2 new commits in galaxy-central: https://bitbucket.org/galaxy/galaxy-central/commits/7105c53139d4/ Changeset: 7105c53139d4 Branch: stable User: jgoecks Date: 2013-06-11 23:34:26 Summary: Use len_file_path config option rather than hardcoded path for chromInfo tool parameter. Affected #: 1 file diff -r f35c0441e374a2504397c6fdfe94dd69cb2d29f5 -r 7105c53139d4b8649e6a3714bc117118989712a2 lib/galaxy/tools/actions/__init__.py --- a/lib/galaxy/tools/actions/__init__.py +++ b/lib/galaxy/tools/actions/__init__.py @@ -214,7 +214,7 @@ if not chrom_info: # Default to built-in build. - chrom_info = os.path.join( trans.app.config.tool_data_path, 'shared','ucsc','chrom', "%s.len" % input_dbkey ) + chrom_info = os.path.join( trans.app.config.len_file_path, "%s.len" % input_dbkey ) incoming[ "chromInfo" ] = chrom_info inp_data.update( db_datasets ) https://bitbucket.org/galaxy/galaxy-central/commits/10bd58cc47c5/ Changeset: 10bd58cc47c5 User: jgoecks Date: 2013-06-11 23:34:52 Summary: Automated merge of stable branch Affected #: 1 file diff -r 7e0dd5c61304bd7e0e293a02fe44d4d9f938fb65 -r 10bd58cc47c538522c37defc80334e805c60d13c lib/galaxy/tools/actions/__init__.py --- a/lib/galaxy/tools/actions/__init__.py +++ b/lib/galaxy/tools/actions/__init__.py @@ -214,7 +214,7 @@ if not chrom_info: # Default to built-in build. - chrom_info = os.path.join( trans.app.config.tool_data_path, 'shared','ucsc','chrom', "%s.len" % input_dbkey ) + chrom_info = os.path.join( trans.app.config.len_file_path, "%s.len" % input_dbkey ) incoming[ "chromInfo" ] = chrom_info inp_data.update( db_datasets ) Repository URL: https://bitbucket.org/galaxy/galaxy-central/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.