/tool-form-base.js.map
    M static/maps/mvc/tool/tool-form-composite.js.map
    M static/maps/mvc/tool/tool-form.js.map
    M static/maps/mvc/webhooks.js.map
    M static/maps/onload.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/layout/menu.js
    M static/scripts/mvc/tool/tool-form-base.js
    M static/scripts/mvc/tool/tool-form-composite.js
    M static/scripts/mvc/tool/tool-form.js
    M static/scripts/mvc/webhooks.js
    M static/scripts/onload.js
    M templates/js-app.mako
    M test/functional/webhooks/phdcomics/helper/__init__.py
    M test/functional/webhooks/trans_object/helper/__init__.py

  Log Message:
  -----------
  Merge branch 'dev' into grid_histories


  Commit: 6a0401e08ebce9797901812c57d7fca69a887c0b
      https://github.com/galaxyproject/galaxy/commit/6a0401e08ebce9797901812c57d7f...
  Author: Dannon Baker <dannon.baker@gmail.com>
  Date:   2017-06-20 (Tue, 20 Jun 2017)

  Changed paths:
    M client/galaxy/scripts/apps/analysis.js
    M client/galaxy/scripts/layout/menu.js
    M client/galaxy/scripts/mvc/grid/grid-view.js
    A client/galaxy/scripts/mvc/history/history-list.js
    M client/galaxy/scripts/mvc/history/options-menu.js
    M lib/galaxy/webapps/galaxy/buildapp.py
    M lib/galaxy/webapps/galaxy/controllers/history.py
    M static/maps/layout/menu.js.map
    M static/maps/mvc/grid/grid-view.js.map
    A static/maps/mvc/history/history-list.js.map
    M static/maps/mvc/history/options-menu.js.map
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/bundled/login.bundled.js.map
    M static/scripts/layout/menu.js
    M static/scripts/mvc/grid/grid-view.js
    A static/scripts/mvc/history/history-list.js
    M static/scripts/mvc/history/options-menu.js
    R templates/webapps/galaxy/history/grid.mako
    R templates/webapps/galaxy/history/grid_js.mako

  Log Message:
  -----------
  Merge pull request #4167 from guerler/grid_histories

Remove histories grid mako


Compare: https://github.com/galaxyproject/galaxy/compare/89851e4c7154...6a0401e08ebc

[galaxy-commits] [galaxyproject/galaxy] 325863: Add histories route to analaysis app

GitHub