Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: e1be66312b536a419383746b8e702b6148edeeec https://github.com/galaxyproject/galaxy/commit/e1be66312b536a419383746b8e702... Author: Nicola Soranzo <nicola.soranzo@earlham.ac.uk> Date: 2017-09-14 (Thu, 14 Sep 2017) Changed paths: M create_db.sh M extract_dataset_parts.sh M manage_db.sh M manage_tools.sh Log Message: ----------- Fix virtualenv activation for some scripts In particular add virtualenv activation to extract_dataset_parts.sh to fix the following error when running tools which use `<parallelism>`: ``` Fatal error: /tmp/tmpOoQ01k/job_working_directory/000/12/task_0: Traceback (most recent call last): File "./scripts/extract_dataset_part.py", line 17, in <module> import galaxy.model.mapping # need to load this before we unpickle, in order to setup properties assigned by the mappers File "/opt/galaxyproject_galaxy_release_17.05/lib/galaxy/model/__init__.py", line 20, in <module> from six import string_types ModuleNotFoundError: No module named 'six' ``` Commit: 90eed104f0d80fed13ac6b5cfc13f96d28d01771 https://github.com/galaxyproject/galaxy/commit/90eed104f0d80fed13ac6b5cfc13f... Author: Marius van den Beek <m.vandenbeek@gmail.com> Date: 2017-09-15 (Fri, 15 Sep 2017) Changed paths: M create_db.sh M extract_dataset_parts.sh M manage_db.sh M manage_tools.sh Log Message: ----------- Merge pull request #4616 from nsoranzo/fix_scripts Fix virtualenv activation for some scripts Compare: https://github.com/galaxyproject/galaxy/compare/8b9e91310fd9...90eed104f0d8