[galaxy-commits] commit/galaxy-central: dan: First pass at adding some GATK tools. Included tools are "Realigner Target Creator", "Indel Realigner", "Count Covariates", "Table Recalibration", "Analyze Covariates" and "Unified Genotyper". These tool integrations should be considered beta: changes that will not be backwards-compatible with workflows and re-run functionality should be expected.

1 new changeset in galaxy-central: http://bitbucket.org/galaxy/galaxy-central/changeset/1a379a0f2ecc/ changeset: r5537:1a379a0f2ecc user: dan date: 2011-05-11 15:38:23 summary: First pass at adding some GATK tools. Included tools are "Realigner Target Creator", "Indel Realigner", "Count Covariates", "Table Recalibration", "Analyze Covariates" and "Unified Genotyper". These tool integrations should be considered beta: changes that will not be backwards-compatible with workflows and re-run functionality should be expected. TODO: A few new datatypes have been declared, but exist in name only (subclasses of Text defined only in datatypes_conf.xml), these should be refined to be true datatypes, with proper peeks, sniffing, metadata, etc. Help sections need work. HTML listing of files in e.g. Analyze Covariates should be prettified. Other items not listed. affected #: 23 files (1.0 KB) Diff too large to display. Repository URL: https://bitbucket.org/galaxy/galaxy-central/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.