Branch: refs/heads/release_18.05 Home: https://github.com/galaxyproject/galaxy Commit: fb291eb530858c79c83be10502d4b78b585d77cb https://github.com/galaxyproject/galaxy/commit/fb291eb530858c79c83be10502d4b... Author: E Rasche <hxr@hx42.org> Date: 2018-04-19 (Thu, 19 Apr 2018) Changed paths: M lib/galaxy/jobs/runners/util/job_script/DEFAULT_JOB_FILE_TEMPLATE.sh Log Message: ----------- check memory later Commit: 765a834497ebfc555ac0de98cbbae9ad395f1c49 https://github.com/galaxyproject/galaxy/commit/765a834497ebfc555ac0de98cbbae... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-05-07 (Mon, 07 May 2018) Changed paths: M lib/galaxy/jobs/runners/util/job_script/DEFAULT_JOB_FILE_TEMPLATE.sh Log Message: ----------- Memory statement and cd both before instrument_pre_commands Commit: 1343b04380b048dd75264c2ed9fb2ae7ca820d00 https://github.com/galaxyproject/galaxy/commit/1343b04380b048dd75264c2ed9fb2... Author: mvdbeek <m.vandenbeek@gmail.com> Date: 2018-05-08 (Tue, 08 May 2018) Changed paths: M client/galaxy/scripts/mvc/workflow/workflow-node.js M lib/galaxy/webapps/galaxy/api/workflows.py Log Message: ----------- Fix workflow step cloning Problem one is that passing the tool_state as the input payload doesn't preserve the tool state, adressed with the client-part fix. Then passing the tool state still has no effect since the state is properly recovered in `module_factory.from_dict`, but then overwritten by recovering the state starting with an empty dict. It looks like this isn't necessary as we call populate_state anyway when calling `module.get_config_form()`. Fixes https://github.com/galaxyproject/galaxy/issues/5879. Commit: 098f638d26355abe54c83bd43b8daf1078e1ccd3 https://github.com/galaxyproject/galaxy/commit/098f638d26355abe54c83bd43b8da... Author: Martin Cech <marten@bx.psu.edu> Date: 2018-05-08 (Tue, 08 May 2018) Changed paths: M lib/galaxy/jobs/runners/util/job_script/DEFAULT_JOB_FILE_TEMPLATE.sh Log Message: ----------- Merge pull request #5925 from erasche/cd-before-metrics [18.01] jobscript - check memory later Commit: 4f20aee2189218cfead67d0153cd579d5674d3eb https://github.com/galaxyproject/galaxy/commit/4f20aee2189218cfead67d0153cd5... Author: mvdbeek <m.vandenbeek@gmail.com> Date: 2018-05-09 (Wed, 09 May 2018) Changed paths: M static/maps/mvc/collection/list-of-pairs-collection-creator.js.map M static/maps/mvc/workflow/workflow-node.js.map M static/scripts/bundled/extended.bundled.js M static/scripts/bundled/extended.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/workflow/workflow-node.js Log Message: ----------- Rebuild client for workflow step copy fix Commit: 5fa450dc9b9826ffc0bd0a3552a586a2dfcbb859 https://github.com/galaxyproject/galaxy/commit/5fa450dc9b9826ffc0bd0a3552a58... Author: mvdbeek <m.vandenbeek@gmail.com> Date: 2018-05-09 (Wed, 09 May 2018) Changed paths: M lib/galaxy/webapps/galaxy/api/workflows.py Log Message: ----------- Restore `populate_state`, but only execute if `tool_state` not given Commit: 250973eb46fc69baa6e8018c5f6e6e9552edd877 https://github.com/galaxyproject/galaxy/commit/250973eb46fc69baa6e8018c5f6e6... Author: Dannon <dannon.baker@gmail.com> Date: 2018-05-09 (Wed, 09 May 2018) Changed paths: M client/galaxy/scripts/mvc/workflow/workflow-node.js M lib/galaxy/webapps/galaxy/api/workflows.py M static/maps/mvc/collection/list-of-pairs-collection-creator.js.map M static/maps/mvc/workflow/workflow-node.js.map M static/scripts/bundled/extended.bundled.js M static/scripts/bundled/extended.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/workflow/workflow-node.js Log Message: ----------- Merge pull request #6085 from mvdbeek/fix_workflow_step_cloning [18.01] Fix workflow step cloning Commit: ef7d90a3dec1c0e517a196999d892b34af6896d1 https://github.com/galaxyproject/galaxy/commit/ef7d90a3dec1c0e517a196999d892... Author: Nicola Soranzo <nicola.soranzo@earlham.ac.uk> Date: 2018-05-10 (Thu, 10 May 2018) Changed paths: M client/galaxy/scripts/mvc/workflow/workflow-node.js M lib/galaxy/jobs/runners/util/job_script/DEFAULT_JOB_FILE_TEMPLATE.sh M lib/galaxy/webapps/galaxy/api/workflows.py Log Message: ----------- Merge branch 'release_18.01' into release_18.05 Compare: https://github.com/galaxyproject/galaxy/compare/63abfd657a38...ef7d90a3dec1 **NOTE:** This service been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.