1 new changeset in galaxy-central: http://bitbucket.org/galaxy/galaxy-central/changeset/1b17af87c21b/ changeset: r5257:1b17af87c21b user: dan date: 2011-03-23 17:41:39 summary: Remove 'data.file_name = data.file_name' from Rgenetics code files. affected #: 5 files (5 bytes) --- a/tools/rgenetics/rgClean_code.py Wed Mar 23 12:18:57 2011 -0400 +++ b/tools/rgenetics/rgClean_code.py Wed Mar 23 12:41:39 2011 -0400 @@ -17,7 +17,7 @@ title = basename.translate(trantab) info = '%s filtered by rgClean.py at %s' % (title,timenow()) data.change_datatype('pbed') - data.file_name = data.file_name + #data.file_name = data.file_name data.metadata.base_name = title data.name = '%s.pbed' % title data.info = info --- a/tools/rgenetics/rgLDIndep_code.py Wed Mar 23 12:18:57 2011 -0400 +++ b/tools/rgenetics/rgLDIndep_code.py Wed Mar 23 12:41:39 2011 -0400 @@ -15,7 +15,7 @@ trantab = string.maketrans(killme,'_'*len(killme)) title = basename.encode().translate(trantab) info = '%s filtered by rgLDIndep.py at %s' % (title,timenow()) - data.file_name = data.file_name + #data.file_name = data.file_name data.metadata.base_name = title data.name = '%s.pbed' % title data.info = info --- a/tools/rgenetics/rgPedSub_code.py Wed Mar 23 12:18:57 2011 -0400 +++ b/tools/rgenetics/rgPedSub_code.py Wed Mar 23 12:41:39 2011 -0400 @@ -70,7 +70,7 @@ trantab = string.maketrans(killme,'_'*len(killme)) title = title.translate(trantab) info = '%s filtered by rgPedSub.py at %s' % (title,timenow()) - data.file_name = data.file_name + #data.file_name = data.file_name data.metadata.base_name = basename data.name = '%s.lped' % title data.info = info --- a/tools/rgenetics/rgfakePed_code.py Wed Mar 23 12:18:57 2011 -0400 +++ b/tools/rgenetics/rgfakePed_code.py Wed Mar 23 12:41:39 2011 -0400 @@ -40,7 +40,7 @@ ftype,pext = lookup[outFormat] data.name = '%s.%s' % (base_name,pext) # that's how they've been named in rgfakePhe.py data.change_datatype(pext) - data.file_name = data.file_name + #data.file_name = data.file_name data.metadata.base_name = base_name data.readonly = True out_data[pname] = data --- a/tools/rgenetics/rgfakePhe_code.py Wed Mar 23 12:18:57 2011 -0400 +++ b/tools/rgenetics/rgfakePhe_code.py Wed Mar 23 12:41:39 2011 -0400 @@ -35,7 +35,7 @@ base_name = base_name.translate(ptran) data = out_data['ppheout'] data.name = '%s.phe' % (base_name) # that's how they've been named in rgfakePhe.py - data.file_name = data.file_name + #data.file_name = data.file_name data.metadata.base_name = base_name out_data['pheout'] = data app.model.context.flush() Repository URL: https://bitbucket.org/galaxy/galaxy-central/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.