1 new commit in galaxy-central:
https://bitbucket.org/galaxy/galaxy-central/commits/15fe17fcdeb7/ changeset: 15fe17fcdeb7 user: greg date: 2013-03-11 15:38:15 summary: Enhancesments for displaying functional tests run against installed tool shed repositories that contain tools. affected #: 1 file
diff -r 0a6b63eca3ff6a72cd874bf36f73a2b5905aff65 -r 15fe17fcdeb7d7a86f605bc93600242c843d897d templates/webapps/tool_shed/repository/display_tool_functional_test_results.mako --- a/templates/webapps/tool_shed/repository/display_tool_functional_test_results.mako +++ b/templates/webapps/tool_shed/repository/display_tool_functional_test_results.mako @@ -28,11 +28,15 @@ # about the test environment even if all tests passed and the repository_metadata.tools_functionally_correct column is set to True. tool_test_errors = repository_metadata.tool_test_errors test_environment_dict = tool_test_errors.get( 'test_environment', None ) + invalid_tests = tool_test_errors.get( 'invalid_tests', [] ) test_errors = tool_test_errors.get( 'test_errors', [] ) + tests_passed = tool_test_errors.get( 'tests_passed', [] ) else: tool_test_errors = None test_environment_dict = {} + invalid_tests = [] test_errors = [] + tests_passed = []
if can_push: browse_label = 'Browse or delete repository tip files' @@ -121,7 +125,7 @@ <b>Repository name:</b><br/> ${repository.name} %endif -%if tool_test_errors: +%if invalid_tests or tool_test_errors or tests_passed: <p/><div class="toolForm"><div class="toolFormTitle">Tool functional test results</div> @@ -151,61 +155,48 @@ <div style="clear: both"></div></div><div class="form-row"> - <table width="100%"> - <tr bgcolor="#D8D8D8" width="100%"><td><b>Test results</td></tr> - </table> + <label>Galaxy version:</label> + ${test_environment_dict.get( 'galaxy_revision', 'unknown' ) | h} + <div style="clear: both"></div></div><div class="form-row"> - <table class="grid"> - %for test_results_dict in test_errors: - <% - test_id = test_results_dict.get( 'test_id', 'unknown' ) - if test_id != 'unknown': - # The test_id looks something like: - # test_tool_000003 (functional.test_toolbox.TestForTool_localhost:9009/repos/test/bwa_mappers/bwa_color_wrapper/1.0.2) - # Highlight the tool id and version. - test_id_items = test_id.split( '/' ) - tool_id = test_id_items[ -2 ] - tool_id = '<b>%s</b>' % tool_id - test_id_items[ -2 ] = tool_id - tool_version = test_id_items[ -1 ] - tool_version = '<b>%s</b>' % ( tool_version.rstrip( ')' ) ) - tool_version = '%s)' % tool_version - test_id_items[ -1 ] = tool_version - test_id = '/'.join( test_id_items ) - test_id_items = test_id.split( ' ' ) - test_num = test_id_items[ 0 ] - test_num = '<b>%s</b>' % test_num - test_id_items[ 0 ] = test_num - test_id = ' '.join( test_id_items ) - - test_status = '<font color="green">Test passed</font>' - stdout = test_results_dict.get( 'stdout', '' ) - if stdout: - stdout = to_safe_string( stdout, to_html=True ) + <label>Galaxy database version:</label> + ${test_environment_dict.get( 'galaxy_database_version', 'unknown' ) | h} + <div style="clear: both"></div> + </div> + %if test_errors: + <div class="form-row"> + <table width="100%"> + <tr bgcolor="#D8D8D8" width="100%"><td><b>Tests that failed</td></tr> + </table> + </div> + <div class="form-row"> + <table class="grid"> + %for test_results_dict in test_errors: + <% + test_id = test_results_dict.get( 'test_id', 'unknown' ) + tool_id = test_results_dict.get( 'tool_id', 'unknown' ) + tool_version = test_results_dict.get( 'tool_version', 'unknown' ) + test_status = '<font color="red">Test failed</font>' + stderr = test_results_dict.get( 'stderr', '' ) if stderr: stderr = to_safe_string( stderr, to_html=True ) - test_status = '<font color="red">Test failed</font>' traceback = test_results_dict.get( 'traceback', '' ) if traceback: traceback = to_safe_string( traceback, to_html=True ) - test_status = '<font color="red">Test failed</font>' - %> - <tr> - <td bgcolor="#FFFFCC"><b>Test id</b></td> - <td bgcolor="#FFFFCC">${test_id}</td> - </tr> - <tr> - <td><b>Status</b></td> - <td>${test_status}</td> - </tr> - %if repository_metadata.tools_functionally_correct: + %><tr> - <td><b>Stdout</b></td> - <td>${stdout}</td> + <td colspan="2" bgcolor="#FFFFCC">Tool id: <b>${tool_id}</b> version: <b>${tool_version}</b></td></tr> - %else: + <tr> + <td><b>Test id</b></td> + <td>${test_id}</td> + </tr> + <tr> + <td><b>Status</b></td> + <td>${test_status}</td> + </tr><tr><td><b>Stderr</b></td><td>${stderr}</td> @@ -214,11 +205,71 @@ <td><b>Traceback</b></td><td>${traceback}</td></tr> - %endif - %endfor - </table> - <div style="clear: both"></div> - </div> + %endfor + </table> + <div style="clear: both"></div> + </div> + %endif + %if tests_passed: + <div class="form-row"> + <table width="100%"> + <tr bgcolor="#D8D8D8" width="100%"><td><b>Tests that passed successfully</td></tr> + </table> + </div> + <div class="form-row"> + <table class="grid"> + %for test_results_dict in tests_passed: + <% + test_id = test_results_dict.get( 'test_id', 'unknown' ) + tool_id = test_results_dict.get( 'tool_id', 'unknown' ) + tool_version = test_results_dict.get( 'tool_version', 'unknown' ) + test_status = '<font color="green">Test passed</font>' + %> + <tr> + <td colspan="2" bgcolor="#FFFFCC">Tool id: <b>${tool_id}</b> version: <b>${tool_version}</b></td> + </tr> + <tr> + <td><b>Test id</b></td> + <td>${test_id}</td> + </tr> + <tr> + <td><b>Status</b></td> + <td>${test_status}</td> + </tr> + %endfor + </table> + </div> + %endif + %if invalid_tests: + <div class="form-row"> + <table width="100%"> + <tr bgcolor="#D8D8D8" width="100%"><td><b>Invalid tests</td></tr> + </table> + </div> + <div class="form-row"> + <table class="grid"> + %for test_results_dict in invalid_tests: + <% + guid = test_results_dict.get( 'tool_guid', None ) + tool_id = test_results_dict.get( 'tool_id', None ) + tool_version = test_results_dict.get( 'tool_version', None ) + reason_test_is_invalid = test_results_dict.get( 'reason_test_is_invalid', 'unknown' ) + if reason_test_is_invalid: + reason_test_is_invalid = to_safe_string( reason_test_is_invalid, to_html=True ) + %> + %if tool_id or tool_version: + <tr> + <td colspan="2" bgcolor="#FFFFCC">Tool id: <b>${tool_id}</b> version: <b>${tool_version}</b></td> + </tr> + %endif + <tr> + <td><b>Reason test is invalid</b></td> + <td>${reason_test_is_invalid}</td> + </tr> + %endfor + </table> + </div> + %endif </div></div> %endif
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
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