[galaxy-commits] [galaxyproject/galaxy] 37a6c4: Remove unused template

11 Aug 2017


      Branch: refs/heads/dev
  Home:   https://github.com/galaxyproject/galaxy
  Commit: 37a6c488b0cb99450e2781656eee2462bf539900
      https://github.com/galaxyproject/galaxy/commit/37a6c488b0cb99450e2781656eee2...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-07-29 (Sat, 29 Jul 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/admin.py

  Log Message:
  -----------
  Remove unused template


  Commit: 4ccb3e3874e0548289d746fee03a96250df9f1e3
      https://github.com/galaxyproject/galaxy/commit/4ccb3e3874e0548289d746fee03a9...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-07-29 (Sat, 29 Jul 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/admin.py

  Log Message:
  -----------
  Return roles grid as dictionary


  Commit: 6c91bc287ef0846869f1604d2ebfd684fb550df4
      https://github.com/galaxyproject/galaxy/commit/6c91bc287ef0846869f1604d2ebfd...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-07-29 (Sat, 29 Jul 2017)

  Changed paths:
    M client/galaxy/scripts/apps/admin.js
    M lib/galaxy/webapps/galaxy/buildapp.py
    M lib/galaxy/webapps/galaxy/controllers/admin.py
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/bundled/login.bundled.js
    M static/scripts/bundled/login.bundled.js.map

  Log Message:
  -----------
  Add client side routes


  Commit: b8396a961facd7dada8d8db837386b656855c3b1
      https://github.com/galaxyproject/galaxy/commit/b8396a961facd7dada8d8db837386...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-07-30 (Sun, 30 Jul 2017)

  Changed paths:
    M client/galaxy/scripts/apps/panels/admin-panel.js
    M lib/galaxy/webapps/galaxy/controllers/admin.py
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/bundled/login.bundled.js
    M static/scripts/bundled/login.bundled.js.map

  Log Message:
  -----------
  Add admin role editing options


  Commit: 00432345ff20bbcf5023995b6cfb54937eb4be9e
      https://github.com/galaxyproject/galaxy/commit/00432345ff20bbcf5023995b6cfb5...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-07-31 (Mon, 31 Jul 2017)

  Changed paths:
    M lib/tool_shed/util/admin_util.py
    M templates/admin/user/reset_password.mako
    M templates/admin/user/user.mako

  Log Message:
  -----------
  Merge branch 'revise_page' into admin_grid_roles


  Commit: d7717cfa8b8562d82742ba285d54e7d7ab794d2d
      https://github.com/galaxyproject/galaxy/commit/d7717cfa8b8562d82742ba285d54e...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-07-31 (Mon, 31 Jul 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/admin.py

  Log Message:
  -----------
  Remove unused galaxy role grid operations


  Commit: 8ee4c29a0579b2a9156f0cd4a70139758ed58b60
      https://github.com/galaxyproject/galaxy/commit/8ee4c29a0579b2a9156f0cd4a7013...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-01 (Tue, 01 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/apps/admin.js
    M client/galaxy/scripts/apps/analysis.js
    M client/galaxy/scripts/apps/panels/admin-panel.js
    M client/galaxy/scripts/galaxy.js
    M client/galaxy/scripts/layout/router.js
    A client/galaxy/scripts/mvc/dataset/dataset-edit-attributes.js
    M client/galaxy/scripts/mvc/dataset/dataset-li-edit.js
    M client/galaxy/scripts/mvc/grid/grid-view.js
    M client/galaxy/scripts/nls/fr/locale.js
    M config/tool_shed.ini.sample
    M lib/galaxy/dependencies/pinned-requirements.txt
    M lib/galaxy/jobs/runners/cli.py
    M lib/galaxy/model/mapping.py
    M lib/galaxy/model/metadata.py
    M lib/galaxy/security/__init__.py
    M lib/galaxy/web/base/controller.py
    M lib/galaxy/webapps/galaxy/api/quotas.py
    M lib/galaxy/webapps/galaxy/buildapp.py
    M lib/galaxy/webapps/galaxy/controllers/admin.py
    M lib/galaxy/webapps/galaxy/controllers/dataset.py
    M lib/galaxy/webapps/galaxy/controllers/root.py
    M lib/galaxy/webapps/tool_shed/buildapp.py
    M lib/galaxy/workflow/modules.py
    M static/maps/galaxy.js.map
    M static/maps/layout/router.js.map
    A static/maps/mvc/dataset/dataset-edit-attributes.js.map
    M static/maps/mvc/dataset/dataset-li-edit.js.map
    M static/maps/mvc/grid/grid-view.js.map
    M static/maps/nls/fr/locale.js.map
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/bundled/login.bundled.js
    M static/scripts/bundled/login.bundled.js.map
    M static/scripts/galaxy.js
    M static/scripts/layout/router.js
    A static/scripts/mvc/dataset/dataset-edit-attributes.js
    M static/scripts/mvc/dataset/dataset-li-edit.js
    M static/scripts/mvc/grid/grid-view.js
    M static/scripts/nls/fr/locale.js
    R templates/webapps/galaxy/dataset/edit_attributes.mako

  Log Message:
  -----------
  Merge branch 'revise_page' into admin_grid_roles


  Commit: f76f9515a3b243bfb510f89aaa50e95a4990465f
      https://github.com/galaxyproject/galaxy/commit/f76f9515a3b243bfb510f89aaa50e...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-01 (Tue, 01 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/apps/admin.js
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/libs.bundled.js.map

  Log Message:
  -----------
  Parse url parameters for message handling


  Commit: e32661301cef0815fdd36743d1ab9901d2576ef2
      https://github.com/galaxyproject/galaxy/commit/e32661301cef0815fdd36743d1ab9...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-02 (Wed, 02 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/apps/analysis.js
    M client/galaxy/scripts/mvc/user/user-preferences.js
    R client/galaxy/scripts/mvc/workflow/workflow-configure-menu.js
    M client/galaxy/scripts/mvc/workflow/workflow.js
    M client/galaxy/style/less/base.less
    M config/plugins/webhooks/demo/search/static/script.js
    M lib/galaxy/tools/deps/conda_util.py
    M lib/galaxy/webapps/galaxy/api/workflows.py
    M lib/galaxy/webapps/galaxy/buildapp.py
    M static/maps/mvc/user/user-preferences.js.map
    M static/maps/mvc/workflow/workflow.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/mvc/user/user-preferences.js
    M static/scripts/mvc/workflow/workflow.js
    M static/style/blue/base.css

  Log Message:
  -----------
  Merge branch 'dev' into admin_grid_roles


  Commit: 77608ac4105ee90e3323d74e2273618fd2d06ca7
      https://github.com/galaxyproject/galaxy/commit/77608ac4105ee90e3323d74e22736...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-04 (Fri, 04 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/apps/admin.js
    M client/galaxy/scripts/apps/analysis.js
    M client/galaxy/scripts/layout/menu.js
    M client/galaxy/scripts/mvc/form/form-view.js
    A client/galaxy/scripts/mvc/form/form-wrapper.js
    M client/galaxy/scripts/mvc/grid/grid-template.js
    M client/galaxy/scripts/mvc/user/user-preferences.js
    M client/galaxy/scripts/mvc/workflow/workflow-forms.js
    M client/galaxy/scripts/mvc/workflow/workflow-view.js
    M client/galaxy/scripts/utils/query-string-parsing.js
    M config/datatypes_conf.xml.sample
    M lib/galaxy/datatypes/binary.py
    M lib/galaxy/datatypes/proteomics.py
    M lib/galaxy/jobs/actions/post.py
    M lib/galaxy/managers/tags.py
    M lib/galaxy/webapps/galaxy/buildapp.py
    M lib/galaxy/webapps/galaxy/controllers/admin.py
    M lib/tool_shed/grids/admin_grids.py
    M lib/tool_shed/util/admin_util.py
    M static/maps/layout/menu.js.map
    M static/maps/mvc/form/form-view.js.map
    A static/maps/mvc/form/form-wrapper.js.map
    M static/maps/mvc/grid/grid-template.js.map
    M static/maps/mvc/user/user-preferences.js.map
    M static/maps/mvc/workflow/workflow-forms.js.map
    M static/maps/mvc/workflow/workflow-view.js.map
    M static/maps/utils/query-string-parsing.js.map
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/bundled/login.bundled.js
    M static/scripts/bundled/login.bundled.js.map
    M static/scripts/layout/menu.js
    M static/scripts/mvc/form/form-view.js
    A static/scripts/mvc/form/form-wrapper.js
    M static/scripts/mvc/grid/grid-template.js
    M static/scripts/mvc/user/user-preferences.js
    M static/scripts/mvc/workflow/workflow-forms.js
    M static/scripts/mvc/workflow/workflow-view.js
    M static/scripts/utils/query-string-parsing.js
    R templates/admin/dataset_security/group/grid.mako
    R templates/admin/dataset_security/role/grid.mako
    R templates/admin/quota/grid.mako
    R templates/admin/tool_version/grid.mako
    R templates/admin/user/grid.mako
    R templates/admin/user/reset_password.mako
    R templates/admin/user/user.mako
    A templates/webapps/tool_shed/admin/user/reset_password.mako
    A templates/webapps/tool_shed/admin/user/user.mako
    R templates/webapps/tool_shed/repository/grid.mako

  Log Message:
  -----------
  Merge branch 'revise_grid_forms' into admin_grid_roles


  Commit: b46f4e4c84f042a3b668020d6767b6777e2babb4
      https://github.com/galaxyproject/galaxy/commit/b46f4e4c84f042a3b668020d6767b...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-04 (Fri, 04 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/apps/analysis.js
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js.map

  Log Message:
  -----------
  Remove unused routing message handler


  Commit: 44a339546b1849131b9c9f993aee332171217709
      https://github.com/galaxyproject/galaxy/commit/44a339546b1849131b9c9f993aee3...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-04 (Fri, 04 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/apps/panels/admin-panel.js
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/libs.bundled.js.map

  Log Message:
  -----------
  Fix menu link


  Commit: ffe3ac294d8a21a10546f45518e4d2c52e1bc966
      https://github.com/galaxyproject/galaxy/commit/ffe3ac294d8a21a10546f45518e4d...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-04 (Fri, 04 Aug 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/admin.py

  Log Message:
  -----------
  Do not parse empty messages


  Commit: 246e94ae8470e1ef78f1b136bcdc117f45e036ef
      https://github.com/galaxyproject/galaxy/commit/246e94ae8470e1ef78f1b136bcdc1...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-04 (Fri, 04 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/apps/admin.js
    M lib/galaxy/webapps/galaxy/controllers/admin.py
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/libs.bundled.js.map

  Log Message:
  -----------
  Build role renaming in client


  Commit: 20ce574e3304af6cb09d98b9d8e17a7ff7c3c628
      https://github.com/galaxyproject/galaxy/commit/20ce574e3304af6cb09d98b9d8e17...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-04 (Fri, 04 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/apps/admin.js
    M lib/galaxy/webapps/galaxy/controllers/admin.py

  Log Message:
  -----------
  Add role renaming feature to revised endpoint


  Commit: 99bf6809bebb621a33050164f2c7e2a2f203ae40
      https://github.com/galaxyproject/galaxy/commit/99bf6809bebb621a33050164f2c7e...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-04 (Fri, 04 Aug 2017)

  Changed paths:
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/libs.bundled.js.map

  Log Message:
  -----------
  Repack scripts


  Commit: 5ab9ea4ffdb7c5359d32a0653f6ac59d9fc37d21
      https://github.com/galaxyproject/galaxy/commit/5ab9ea4ffdb7c5359d32a0653f6ac...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-04 (Fri, 04 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/mvc/form/form-wrapper.js
    M static/maps/mvc/form/form-wrapper.js.map
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/bundled/login.bundled.js
    M static/scripts/bundled/login.bundled.js.map
    M static/scripts/mvc/form/form-wrapper.js

  Log Message:
  -----------
  Use primary button


  Commit: 4d542820e70d02c0809d3bd8482746b90e68642d
      https://github.com/galaxyproject/galaxy/commit/4d542820e70d02c0809d3bd848274...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-04 (Fri, 04 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/mvc/form/form-wrapper.js
    M lib/galaxy/webapps/galaxy/api/users.py
    M static/maps/mvc/form/form-wrapper.js.map
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/bundled/login.bundled.js
    M static/scripts/bundled/login.bundled.js.map
    M static/scripts/mvc/form/form-wrapper.js

  Log Message:
  -----------
  Remove unused messages, set default message status


  Commit: 502b2a068c06e190484fda2adcdc43ffef7d07e2
      https://github.com/galaxyproject/galaxy/commit/502b2a068c06e190484fda2adcdc4...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-04 (Fri, 04 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/apps/admin.js
    M client/galaxy/scripts/mvc/form/form-wrapper.js
    M client/galaxy/scripts/mvc/user/user-preferences.js
    M static/maps/mvc/form/form-wrapper.js.map
    M static/maps/mvc/user/user-preferences.js.map
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/bundled/login.bundled.js
    M static/scripts/bundled/login.bundled.js.map
    M static/scripts/mvc/form/form-wrapper.js
    M static/scripts/mvc/user/user-preferences.js

  Log Message:
  -----------
  Use redirect option for user preferences


  Commit: b908e98e37de20aff2b18acd6b93b79b9020f4a8
      https://github.com/galaxyproject/galaxy/commit/b908e98e37de20aff2b18acd6b93b...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-04 (Fri, 04 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/mvc/form/form-repeat.js
    M client/galaxy/scripts/mvc/form/form-wrapper.js
    M client/galaxy/scripts/mvc/tool/tool-form.js
    M client/galaxy/scripts/mvc/ui/ui-buttons.js
    M client/galaxy/style/less/ui.less
    M static/maps/mvc/form/form-repeat.js.map
    M static/maps/mvc/form/form-wrapper.js.map
    M static/maps/mvc/tool/tool-form.js.map
    M static/maps/mvc/ui/ui-buttons.js.map
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/bundled/login.bundled.js
    M static/scripts/bundled/login.bundled.js.map
    M static/scripts/mvc/form/form-repeat.js
    M static/scripts/mvc/form/form-wrapper.js
    M static/scripts/mvc/tool/tool-form.js
    M static/scripts/mvc/ui/ui-buttons.js
    M static/style/blue/base.css

  Log Message:
  -----------
  Fix button and operations floating handling


  Commit: bf6e2d26bd128e773ae3c604216e7b939abf8c01
      https://github.com/galaxyproject/galaxy/commit/bf6e2d26bd128e773ae3c604216e7...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-04 (Fri, 04 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/mvc/user/user-custom-builds.js
    M static/maps/mvc/user/user-custom-builds.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/mvc/user/user-custom-builds.js

  Log Message:
  -----------
  Fix floating for custom build form button


  Commit: afa6964994fb6aa6acad44d03f4123f2f7726839
      https://github.com/galaxyproject/galaxy/commit/afa6964994fb6aa6acad44d03f412...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-04 (Fri, 04 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/mvc/ui/ui-list.js
    M client/galaxy/style/less/ui.less
    M static/maps/mvc/ui/ui-list.js.map
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/mvc/ui/ui-list.js
    M static/style/blue/base.css

  Log Message:
  -----------
  Fix style for list parameter


  Commit: d11fc568a41a3dba540457f9d861182acfbae117
      https://github.com/galaxyproject/galaxy/commit/d11fc568a41a3dba540457f9d8611...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-04 (Fri, 04 Aug 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/admin.py
    M lib/tool_shed/galaxy_install/grids/admin_toolshed_grids.py
    M lib/tool_shed/grids/repository_grids.py
    R templates/admin/tool_shed_repository/grid.mako

  Log Message:
  -----------
  Merge branch 'revise_grid_forms' into admin_grid_roles


  Commit: 9d8bdc6f304d676157f8c0e5a76f6c49dd9e5d4b
      https://github.com/galaxyproject/galaxy/commit/9d8bdc6f304d676157f8c0e5a76f6...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-05 (Sat, 05 Aug 2017)

  Changed paths:
    M lib/galaxy/web/base/controller.py
    M static/maps/galaxy.js.map
    M static/scripts/galaxy.js

  Log Message:
  -----------
  Repack scripts


  Commit: 1675b9cca2cc1c5aa8a4e495e23c0877a781cf39
      https://github.com/galaxyproject/galaxy/commit/1675b9cca2cc1c5aa8a4e495e23c0...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-05 (Sat, 05 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/galaxy.js
    M client/galaxy/scripts/layout/menu.js
    M client/galaxy/scripts/mvc/user/user-preferences.js
    M lib/galaxy/jobs/rule_helper.py
    M lib/galaxy/model/__init__.py
    M lib/galaxy/tools/toolbox/base.py
    M lib/galaxy/web/base/controller.py
    M lib/galaxy/web/framework/webapp.py
    M lib/galaxy/webapps/galaxy/controllers/admin.py
    M lib/galaxy/webapps/galaxy/controllers/dataset.py
    M lib/galaxy/webapps/galaxy/controllers/user.py
    M static/maps/galaxy.js.map
    M static/maps/layout/menu.js.map
    M static/maps/mvc/user/user-preferences.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/galaxy.js
    M static/scripts/layout/menu.js
    M static/scripts/mvc/user/user-preferences.js
    M templates/galaxy_client_app.mako
    M templates/user/login.mako
    M templates/user/register.mako
    M templates/webapps/galaxy/history/display_structured.mako
    M templates/webapps/galaxy/workflow/build_from_current_history.mako
    M test/shed_functional/base/twilltestcase.py

  Log Message:
  -----------
  Merge branch 'revise_grid_forms' into admin_grid_roles


  Commit: d698d32ceb043fdb9820b68615748ca13e0825c8
      https://github.com/galaxyproject/galaxy/commit/d698d32ceb043fdb9820b68615748...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-07 (Mon, 07 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/apps/admin.js
    M lib/galaxy/webapps/galaxy/controllers/admin.py
    M static/maps/mvc/user/user-preferences.js.map
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/mvc/user/user-preferences.js

  Log Message:
  -----------
  Manage users and groups for role


  Commit: 9ee062bd4622481165d4cb1e783454a49fcdd704
      https://github.com/galaxyproject/galaxy/commit/9ee062bd4622481165d4cb1e78345...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-07 (Mon, 07 Aug 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/admin.py

  Log Message:
  -----------
  Show current name and description when renaming roles


  Commit: 183176a05c95e063a710ff469a368c463e18db2f
      https://github.com/galaxyproject/galaxy/commit/183176a05c95e063a710ff469a368...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-07 (Mon, 07 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/apps/admin.js
    M lib/galaxy/webapps/galaxy/controllers/admin.py
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/libs.bundled.js.map

  Log Message:
  -----------
  Add create role form


  Commit: 663c6c13975b01cf0472a083a68164d9bd010871
      https://github.com/galaxyproject/galaxy/commit/663c6c13975b01cf0472a083a6816...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-07 (Mon, 07 Aug 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/admin.py
    R templates/admin/dataset_security/role/role.mako
    R templates/admin/dataset_security/role/role_create.mako
    R templates/admin/dataset_security/role/role_rename.mako
    A templates/webapps/tool_shed/admin/dataset_security/role/role.mako
    A templates/webapps/tool_shed/admin/dataset_security/role/role_create.mako
    A templates/webapps/tool_shed/admin/dataset_security/role/role_rename.mako

  Log Message:
  -----------
  Fix boolean title, and move unused role makos to toolshed


  Commit: e77fd47b034e6af5b19756bd778f5081332e7c85
      https://github.com/galaxyproject/galaxy/commit/e77fd47b034e6af5b19756bd778f5...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-07 (Mon, 07 Aug 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/admin.py

  Log Message:
  -----------
  Fix boolean handling


  Commit: 419f3db64fb3614d5a70ed9a9eea8a260b6f5865
      https://github.com/galaxyproject/galaxy/commit/419f3db64fb3614d5a70ed9a9eea8...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-07 (Mon, 07 Aug 2017)

  Changed paths:
    M lib/tool_shed/util/admin_util.py

  Log Message:
  -----------
  Remove unused information feature for toolshed


  Commit: 733e225ec96b058dd159dda4e18ba1f7572573fd
      https://github.com/galaxyproject/galaxy/commit/733e225ec96b058dd159dda4e18ba...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-07 (Mon, 07 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/utils/query-string-parsing.js
    M static/maps/utils/query-string-parsing.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/utils/query-string-parsing.js

  Log Message:
  -----------
  Fix message handling in user preference main view


  Commit: a5d7c0fa84d8fe24fc94ac814b9f7502283de7c2
      https://github.com/galaxyproject/galaxy/commit/a5d7c0fa84d8fe24fc94ac814b9f7...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-07 (Mon, 07 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/mvc/form/form-wrapper.js
    M static/maps/mvc/form/form-wrapper.js.map
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/mvc/form/form-wrapper.js

  Log Message:
  -----------
  Scroll to highlight message


  Commit: 4b2eca373e936308b0550b9fabfc6494228b837a
      https://github.com/galaxyproject/galaxy/commit/4b2eca373e936308b0550b9fabfc6...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-07 (Mon, 07 Aug 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/api/users.py

  Log Message:
  -----------
  Remove duplicate roles from selection list


  Commit: 5a8adbf8b77dc985353803a724fc4344dcbbdc79
      https://github.com/galaxyproject/galaxy/commit/5a8adbf8b77dc985353803a724fc4...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-07 (Mon, 07 Aug 2017)

  Changed paths:
    M doc/source/admin/special_topics/grt.rst
    M lib/galaxy/dataset_collections/matching.py
    M lib/galaxy/dependencies/pinned-requirements.txt
    M lib/galaxy/jobs/runners/util/cli/__init__.py
    M lib/galaxy/jobs/runners/util/cli/shell/local.py
    M lib/galaxy/jobs/runners/util/cli/shell/rsh.py
    M lib/galaxy/objectstore/s3_multipart_upload.py
    M lib/galaxy/tools/__init__.py
    M lib/galaxy/tools/execute.py
    M lib/galaxy/tools/parser/xml.py
    M lib/galaxy/tools/parser/yaml.py
    M lib/galaxy/tools/toolbox/base.py
    M lib/galaxy/tools/xsd/galaxy.xsd
    M lib/galaxy/webapps/galaxy/api/users.py
    M lib/galaxy/webapps/galaxy/controllers/async.py
    M lib/galaxy/webapps/galaxy/controllers/history.py
    R scripts/grt.py
    R scripts/grt.yml.sample
    A scripts/grt/export.py
    A scripts/grt/grt.yml.sample
    A scripts/grt/upload.py
    M test/api/test_tools.py
    A test/functional/tools/identifier_source.xml
    M test/functional/tools/samples_tool_conf.xml
    A test/unit/test_remote_shell.py
    M test/unit/tools/test_toolbox.py
    M test/unit/tools_support.py
    M tox.ini

  Log Message:
  -----------
  Merge branch 'remove_duplicates' into admin_grid_roles


  Commit: a7c6c69cbf6a6eeffdf53815144e623576c47b13
      https://github.com/galaxyproject/galaxy/commit/a7c6c69cbf6a6eeffdf53815144e6...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-08 (Tue, 08 Aug 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/admin.py

  Log Message:
  -----------
  Fix lint


  Commit: d3b8889c04ef22d740f8b668a8212c728ba5832c
      https://github.com/galaxyproject/galaxy/commit/d3b8889c04ef22d740f8b668a8212...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-08 (Tue, 08 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/apps/panels/admin-panel.js
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/libs.bundled.js.map

  Log Message:
  -----------
  Fix second role link in admin panel


  Commit: c01023b5adc402a6a8662e9f319afcd9e4f5fc6e
      https://github.com/galaxyproject/galaxy/commit/c01023b5adc402a6a8662e9f319af...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-09 (Wed, 09 Aug 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/admin.py

  Log Message:
  -----------
  Fix indention


  Commit: d32a3a58a50bdbdbe6144a265ef3424a2f011ae2
      https://github.com/galaxyproject/galaxy/commit/d32a3a58a50bdbdbe6144a265ef34...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-09 (Wed, 09 Aug 2017)

  Changed paths:
    M .ci/flake8_lint_include_list.txt
    M .ci/py3_sources.txt
    M config/datatypes_conf.xml.sample
    A config/user_preferences_extra_conf.yml.sample
    M lib/galaxy/config.py
    M lib/galaxy/datatypes/interval.py
    M lib/galaxy/datatypes/molecules.py
    M lib/galaxy/datatypes/mothur.py
    M lib/galaxy/datatypes/sequence.py
    M lib/galaxy/datatypes/sniff.py
    M lib/galaxy/datatypes/tabular.py
    M lib/galaxy/datatypes/text.py
    M lib/galaxy/jobs/command_factory.py
    M lib/galaxy/managers/workflows.py
    M lib/galaxy/tools/parser/interface.py
    M lib/galaxy/tools/parser/output_objects.py
    M lib/galaxy/tools/toolbox/base.py
    M lib/galaxy/web/base/controller.py
    M lib/galaxy/web/base/interactive_environments.py
    M lib/galaxy/web/base/pluginframework.py
    M lib/galaxy/webapps/galaxy/api/users.py
    M lib/galaxy/workflow/extract.py
    M lib/tool_shed/metadata/metadata_generator.py
    M lib/tool_shed/util/workflow_util.py
    M lib/tool_shed/utility_containers/utility_container_manager.py
    M templates/webapps/tool_shed/repository/common.mako
    M test/unit/tools/test_parsing.py

  Log Message:
  -----------
  Merge branch 'revise_page' into admin_grid_roles


  Commit: 938bf525f46c8d3c7568d9b2a97edfa958ba900f
      https://github.com/galaxyproject/galaxy/commit/938bf525f46c8d3c7568d9b2a97ed...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-10 (Thu, 10 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/mvc/library/library-dataset-view.js
    M client/galaxy/scripts/mvc/library/library-foldertoolbar-view.js
    M lib/galaxy/managers/tags.py
    M lib/galaxy/model/__init__.py
    M lib/galaxy/model/mapping.py
    A lib/galaxy/model/migrate/versions/0135_add_library_tags.py
    M lib/galaxy/tools/actions/upload_common.py
    M lib/galaxy/tools/parameters/grouping.py
    M lib/galaxy/web/base/controller.py
    M lib/galaxy/webapps/galaxy/api/lda_datasets.py
    M lib/galaxy/webapps/galaxy/api/library_contents.py
    M lib/galaxy/webapps/galaxy/controllers/library_common.py
    M static/maps/mvc/library/library-dataset-view.js.map
    M static/maps/mvc/library/library-foldertoolbar-view.js.map
    M static/maps/mvc/user/user-preferences.js.map
    M static/scripts/mvc/library/library-dataset-view.js
    M static/scripts/mvc/library/library-foldertoolbar-view.js
    M static/scripts/mvc/user/user-preferences.js

  Log Message:
  -----------
  Merge branch 'revise_grid_forms' into admin_grid_roles


  Commit: be19b36ecaab43dd9cbf2fd5f80995e7ac9ff507
      https://github.com/galaxyproject/galaxy/commit/be19b36ecaab43dd9cbf2fd5f8099...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-08-10 (Thu, 10 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/apps/analysis.js
    A client/galaxy/scripts/mvc/dataset/dataset-error.js
    M client/galaxy/scripts/mvc/dataset/dataset-li-edit.js
    A client/galaxy/scripts/mvc/job/job-params.js
    M client/galaxy/style/less/galaxy_bootstrap/overrides.less
    M config/datatypes_conf.xml.sample
    A config/error_report.yml.sample
    M config/tool_conf.xml.sample
    A doc/source/admin/special_topics/bug_reports.rst
    M doc/source/admin/special_topics/index.rst
    M lib/galaxy/app.py
    M lib/galaxy/config.py
    M lib/galaxy/datatypes/tabular.py
    M lib/galaxy/jobs/__init__.py
    M lib/galaxy/tools/__init__.py
    A lib/galaxy/tools/error_reports/__init__.py
    A lib/galaxy/tools/error_reports/plugins/__init__.py
    A lib/galaxy/tools/error_reports/plugins/biostars.py
    A lib/galaxy/tools/error_reports/plugins/email.py
    A lib/galaxy/tools/error_reports/plugins/json.py
    A lib/galaxy/tools/error_reports/plugins/sentry.py
    M lib/galaxy/tools/errors.py
    A lib/galaxy/tools/sort_collection_list.xml
    M lib/galaxy/util/biostar.py
    M lib/galaxy/util/plugin_config.py
    M lib/galaxy/webapps/galaxy/api/jobs.py
    M lib/galaxy/webapps/galaxy/buildapp.py
    M lib/galaxy/webapps/galaxy/controllers/dataset.py
    M scripts/grt/export.py
    M scripts/grt/upload.py
    A static/maps/mvc/dataset/dataset-error.js.map
    M static/maps/mvc/dataset/dataset-li-edit.js.map
    A static/maps/mvc/job/job-params.js.map
    M static/maps/mvc/user/user-preferences.js.map
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    A static/scripts/mvc/dataset/dataset-error.js
    M static/scripts/mvc/dataset/dataset-li-edit.js
    A static/scripts/mvc/job/job-params.js
    M static/scripts/mvc/user/user-preferences.js
    M static/style/blue/base.css
    M templates/show_params.mako
    R templates/webapps/galaxy/dataset/errors.mako
    A test-data/test.vcf.gz
    M test/functional/tools/sample_datatypes_conf.xml
    M test/functional/tools/samples_tool_conf.xml
    A test/functional/tools/vcf_bgzip.xml

  Log Message:
  -----------
  Merge branch 'revise_grid_forms' into admin_grid_roles


  Commit: 33c794d273271b14732fb8037c2ea8105a3c688e
      https://github.com/galaxyproject/galaxy/commit/33c794d273271b14732fb8037c2ea...
  Author: John Chilton <jmchilton@gmail.com>
  Date:   2017-08-11 (Fri, 11 Aug 2017)

  Changed paths:
    M client/galaxy/scripts/apps/admin.js
    M client/galaxy/scripts/apps/analysis.js
    M client/galaxy/scripts/apps/panels/admin-panel.js
    M client/galaxy/scripts/mvc/form/form-repeat.js
    M client/galaxy/scripts/mvc/form/form-wrapper.js
    M client/galaxy/scripts/mvc/tool/tool-form.js
    M client/galaxy/scripts/mvc/ui/ui-buttons.js
    M client/galaxy/scripts/mvc/ui/ui-list.js
    M client/galaxy/scripts/mvc/user/user-custom-builds.js
    M client/galaxy/scripts/mvc/user/user-preferences.js
    M client/galaxy/scripts/utils/query-string-parsing.js
    M client/galaxy/style/less/ui.less
    M lib/galaxy/webapps/galaxy/api/users.py
    M lib/galaxy/webapps/galaxy/buildapp.py
    M lib/galaxy/webapps/galaxy/controllers/admin.py
    M lib/tool_shed/util/admin_util.py
    M static/maps/mvc/form/form-repeat.js.map
    M static/maps/mvc/form/form-wrapper.js.map
    M static/maps/mvc/tool/tool-form.js.map
    M static/maps/mvc/ui/ui-buttons.js.map
    M static/maps/mvc/ui/ui-list.js.map
    M static/maps/mvc/user/user-custom-builds.js.map
    M static/maps/mvc/user/user-preferences.js.map
    M static/maps/utils/query-string-parsing.js.map
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/mvc/form/form-repeat.js
    M static/scripts/mvc/form/form-wrapper.js
    M static/scripts/mvc/tool/tool-form.js
    M static/scripts/mvc/ui/ui-buttons.js
    M static/scripts/mvc/ui/ui-list.js
    M static/scripts/mvc/user/user-custom-builds.js
    M static/scripts/mvc/user/user-preferences.js
    M static/scripts/utils/query-string-parsing.js
    M static/style/blue/base.css
    R templates/admin/dataset_security/role/role.mako
    R templates/admin/dataset_security/role/role_create.mako
    R templates/admin/dataset_security/role/role_rename.mako
    A templates/webapps/tool_shed/admin/dataset_security/role/role.mako
    A templates/webapps/tool_shed/admin/dataset_security/role/role_create.mako
    A templates/webapps/tool_shed/admin/dataset_security/role/role_rename.mako

  Log Message:
  -----------
  Merge pull request #4385 from guerler/admin_grid_roles

Admin grid roles revision


Compare: https://github.com/galaxyproject/galaxy/compare/600b0aad7ce1...33c794d27327

[galaxy-commits] [galaxyproject/galaxy] 37a6c4: Remove unused template

GitHub