Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 4fdea55f81756a27bff8ef66b3fe27d4bda36905 https://github.com/galaxyproject/galaxy/commit/4fdea55f81756a27bff8ef66b3fe2... Author: Greg Von Kuster <ghv2@psu.edu> Date: 2015-12-03 (Thu, 03 Dec 2015) Changed paths: M lib/galaxy/datatypes/constructive_solid_geometry.py Log Message: ----------- Enhance the VTK datatypes to support cell data in addition to point data. Replaces https://github.com/galaxyproject/galaxy/pull/1189. Commit: 9b085740dfddfcb67f6a2e21a51503cd2ac0741e https://github.com/galaxyproject/galaxy/commit/9b085740dfddfcb67f6a2e21a5150... Author: Greg Von Kuster <ghv2@psu.edu> Date: 2015-12-03 (Thu, 03 Dec 2015) Changed paths: M lib/galaxy/jobs/output_checker.py M lib/galaxy/managers/workflows.py M lib/galaxy/model/__init__.py M lib/galaxy/tools/__init__.py M lib/galaxy/workflow/modules.py M lib/galaxy/workflow/run.py M lib/galaxy/workflow/run_request.py M test/api/test_workflows.py M test/unit/test_galaxy_mapping.py M test/unit/workflows/test_render.py A test/unit/workflows/test_workflow_progress.py M test/unit/workflows/workflow_support.py Log Message: ----------- Merge branch 'dev' of https://github.com/galaxyproject/galaxy into dev Commit: d2ce6d4d2b03fc7ad0a40ac4b0194f8636350f52 https://github.com/galaxyproject/galaxy/commit/d2ce6d4d2b03fc7ad0a40ac4b0194... Author: Greg Von Kuster <ghv2@psu.edu> Date: 2015-12-03 (Thu, 03 Dec 2015) Changed paths: M README.rst M config/datatypes_conf.xml.sample M config/galaxy.ini.sample M lib/galaxy/config.py M lib/galaxy/datatypes/binary.py M lib/galaxy/datatypes/graph.py M lib/galaxy/datatypes/proteomics.py M lib/galaxy/datatypes/registry.py M lib/galaxy/datatypes/sniff.py A lib/galaxy/datatypes/test/test.idpDB A lib/galaxy/datatypes/test/test.mz5 A lib/galaxy/datatypes/triples.py M lib/galaxy/jobs/__init__.py M lib/galaxy/jobs/runners/__init__.py M lib/galaxy/managers/collections.py M lib/galaxy/model/__init__.py M lib/galaxy/model/mapping.py M lib/galaxy/security/__init__.py M lib/galaxy/tools/__init__.py M lib/galaxy/tools/actions/__init__.py M lib/galaxy/tools/execute.py M lib/galaxy/webapps/tool_shed/api/repositories.py M templates/webapps/tool_shed/common/reset_metadata_on_selected_repositories.mako A test/functional/tools/create_10.xml M test/functional/tools/samples_tool_conf.xml Log Message: ----------- Merge branch 'dev' of https://github.com/galaxyproject/galaxy into dev Commit: 3069e12ca741245563b9e372bf581747861fce6e https://github.com/galaxyproject/galaxy/commit/3069e12ca741245563b9e372bf581... Author: Greg Von Kuster <ghv2@psu.edu> Date: 2015-12-05 (Sat, 05 Dec 2015) Changed paths: M .gitignore A client/galaxy/scripts/apps/analysis.js A client/galaxy/scripts/apps/history-panel.js A client/galaxy/scripts/apps/login.js A client/galaxy/scripts/apps/tool-panel.js R client/galaxy/scripts/base.js R client/galaxy/scripts/galaxy-app-base.js R client/galaxy/scripts/galaxy.autocom_tagging.js R client/galaxy/scripts/galaxy.base.js R client/galaxy/scripts/galaxy.frame.js A client/galaxy/scripts/galaxy.js M client/galaxy/scripts/galaxy.library.js R client/galaxy/scripts/galaxy.masthead.js R client/galaxy/scripts/galaxy.menu.js M client/galaxy/scripts/galaxy.pages.js R client/galaxy/scripts/galaxy.panels.js R client/galaxy/scripts/galaxy.tools.js R client/galaxy/scripts/galaxy.ui.scrollPanel.js A client/galaxy/scripts/layout/masthead.js A client/galaxy/scripts/layout/menu.js A client/galaxy/scripts/layout/modal.js A client/galaxy/scripts/layout/page.js A 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templates/display_base.mako M templates/galaxy_client_app.mako M templates/grid_base.mako A templates/js-app.mako M templates/refresh_frames.mako M templates/tagging_common.mako M templates/user/logout.mako M templates/webapps/galaxy/dataset/display.mako M templates/webapps/galaxy/dataset/edit_attributes.mako M templates/webapps/galaxy/dataset/tabular_chunked.mako M templates/webapps/galaxy/galaxy.masthead.mako M templates/webapps/galaxy/galaxy.panels.mako M templates/webapps/galaxy/history/display.mako M templates/webapps/galaxy/history/embed.mako M templates/webapps/galaxy/history/view.mako M templates/webapps/galaxy/history/view_multiple.mako M templates/webapps/galaxy/library/common/ldda_edit_info.mako M templates/webapps/galaxy/library/common/move_library_item.mako M templates/webapps/galaxy/library/common/upload.mako M templates/webapps/galaxy/page/editor.mako M templates/webapps/galaxy/requests/common/create_request.mako M templates/webapps/galaxy/requests/common/find_samples.mako R templates/webapps/galaxy/root/index.mako M templates/webapps/galaxy/visualization/display.mako M templates/webapps/galaxy/visualization/display_in_frame.mako M templates/webapps/galaxy/visualization/sweepster.mako M templates/webapps/galaxy/workflow/editor.mako M templates/webapps/galaxy/workflow/run.mako M test/api/helpers.py M test/api/test_jobs.py M test/api/test_tools.py M test/base/twilltestcase.py M test/casperjs/api-history-permission-tests.js M test/casperjs/spaceghost.js M test/qunit/test-app.js M test/qunit/test-common.js M test/qunit/test-data/bootstrapped.js M test/qunit/tests/galaxy-app-base.js M test/qunit/tests/workflow_editor_tests.js M test/tool_shed/test_data/1440_files/complex_dependency/tool_dependencies.xml M test/unit/tools/test_actions.py M test/unit/tools/test_data_parameters.py Log Message: ----------- Merge branch 'dev' of https://github.com/galaxyproject/galaxy into dev Commit: e12179b0160d242be870b15b8da5a46e294063bf https://github.com/galaxyproject/galaxy/commit/e12179b0160d242be870b15b8da5a... Author: Martin Cech <cech.marten@gmail.com> Date: 2015-12-05 (Sat, 05 Dec 2015) Changed paths: M lib/galaxy/datatypes/constructive_solid_geometry.py Log Message: ----------- Merge pull request #1211 from gregvonkuster/dev Enhance the VTK datatypes to support cell data in addition to point Compare: https://github.com/galaxyproject/galaxy/compare/fef8ce2a762b...e12179b0160d