[galaxy-commits] [galaxyproject/galaxy] b7482a: Remove unused workflow rename controller endpoint

24 Nov 2017


      Branch: refs/heads/dev
  Home:   https://github.com/galaxyproject/galaxy
  Commit: b7482aa1ff88d4339578205f398e209c48934d97
      https://github.com/galaxyproject/galaxy/commit/b7482aa1ff88d4339578205f398e2...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-11-13 (Mon, 13 Nov 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/workflow.py

  Log Message:
  -----------
  Remove unused workflow rename controller endpoint


  Commit: 32e00137be73485d3bc5a17121edec23366641eb
      https://github.com/galaxyproject/galaxy/commit/32e00137be73485d3bc5a17121ede...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-11-13 (Mon, 13 Nov 2017)

  Changed paths:
    M client/galaxy/scripts/apps/analysis.js
    M lib/galaxy/webapps/galaxy/buildapp.py
    M lib/galaxy/webapps/galaxy/controllers/workflow.py
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js.map

  Log Message:
  -----------
  Revise workflow create endpoint


  Commit: 63c61d2ce7148e5201686e3e7fde9aefe90d65bd
      https://github.com/galaxyproject/galaxy/commit/63c61d2ce7148e5201686e3e7fde9...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-11-13 (Mon, 13 Nov 2017)

  Changed paths:
    M client/galaxy/scripts/apps/analysis.js
    M client/galaxy/scripts/apps/panels/tool-panel.js
    M client/galaxy/scripts/layout/menu.js
    M client/galaxy/scripts/mvc/workflow/workflow.js
    M lib/galaxy/webapps/galaxy/buildapp.py
    M lib/galaxy/webapps/galaxy/controllers/workflow.py
    M static/maps/layout/menu.js.map
    M static/maps/mvc/workflow/workflow.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/layout/menu.js
    M static/scripts/mvc/workflow/workflow.js

  Log Message:
  -----------
  Resolve inconsistent routings names


  Commit: d6d577029ecb6c882d65586779de937eac64c6ae
      https://github.com/galaxyproject/galaxy/commit/d6d577029ecb6c882d65586779de9...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-11-13 (Mon, 13 Nov 2017)

  Changed paths:
    M client/galaxy/scripts/mvc/tag.js
    M client/galaxy/scripts/mvc/workflow/workflow.js
    M static/maps/mvc/tag.js.map
    M static/maps/mvc/workflow/workflow.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/mvc/tag.js
    M static/scripts/mvc/workflow/workflow.js

  Log Message:
  -----------
  Fix more routes for consistency and resilience


  Commit: bd254de59b833c04208b5de3aa23571c935de33d
      https://github.com/galaxyproject/galaxy/commit/bd254de59b833c04208b5de3aa235...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-11-13 (Mon, 13 Nov 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/workflow.py

  Log Message:
  -----------
  Fix route for imported workflows success message


  Commit: 4692de3fafa55dc4566971f4b5d2c0fee4dc1868
      https://github.com/galaxyproject/galaxy/commit/4692de3fafa55dc4566971f4b5d2c...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-11-13 (Mon, 13 Nov 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/workflow.py

  Log Message:
  -----------
  Fix error message


  Commit: ab16991ef4ee1073e8a4287f2c6511aea17e4290
      https://github.com/galaxyproject/galaxy/commit/ab16991ef4ee1073e8a4287f2c651...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-11-13 (Mon, 13 Nov 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/workflow.py

  Log Message:
  -----------
  Fix lint


  Commit: ef0e2530584671b5735d210d20603881224b9d5e
      https://github.com/galaxyproject/galaxy/commit/ef0e2530584671b5735d210d20603...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-11-16 (Thu, 16 Nov 2017)

  Changed paths:
    M test/selenium_tests/test_workflow_editor.py

  Log Message:
  -----------
  Fix selenium test attempt

Fix


  Commit: 6e2285d3f2bc687c68b38c5689b3524283c86fc6
      https://github.com/galaxyproject/galaxy/commit/6e2285d3f2bc687c68b38c5689b35...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-11-16 (Thu, 16 Nov 2017)

  Changed paths:
    R .ci/flake8_lint_include_list.txt
    R .ci/flake8_wrapper_imports.sh
    M .travis.yml
    M client/galaxy/scripts/mvc/collection/collection-model.js
    M client/galaxy/scripts/mvc/collection/collection-view.js
    M client/galaxy/scripts/mvc/history/hda-li.js
    M client/galaxy/scripts/mvc/history/hdca-li-edit.js
    M client/galaxy/scripts/mvc/history/hdca-li.js
    M client/galaxy/scripts/mvc/history/hdca-model.js
    M client/galaxy/scripts/mvc/history/history-content-model.js
    M client/galaxy/scripts/mvc/history/history-contents.js
    A client/galaxy/scripts/mvc/history/history-item-li.js
    M client/galaxy/scripts/mvc/history/history-model.js
    M client/galaxy/scripts/mvc/history/history-view.js
    M client/galaxy/scripts/mvc/tool/tool-form-base.js
    M config/datatypes_conf.xml.sample
    M config/galaxy.ini.sample
    A config/plugins/interactive_environments/askomics/config/allowed_images.yml.sample
    A config/plugins/interactive_environments/askomics/config/askomics.ini.sample
    A config/plugins/interactive_environments/askomics/config/askomics.xml
    A config/plugins/interactive_environments/askomics/static/js/askomics.js
    A config/plugins/interactive_environments/askomics/templates/askomics.mako
    M config/plugins/webhooks/demo/tour_generator/static/script.js
    M lib/galaxy/app.py
    M lib/galaxy/config.py
    M lib/galaxy/dataset_collections/matching.py
    M lib/galaxy/dataset_collections/registry.py
    M lib/galaxy/dataset_collections/types/list.py
    M lib/galaxy/dataset_collections/types/paired.py
    M lib/galaxy/datatypes/data.py
    M lib/galaxy/datatypes/dataproviders/dataset.py
    M lib/galaxy/datatypes/display_applications/application.py
    M lib/galaxy/datatypes/graph.py
    M lib/galaxy/datatypes/interval.py
    M lib/galaxy/datatypes/registry.py
    M lib/galaxy/datatypes/sequence.py
    M lib/galaxy/datatypes/tabular.py
    M lib/galaxy/datatypes/tracks.py
    M lib/galaxy/datatypes/util/gff_util.py
    M lib/galaxy/dependencies/pinned-requirements.txt
    M lib/galaxy/dependencies/pipfiles/flake8/Pipfile
    M lib/galaxy/dependencies/pipfiles/flake8/Pipfile.lock
    M lib/galaxy/dependencies/pipfiles/flake8/pinned-hashed-requirements.txt
    M lib/galaxy/dependencies/pipfiles/flake8/pinned-requirements.txt
    R lib/galaxy/dependencies/pipfiles/flake8_imports/Pipfile
    R lib/galaxy/dependencies/pipfiles/flake8_imports/Pipfile.lock
    R lib/galaxy/dependencies/pipfiles/flake8_imports/pinned-hashed-requirements.txt
    R lib/galaxy/dependencies/pipfiles/flake8_imports/pinned-requirements.txt
    M lib/galaxy/dependencies/pipfiles/update.sh
    M lib/galaxy/dependencies/requirements.txt
    M lib/galaxy/external_services/actions.py
    M lib/galaxy/external_services/service.py
    M lib/galaxy/forms/forms.py
    M lib/galaxy/jobs/__init__.py
    M lib/galaxy/jobs/dynamic_tool_destination.py
    M lib/galaxy/jobs/mapper.py
    M lib/galaxy/jobs/metrics/__init__.py
    M lib/galaxy/jobs/metrics/collectl/processes.py
    M lib/galaxy/jobs/metrics/instrumenters/collectl.py
    M lib/galaxy/jobs/metrics/instrumenters/cpuinfo.py
    M lib/galaxy/jobs/metrics/instrumenters/meminfo.py
    M lib/galaxy/jobs/rule_helper.py
    M lib/galaxy/jobs/runners/__init__.py
    M lib/galaxy/jobs/runners/chronos.py
    M lib/galaxy/jobs/runners/cli.py
    M lib/galaxy/jobs/runners/local.py
    M lib/galaxy/jobs/runners/state_handlers/resubmit.py
    M lib/galaxy/jobs/runners/util/__init__.py
    M lib/galaxy/jobs/splitters/multi.py
    M lib/galaxy/managers/citations.py
    M lib/galaxy/managers/configuration.py
    M lib/galaxy/managers/containers.py
    M lib/galaxy/managers/datasets.py
    M lib/galaxy/managers/folders.py
    M lib/galaxy/managers/hdas.py
    M lib/galaxy/managers/hdcas.py
    M lib/galaxy/managers/histories.py
    M lib/galaxy/managers/history_contents.py
    M lib/galaxy/managers/library_datasets.py
    M lib/galaxy/managers/pages.py
    M lib/galaxy/managers/ratable.py
    M lib/galaxy/managers/rbac_secured.py
    M lib/galaxy/managers/roles.py
    M lib/galaxy/managers/sharable.py
    M lib/galaxy/managers/tags.py
    M lib/galaxy/managers/users.py
    M lib/galaxy/managers/visualizations.py
    M lib/galaxy/managers/workflows.py
    M lib/galaxy/model/__init__.py
    M lib/galaxy/model/migrate/check.py
    M lib/galaxy/objectstore/__init__.py
    M lib/galaxy/objectstore/azure_blob.py
    M lib/galaxy/objectstore/pithos.py
    M lib/galaxy/objectstore/rods.py
    M lib/galaxy/objectstore/s3.py
    M lib/galaxy/objectstore/s3_multipart_upload.py
    M lib/galaxy/openid/providers.py
    M lib/galaxy/queue_worker.py
    M lib/galaxy/queues.py
    M lib/galaxy/sample_tracking/request_types.py
    M lib/galaxy/tools/__init__.py
    M lib/galaxy/tools/actions/metadata.py
    M lib/galaxy/tools/actions/upload.py
    M lib/galaxy/tools/cwl/parser.py
    M lib/galaxy/tools/cwl/schema.py
    M lib/galaxy/tools/deps/__init__.py
    M lib/galaxy/tools/deps/conda_util.py
    M lib/galaxy/tools/deps/containers.py
    M lib/galaxy/tools/deps/mulled/mulled_build.py
    M lib/galaxy/tools/deps/mulled/mulled_build_tool.py
    M lib/galaxy/tools/deps/mulled/util.py
    M lib/galaxy/tools/deps/resolvers/__init__.py
    M lib/galaxy/tools/deps/resolvers/conda.py
    M lib/galaxy/tools/deps/resolvers/galaxy_packages.py
    M lib/galaxy/tools/error_reports/plugins/biostars.py
    M lib/galaxy/tools/error_reports/plugins/email.py
    M lib/galaxy/tools/error_reports/plugins/github.py
    M lib/galaxy/tools/error_reports/plugins/influxdb.py
    M lib/galaxy/tools/error_reports/plugins/json.py
    M lib/galaxy/tools/error_reports/plugins/sentry.py
    M lib/galaxy/tools/lint.py
    M lib/galaxy/tools/linters/inputs.py
    M lib/galaxy/tools/locations/__init__.py
    M lib/galaxy/tools/locations/dockstore.py
    M lib/galaxy/tools/locations/http.py
    M lib/galaxy/tools/parameters/__init__.py
    M lib/galaxy/tools/parameters/basic.py
    M lib/galaxy/tools/parameters/dynamic_options.py
    M lib/galaxy/tools/parameters/output_collect.py
    M lib/galaxy/tools/parser/cwl.py
    M lib/galaxy/tools/parser/factory.py
    M lib/galaxy/tools/parser/xml.py
    M lib/galaxy/tools/parser/yaml.py
    M lib/galaxy/tools/toolbox/__init__.py
    M lib/galaxy/tools/toolbox/base.py
    M lib/galaxy/tools/toolbox/filters/__init__.py
    M lib/galaxy/tools/toolbox/lineages/factory.py
    M lib/galaxy/tools/toolbox/lineages/interface.py
    M lib/galaxy/tools/toolbox/panel.py
    M lib/galaxy/tools/verify/__init__.py
    M lib/galaxy/tools/verify/test_data.py
    M lib/galaxy/tools/xsd/galaxy.xsd
    M lib/galaxy/tours/__init__.py
    M lib/galaxy/util/__init__.py
    M lib/galaxy/util/biostar.py
    M lib/galaxy/util/object_wrapper.py
    M lib/galaxy/util/pastescript/loadwsgi.py
    M lib/galaxy/util/properties.py
    A lib/galaxy/util/script.py
    M lib/galaxy/util/submodules.py
    M lib/galaxy/util/xml_macros.py
    M lib/galaxy/visualization/data_providers/phyloviz/__init__.py
    M lib/galaxy/visualization/data_providers/phyloviz/newickparser.py
    M lib/galaxy/visualization/data_providers/phyloviz/nexusparser.py
    M lib/galaxy/visualization/data_providers/phyloviz/phyloxmlparser.py
    M lib/galaxy/visualization/data_providers/registry.py
    M lib/galaxy/visualization/plugins/config_parser.py
    M lib/galaxy/visualization/plugins/registry.py
    M lib/galaxy/visualization/plugins/resource_parser.py
    M lib/galaxy/web/form_builder.py
    M lib/galaxy/web/framework/formbuilder.py
    M lib/galaxy/web/framework/helpers/__init__.py
    M lib/galaxy/web/framework/middleware/batch.py
    M lib/galaxy/web/framework/middleware/graphite.py
    M lib/galaxy/web/framework/middleware/profile.py
    M lib/galaxy/web/framework/middleware/remoteuser.py
    M lib/galaxy/web/framework/openid_manager.py
    M lib/galaxy/web/proxy/__init__.py
    M lib/galaxy/web/security/__init__.py
    M lib/galaxy/webapps/config_manage.py
    M lib/galaxy/webapps/galaxy/api/annotations.py
    M lib/galaxy/webapps/galaxy/api/configuration.py
    M lib/galaxy/webapps/galaxy/api/dataset_collections.py
    M lib/galaxy/webapps/galaxy/api/datasets.py
    M lib/galaxy/webapps/galaxy/api/datatypes.py
    M lib/galaxy/webapps/galaxy/api/extended_metadata.py
    M lib/galaxy/webapps/galaxy/api/folder_contents.py
    M lib/galaxy/webapps/galaxy/api/folders.py
    M lib/galaxy/webapps/galaxy/api/forms.py
    M lib/galaxy/webapps/galaxy/api/history_contents.py
    M lib/galaxy/webapps/galaxy/api/item_tags.py
    M lib/galaxy/webapps/galaxy/api/job_files.py
    M lib/galaxy/webapps/galaxy/api/jobs.py
    M lib/galaxy/webapps/galaxy/api/libraries.py
    M lib/galaxy/webapps/galaxy/api/library_contents.py
    M lib/galaxy/webapps/galaxy/api/metrics.py
    M lib/galaxy/webapps/galaxy/api/page_revisions.py
    M lib/galaxy/webapps/galaxy/api/pages.py
    M lib/galaxy/webapps/galaxy/api/provenance.py
    M lib/galaxy/webapps/galaxy/api/quotas.py
    M lib/galaxy/webapps/galaxy/api/remote_files.py
    M lib/galaxy/webapps/galaxy/api/search.py
    M lib/galaxy/webapps/galaxy/api/tool_dependencies.py
    M lib/galaxy/webapps/galaxy/api/tool_shed_repositories.py
    M lib/galaxy/webapps/galaxy/api/toolshed.py
    M lib/galaxy/webapps/galaxy/api/visualizations.py
    M lib/galaxy/webapps/galaxy/api/webhooks.py
    M lib/galaxy/webapps/galaxy/api/workflows.py
    M lib/galaxy/webapps/galaxy/controllers/admin.py
    M lib/galaxy/webapps/galaxy/controllers/admin_toolshed.py
    M lib/galaxy/webapps/galaxy/controllers/biostar.py
    M lib/galaxy/webapps/galaxy/controllers/library.py
    M lib/galaxy/webapps/galaxy/controllers/tag.py
    M lib/galaxy/webapps/galaxy/controllers/user.py
    M lib/galaxy/webapps/galaxy/controllers/visualization.py
    M lib/galaxy/webapps/galaxy/controllers/workflow.py
    M lib/galaxy/webapps/reports/app.py
    M lib/galaxy/webapps/reports/controllers/history.py
    M lib/galaxy/webapps/reports/controllers/home.py
    M lib/galaxy/webapps/reports/controllers/jobs.py
    M lib/galaxy/webapps/reports/controllers/root.py
    M lib/galaxy/webapps/reports/controllers/sample_tracking.py
    M lib/galaxy/webapps/reports/controllers/users.py
    M lib/galaxy/webapps/reports/controllers/workflows.py
    M lib/galaxy/webapps/tool_shed/api/authenticate.py
    M lib/galaxy/webapps/tool_shed/api/categories.py
    M lib/galaxy/webapps/tool_shed/api/configuration.py
    M lib/galaxy/webapps/tool_shed/api/groups.py
    M lib/galaxy/webapps/tool_shed/api/repositories.py
    M lib/galaxy/webapps/tool_shed/api/tools.py
    M lib/galaxy/webapps/tool_shed/api/users.py
    M lib/galaxy/webapps/tool_shed/app.py
    M lib/galaxy/webapps/tool_shed/controllers/admin.py
    M lib/galaxy/webapps/tool_shed/controllers/repository_review.py
    M lib/galaxy/webapps/tool_shed/controllers/upload.py
    M lib/galaxy/webapps/tool_shed/controllers/user.py
    M lib/galaxy/webapps/tool_shed/search/tool_search.py
    M lib/galaxy/webapps/tool_shed/util/hgweb_config.py
    M lib/galaxy/workflow/extract.py
    M lib/galaxy/workflow/schedulers/core.py
    M lib/tool_shed/capsule/capsule_manager.py
    M lib/tool_shed/dependencies/attribute_handlers.py
    M lib/tool_shed/galaxy_install/install_manager.py
    M lib/tool_shed/galaxy_install/tool_dependencies/recipe/install_environment.py
    M lib/tool_shed/galaxy_install/tool_migration_manager.py
    M lib/tool_shed/galaxy_install/tools/tool_panel_manager.py
    M lib/tool_shed/repository_types/registry.py
    M lib/tool_shed/tools/data_table_manager.py
    M lib/tool_shed/tools/tool_validator.py
    M lib/tool_shed/tools/tool_version_manager.py
    M lib/tool_shed/util/shed_util_common.py
    M lib/tool_shed/util/tool_util.py
    M lib/tool_shed/utility_containers/__init__.py
    M scripts/common_startup.sh
    M scripts/functional_tests.py
    M scripts/manage_tool_dependencies.py
    M static/maps/mvc/collection/collection-model.js.map
    M static/maps/mvc/collection/collection-view.js.map
    M static/maps/mvc/history/hda-li.js.map
    M static/maps/mvc/history/hdca-li-edit.js.map
    M static/maps/mvc/history/hdca-li.js.map
    M static/maps/mvc/history/hdca-model.js.map
    M static/maps/mvc/history/history-content-model.js.map
    M static/maps/mvc/history/history-contents.js.map
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    M static/maps/mvc/history/history-model.js.map
    M static/maps/mvc/history/history-view.js.map
    M static/maps/mvc/tool/tool-form-base.js.map
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/bundled/login.bundled.js
    M static/scripts/bundled/login.bundled.js.map
    M static/scripts/mvc/collection/collection-model.js
    M static/scripts/mvc/collection/collection-view.js
    M static/scripts/mvc/history/hda-li.js
    M static/scripts/mvc/history/hdca-li-edit.js
    M static/scripts/mvc/history/hdca-li.js
    M static/scripts/mvc/history/hdca-model.js
    M static/scripts/mvc/history/history-content-model.js
    M static/scripts/mvc/history/history-contents.js
    A static/scripts/mvc/history/history-item-li.js
    M static/scripts/mvc/history/history-model.js
    M static/scripts/mvc/history/history-view.js
    M static/scripts/mvc/tool/tool-form-base.js
    M templates/admin/tool_shed_repository/repository_actions_menu.mako
    M templates/admin/tool_shed_repository/view_tool_metadata.mako
    R templates/search/index.mako
    M templates/show_params.mako
    M templates/user/register.mako
    M test/api/test_history_contents.py
    M test/api/test_jobs.py
    M test/api/test_libraries.py
    M test/api/test_page_revisions.py
    M test/base/driver_util.py
    M test/base/populators.py
    M test/base/testcase.py
    M test/functional/test_toolbox.py
    A test/functional/tools/cat_data_and_sleep.xml
    M test/functional/tools/samples_tool_conf.xml
    A test/functional/webhooks/tour_generator
    M test/galaxy_selenium/components.py
    M test/galaxy_selenium/data.py
    M test/galaxy_selenium/navigates_galaxy.py
    M test/galaxy_selenium/navigation.yml
    A test/integration/test_local_job_cancellation.py
    M test/manual/workflows_scaling.py
    M test/selenium_tests/test_stock_tours.py
    A test/selenium_tests/test_tool_describing_tours.py
    M test/selenium_tests/test_tool_form.py
    M test/shed_functional/base/twilltestcase.py
    M test/unit/datatypes/dataproviders/test_base_dataproviders.py
    M test/unit/datatypes/dataproviders/test_line_dataproviders.py
    M test/unit/jobs/dynamic_tool_destination/test_dynamic_tool_destination.py
    M test/unit/jobs/test_job_wrapper.py
    M test/unit/jobs/test_mapper.py
    M test/unit/jobs/test_runner_local.py
    M test/unit/managers/base.py
    M test/unit/managers/test_CollectionManager.py
    M test/unit/managers/test_DatasetManager.py
    M test/unit/managers/test_HDAManager.py
    M test/unit/managers/test_HDCAManager.py
    M test/unit/managers/test_HistoryContentsManager.py
    M test/unit/managers/test_HistoryManager.py
    M test/unit/managers/test_UserManager.py
    M test/unit/shed_unit/test_installed_repository_manager.py
    M test/unit/shed_unit/test_tool_panel_manager.py
    M test/unit/test_objectstore.py
    M test/unit/tools/test_actions.py
    M test/unit/tools/test_collect_primary_datasets.py
    M test/unit/tools/test_column_parameters.py
    M test/unit/tools/test_data_parameters.py
    M test/unit/tools/test_dataset_matcher.py
    M test/unit/tools/test_evaluation.py
    M test/unit/tools/test_execution.py
    M test/unit/tools/test_history_imp_exp.py
    M test/unit/tools/test_parameter_parsing.py
    M test/unit/tools/test_parsing.py
    M test/unit/tools/test_select_parameters.py
    M test/unit/tools/test_tool_deps.py
    M test/unit/tools/test_tool_loader.py
    M test/unit/tools/test_toolbox.py
    M test/unit/tools/test_watcher.py
    M test/unit/tools_support.py
    M test/unit/visualizations/plugins/test_VisualizationPlugin.py
    M test/unit/visualizations/plugins/test_VisualizationsRegistry.py
    M test/unit/web/framework/test_webapp.py
    M test/unit/workflows/test_modules.py
    M test/unit/workflows/test_run_parameters.py
    M test/unit/workflows/test_workflow_progress.py
    M tools/data_source/microbial_import.xml
    M tools/filters/gff/gff_filter_by_attribute.py
    M tools/filters/gff/gff_filter_by_feature_count.py
    M tools/phenotype_association/senatag.py
    M tox.ini

  Log Message:
  -----------
  Merge branch 'dev' into remove_unused_workflow_endpoint


  Commit: 33eb15b63c8ffd1ffb23db299356b682d5e45042
      https://github.com/galaxyproject/galaxy/commit/33eb15b63c8ffd1ffb23db299356b...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-11-18 (Sat, 18 Nov 2017)

  Changed paths:
    M lib/galaxy/webapps/galaxy/controllers/workflow.py
    M test/selenium_tests/test_workflow_editor.py

  Log Message:
  -----------
  Fix import order and style


  Commit: 739dab0d80f9bb1cd5814884f464d114908eed9b
      https://github.com/galaxyproject/galaxy/commit/739dab0d80f9bb1cd5814884f464d...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-11-20 (Mon, 20 Nov 2017)

  Changed paths:
    M test/shed_functional/base/twilltestcase.py

  Log Message:
  -----------
  Fix toolshed tests


  Commit: 3b8d5981c7540f911575d8b48990044dc3598ff3
      https://github.com/galaxyproject/galaxy/commit/3b8d5981c7540f911575d8b489900...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-11-20 (Mon, 20 Nov 2017)

  Changed paths:
    M test/selenium_tests/test_workflow_editor.py

  Log Message:
  -----------
  Fix selector

Fix

Fix


  Commit: 59e4d401a06dd5e835165d228ede3ea399b877c3
      https://github.com/galaxyproject/galaxy/commit/59e4d401a06dd5e835165d228ede3...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-11-20 (Mon, 20 Nov 2017)

  Changed paths:
    M client/galaxy/scripts/apps/analysis.js
    M client/galaxy/scripts/mvc/form/form-wrapper.js
    M lib/galaxy/webapps/galaxy/controllers/workflow.py
    M static/maps/mvc/form/form-wrapper.js.map
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/mvc/form/form-wrapper.js

  Log Message:
  -----------
  Augment form wrapper redirect, load workflow editor after creation


  Commit: da2e38c723c4253914b0698a1daa4a30b7da6a3e
      https://github.com/galaxyproject/galaxy/commit/da2e38c723c4253914b0698a1daa4...
  Author: John Chilton <jmchilton@gmail.com>
  Date:   2017-11-21 (Tue, 21 Nov 2017)

  Changed paths:
    M test/selenium_tests/test_workflow_editor.py

  Log Message:
  -----------
  Allow transitioning to workflow editor before clicking inputs menu.


  Commit: 343c39f31680588489156b35ca27d295779ec082
      https://github.com/galaxyproject/galaxy/commit/343c39f31680588489156b35ca27d...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-11-21 (Tue, 21 Nov 2017)

  Changed paths:
    M test/selenium_tests/test_workflow_editor.py

  Log Message:
  -----------
  Use better identifiers in test


  Commit: 01e0ca602d5fc62bbe249d297b8b064d5a310fa0
      https://github.com/galaxyproject/galaxy/commit/01e0ca602d5fc62bbe249d297b8b0...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-11-21 (Tue, 21 Nov 2017)

  Changed paths:
    M client/galaxy/scripts/mvc/workflow/workflow-view.js
    M static/maps/mvc/workflow/workflow-view.js.map
    M static/scripts/mvc/workflow/workflow-view.js

  Log Message:
  -----------
  Fix link


  Commit: 4a3dca504e5d500bb507e8ec937fa371b66bef5e
      https://github.com/galaxyproject/galaxy/commit/4a3dca504e5d500bb507e8ec937fa...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-11-22 (Wed, 22 Nov 2017)

  Changed paths:
    M .travis.yml
    M Makefile
    A client/galaxy/scripts/apps/admin-toolshed.js
    M client/galaxy/scripts/apps/admin.js
    M client/galaxy/scripts/apps/analysis.js
    A client/galaxy/scripts/apps/library.js
    A client/galaxy/scripts/apps/masthead.js
    M client/galaxy/scripts/apps/panels/admin-panel.js
    A client/galaxy/scripts/apps/viz.js
    A client/galaxy/scripts/apps/workflow.js
    A client/galaxy/scripts/components/citations.vue
    A client/galaxy/scripts/components/user_api_keys.vue
    M client/galaxy/scripts/galaxy.library.js
    M client/galaxy/scripts/layout/panel.js
    R client/galaxy/scripts/mvc/citation/citation-model.js
    R client/galaxy/scripts/mvc/citation/citation-view.js
    M client/galaxy/scripts/mvc/history/options-menu.js
    M client/galaxy/scripts/mvc/library/library-folderlist-view.js
    M client/galaxy/scripts/mvc/library/library-foldertoolbar-view.js
    M client/galaxy/scripts/mvc/library/library-libraryrow-view.js
    M client/galaxy/scripts/mvc/tool/tool-form-base.js
    M client/galaxy/scripts/mvc/workflow/workflow-forms.js
    M client/galaxy/scripts/mvc/workflow/workflow-node.js
    A client/galaxy/scripts/qunit/assets/base.css
    A client/galaxy/scripts/qunit/test-app.js
    A client/galaxy/scripts/qunit/test-data/bootstrapped.js
    A client/galaxy/scripts/qunit/test-data/fakeserver.js
    A client/galaxy/scripts/qunit/test-data/job-dag-1.js
    A client/galaxy/scripts/qunit/test-data/paired-collection-creator.data.js
    A client/galaxy/scripts/qunit/tests/form_tests.js
    A client/galaxy/scripts/qunit/tests/galaxy-app-base.js
    A client/galaxy/scripts/qunit/tests/graph.js
    A client/galaxy/scripts/qunit/tests/hda-base.js
    A client/galaxy/scripts/qunit/tests/history_contents_model_tests.js
    A client/galaxy/scripts/qunit/tests/job-dag.js
    A client/galaxy/scripts/qunit/tests/list-of-pairs-collection-creator.js
    A client/galaxy/scripts/qunit/tests/masthead_tests.js
    A client/galaxy/scripts/qunit/tests/metrics-logger.js
    A client/galaxy/scripts/qunit/tests/modal_tests.js
    A client/galaxy/scripts/qunit/tests/page_tests.js
    A client/galaxy/scripts/qunit/tests/popover_tests.js
    A client/galaxy/scripts/qunit/tests/ui_tests.js
    A client/galaxy/scripts/qunit/tests/upload_dialog_tests.js
    A client/galaxy/scripts/qunit/tests/utils_test.js
    A client/galaxy/scripts/qunit/tests/workflow_editor_tests.js
    M client/galaxy/style/less/base.less
    M client/gulpfile.js
    A client/karma.config.js
    M client/package.json
    M client/webpack.config.js
    M client/yarn.lock
    M config/datatypes_conf.xml.sample
    M lib/galaxy/datatypes/binary.py
    A lib/galaxy/datatypes/test/matrix.cool
    M lib/galaxy/jobs/actions/post.py
    M lib/galaxy/jobs/metrics/instrumenters/core.py
    M lib/galaxy/managers/collections.py
    M lib/galaxy/webapps/galaxy/api/configuration.py
    M lib/galaxy/webapps/galaxy/api/history_contents.py
    M lib/galaxy/webapps/galaxy/buildapp.py
    M lib/galaxy/webapps/galaxy/controllers/admin_toolshed.py
    M lib/galaxy/webapps/galaxy/controllers/history.py
    M lib/galaxy/webapps/galaxy/controllers/library.py
    M lib/galaxy/webapps/galaxy/controllers/userskeys.py
    M lib/galaxy/webapps/galaxy/controllers/visualization.py
    M lib/galaxy/workflow/scheduling_manager.py
    M run_tests.sh
    M static/maps/galaxy.library.js.map
    M static/maps/layout/panel.js.map
    M static/maps/mvc/citation/citation-model.js.map
    M static/maps/mvc/citation/citation-view.js.map
    A static/maps/mvc/citations.js.map
    M static/maps/mvc/history/options-menu.js.map
    M static/maps/mvc/library/library-folderlist-view.js.map
    M static/maps/mvc/library/library-foldertoolbar-view.js.map
    M static/maps/mvc/library/library-libraryrow-view.js.map
    M static/maps/mvc/tool/tool-form-base.js.map
    A static/maps/mvc/user/user_api_keys.js.map
    M static/maps/mvc/workflow/workflow-forms.js.map
    M static/maps/mvc/workflow/workflow-node.js.map
    M static/scripts/bundled/admin.bundled.js
    M static/scripts/bundled/admin.bundled.js.map
    A static/scripts/bundled/adminToolshed.bundled.js
    A static/scripts/bundled/adminToolshed.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    M static/scripts/bundled/analysis.bundled.js.map
    A static/scripts/bundled/library.bundled.js
    A static/scripts/bundled/library.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    M static/scripts/bundled/libs.bundled.js.map
    M static/scripts/bundled/login.bundled.js
    M static/scripts/bundled/login.bundled.js.map
    A static/scripts/bundled/masthead.bundled.js
    A static/scripts/bundled/masthead.bundled.js.map
    A static/scripts/bundled/viz.bundled.js
    A static/scripts/bundled/viz.bundled.js.map
    A static/scripts/bundled/workflow.bundled.js
    A static/scripts/bundled/workflow.bundled.js.map
    M static/scripts/galaxy.library.js
    M static/scripts/layout/panel.js
    R static/scripts/libs/bibtex.js
    A static/scripts/libs/bibtexParse.js
    A static/scripts/libs/vue.js
    R static/scripts/mvc/citation/citation-model.js
    R static/scripts/mvc/citation/citation-view.js
    M static/scripts/mvc/history/options-menu.js
    M static/scripts/mvc/library/library-folderlist-view.js
    M static/scripts/mvc/library/library-foldertoolbar-view.js
    M static/scripts/mvc/library/library-libraryrow-view.js
    M static/scripts/mvc/tool/tool-form-base.js
    M static/scripts/mvc/workflow/workflow-forms.js
    M static/scripts/mvc/workflow/workflow-node.js
    M static/style/blue/base.css
    M templates/webapps/galaxy/base_panels.mako
    M templates/webapps/galaxy/galaxy.masthead.mako
    M templates/webapps/galaxy/galaxy.panels.mako
    R templates/webapps/galaxy/history/citations.mako
    R templates/webapps/galaxy/user/list_users.mako
    M templates/webapps/galaxy/workflow/editor.mako
    M test/api/test_configuration.py
    M test/api/test_history_contents.py
    M test/api/test_workflows.py
    M test/functional/tools/create_2.xml
    M test/integration/test_data_manager_table_reload.py
    R test/qunit/Gruntfile.js
    R test/qunit/README.txt
    R test/qunit/package.json
    R test/qunit/scripts
    R test/qunit/test-app.js
    R test/qunit/test-common.js
    R test/qunit/test-data/bootstrapped.js
    R test/qunit/test-data/fakeserver.js
    R test/qunit/test-data/job-dag-1.js
    R test/qunit/test-data/paired-collection-creator.data.js
    R test/qunit/tests/form_tests.html
    R test/qunit/tests/form_tests.js
    R test/qunit/tests/galaxy-app-base.html
    R test/qunit/tests/galaxy-app-base.js
    R test/qunit/tests/graph.html
    R test/qunit/tests/graph.js
    R test/qunit/tests/hda-base.html
    R test/qunit/tests/hda-base.js
    R test/qunit/tests/history_contents_model_tests.html
    R test/qunit/tests/history_contents_model_tests.js
    R test/qunit/tests/job-dag.html
    R test/qunit/tests/job-dag.js
    R test/qunit/tests/list-of-pairs-collection-creator.html
    R test/qunit/tests/list-of-pairs-collection-creator.js
    R test/qunit/tests/masthead_tests.html
    R test/qunit/tests/masthead_tests.js
    R test/qunit/tests/metrics-logger.html
    R test/qunit/tests/metrics-logger.js
    R test/qunit/tests/modal_tests.html
    R test/qunit/tests/modal_tests.js
    R test/qunit/tests/page_tests.html
    R test/qunit/tests/page_tests.js
    R test/qunit/tests/popover_tests.html
    R test/qunit/tests/popover_tests.js
    R test/qunit/tests/ui_tests.html
    R test/qunit/tests/ui_tests.js
    R test/qunit/tests/upload_dialog_tests.html
    R test/qunit/tests/upload_dialog_tests.js
    R test/qunit/tests/utils_test.html
    R test/qunit/tests/utils_test.js
    R test/qunit/tests/workflow_editor_tests.html
    R test/qunit/tests/workflow_editor_tests.js
    M tools/stats/gsummary.py
    M tox.ini

  Log Message:
  -----------
  Merge branch 'dev' into remove_unused_workflow_endpoint


  Commit: 476579648ac15e4c3e1da8761bee9fba1b47c20e
      https://github.com/galaxyproject/galaxy/commit/476579648ac15e4c3e1da8761bee9...
  Author: guerler <aysam.guerler@gmail.com>
  Date:   2017-11-22 (Wed, 22 Nov 2017)

  Changed paths:
    M .gitignore
    M client/gulpfile.js
    M client/webpack.config.js
    R static/maps/admin.toolshed.js.map
    R static/maps/analysis.js.map
    R static/maps/app.js.map
    R static/maps/app/analysis.js.map
    R static/maps/galaxy-app-base.js.map
    R static/maps/galaxy.interactive_environments.js.map
    R static/maps/galaxy.js.map
    R static/maps/galaxy.library.js.map
    R static/maps/galaxy.menu.js.map
    R static/maps/galaxy.pages.js.map
    R static/maps/i18n.js.map
    R static/maps/layout/generic-nav-view.js.map
    R static/maps/layout/masthead.js.map
    R static/maps/layout/menu.js.map
    R static/maps/layout/modal.js.map
    R static/maps/layout/page.js.map
    R static/maps/layout/panel.js.map
    R static/maps/layout/router.js.map
    R static/maps/layout/scratchbook.js.map
    R static/maps/libs/backbone.js.map
    R static/maps/libs/bbi/bigwig.js.map
    R static/maps/libs/bbi/jquery-ajax-native.js.map
    R static/maps/libs/bbi/jszlib.js.map
    R static/maps/libs/bbi/spans.js.map
    R static/maps/libs/bibtex.js.map
    R static/maps/libs/bootstrap-tour.js.map
    R static/maps/libs/bootstrap.js.map
    R static/maps/libs/common-libs.js.map
    R static/maps/libs/d3.js.map
    R static/maps/libs/farbtastic.js.map
    R static/maps/libs/jquery.complexify.js.map
    R static/maps/libs/jquery.sparklines.js.map
    R static/maps/libs/jquery/jquery-ui.js.map
    R static/maps/libs/jquery/jquery.autocomplete.js.map
    R static/maps/libs/jquery/jquery.complexify.js.map
    R static/maps/libs/jquery/jquery.cookie.js.map
    R static/maps/libs/jquery/jquery.dynatree.js.map
    R static/maps/libs/jquery/jquery.event.drag.js.map
    R static/maps/libs/jquery/jquery.event.drop.js.map
    R static/maps/libs/jquery/jquery.event.hover.js.map
    R static/maps/libs/jquery/jquery.form.js.map
    R static/maps/libs/jquery/jquery.js.map
    R static/maps/libs/jquery/jquery.migrate.js.map
    R static/maps/libs/jquery/jquery.mousewheel.js.map
    R static/maps/libs/jquery/jquery.rating.js.map
    R static/maps/libs/jquery/jquery.wymeditor.js.map
    R static/maps/libs/jquery/jstorage.js.map
    R static/maps/libs/jquery/jstree.js.map
    R static/maps/libs/jquery/select2.js.map
    R static/maps/libs/raven.js.map
    R static/maps/libs/require.js.map
    R static/maps/libs/showdown.js.map
    R static/maps/libs/toastr.js.map
    R static/maps/libs/underscore.js.map
    R static/maps/mvc/annotation.js.map
    R static/maps/mvc/base-mvc.js.map
    R static/maps/mvc/base/controlled-fetch-collection.js.map
    R static/maps/mvc/citation/citation-model.js.map
    R static/maps/mvc/citation/citation-view.js.map
    R static/maps/mvc/citations.js.map
    R static/maps/mvc/collection/base-creator.js.map
    R static/maps/mvc/collection/collection-li-edit.js.map
    R static/maps/mvc/collection/collection-li.js.map
    R static/maps/mvc/collection/collection-model.js.map
    R static/maps/mvc/collection/collection-view-edit.js.map
    R static/maps/mvc/collection/collection-view.js.map
    R static/maps/mvc/collection/list-collection-creator.js.map
    R static/maps/mvc/collection/list-of-pairs-collection-creator.js.map
    R static/maps/mvc/collection/pair-collection-creator.js.map
    R static/maps/mvc/collection/paired-collection-creator.js.map
    R static/maps/mvc/dataset/data.js.map
    R static/maps/mvc/dataset/dataset-choice.js.map
    R static/maps/mvc/dataset/dataset-edit-attributes.js.map
    R static/maps/mvc/dataset/dataset-error.js.map
    R static/maps/mvc/dataset/dataset-li-edit.js.map
    R static/maps/mvc/dataset/dataset-li.js.map
    R static/maps/mvc/dataset/dataset-list.js.map
    R static/maps/mvc/dataset/dataset-model.js.map
    R static/maps/mvc/dataset/states.js.map
    R static/maps/mvc/form/form-data.js.map
    R static/maps/mvc/form/form-input.js.map
    R static/maps/mvc/form/form-parameters.js.map
    R static/maps/mvc/form/form-repeat.js.map
    R static/maps/mvc/form/form-section.js.map
    R static/maps/mvc/form/form-view.js.map
    R static/maps/mvc/form/form-wrapper.js.map
    R static/maps/mvc/grid/grid-model.js.map
    R static/maps/mvc/grid/grid-shared.js.map
    R static/maps/mvc/grid/grid-template.js.map
    R static/maps/mvc/grid/grid-view.js.map
    R static/maps/mvc/groups/group-detail-view.js.map
    R static/maps/mvc/groups/group-groupdetail-view.js.map
    R static/maps/mvc/groups/group-grouprow-view.js.map
    R static/maps/mvc/groups/group-list-view.js.map
    R static/maps/mvc/groups/group-listrow-view.js.map
    R static/maps/mvc/groups/group-model.js.map
    R static/maps/mvc/groups/group.model.js.map
    R static/maps/mvc/history/copy-dialog.js.map
    R static/maps/mvc/history/hda-li-edit.js.map
    R static/maps/mvc/history/hda-li.js.map
    R static/maps/mvc/history/hda-model.js.map
    R static/maps/mvc/history/hdca-li-edit.js.map
    R static/maps/mvc/history/hdca-li.js.map
    R static/maps/mvc/history/hdca-model.js.map
    R static/maps/mvc/history/history-content-model.js.map
    R static/maps/mvc/history/history-contents.js.map
    R static/maps/mvc/history/history-item-li.js.map
    R static/maps/mvc/history/history-list.js.map
    R static/maps/mvc/history/history-model.js.map
    R static/maps/mvc/history/history-preferences.js.map
    R static/maps/mvc/history/history-structure-view.js.map
    R static/maps/mvc/history/history-view-annotated.js.map
    R static/maps/mvc/history/history-view-edit-current.js.map
    R static/maps/mvc/history/history-view-edit.js.map
    R static/maps/mvc/history/history-view.js.map
    R static/maps/mvc/history/job-dag.js.map
    R static/maps/mvc/history/multi-panel.js.map
    R static/maps/mvc/history/options-menu.js.map
    R static/maps/mvc/job/job-li.js.map
    R static/maps/mvc/job/job-model.js.map
    R static/maps/mvc/job/job-params.js.map
    R static/maps/mvc/lazy/lazy-limited.js.map
    R static/maps/mvc/library/library-dataset-view.js.map
    R static/maps/mvc/library/library-folder-view.js.map
    R static/maps/mvc/library/library-folderlist-view.js.map
    R static/maps/mvc/library/library-folderrow-view.js.map
    R static/maps/mvc/library/library-foldertoolbar-view.js.map
    R static/maps/mvc/library/library-library-view.js.map
    R static/maps/mvc/library/library-librarylist-view.js.map
    R static/maps/mvc/library/library-libraryrow-view.js.map
    R static/maps/mvc/library/library-librarytoolbar-view.js.map
    R static/maps/mvc/library/library-model.js.map
    R static/maps/mvc/library/library-util.js.map
    R static/maps/mvc/list/list-item.js.map
    R static/maps/mvc/list/list-panel.js.map
    R static/maps/mvc/list/list-view.js.map
    R static/maps/mvc/page/page-list.js.map
    R static/maps/mvc/tag.js.map
    R static/maps/mvc/tool/tool-form-base.js.map
    R static/maps/mvc/tool/tool-form-composite.js.map
    R static/maps/mvc/tool/tool-form.js.map
    R static/maps/mvc/tool/tool-genomespace.js.map
    R static/maps/mvc/tool/tool-template.js.map
    R static/maps/mvc/tool/tool-webhooks.js.map
    R static/maps/mvc/tool/tools.js.map
    R static/maps/mvc/toolshed/categories-view.js.map
    R static/maps/mvc/toolshed/repo-queue-view.js.map
    R static/maps/mvc/toolshed/repo-status-view.js.map
    R static/maps/mvc/toolshed/repositories-view.js.map
    R static/maps/mvc/toolshed/repository-queue-view.js.map
    R static/maps/mvc/toolshed/repository-view.js.map
    R static/maps/mvc/toolshed/shed-category-view.js.map
    R static/maps/mvc/toolshed/shed-list-view.js.map
    R static/maps/mvc/toolshed/shed-repo-details-view.js.map
    R static/maps/mvc/toolshed/shed-repo-list-view.js.map
    R static/maps/mvc/toolshed/sheds-list-view.js.map
    R static/maps/mvc/toolshed/toolshed-model.js.map
    R static/maps/mvc/toolshed/util.js.map
    R static/maps/mvc/toolshed/workflows-view.js.map
    R static/maps/mvc/tours.js.map
    R static/maps/mvc/ui/error-modal.js.map
    R static/maps/mvc/ui/icon-button.js.map
    R static/maps/mvc/ui/popup-menu.js.map
    R static/maps/mvc/ui/ui-buttons.js.map
    R static/maps/mvc/ui/ui-color-picker.js.map
    R static/maps/mvc/ui/ui-drilldown.js.map
    R static/maps/mvc/ui/ui-frames.js.map
    R static/maps/mvc/ui/ui-list.js.map
    R static/maps/mvc/ui/ui-misc.js.map
    R static/maps/mvc/ui/ui-modal.js.map
    R static/maps/mvc/ui/ui-options.js.map
    R static/maps/mvc/ui/ui-popover.js.map
    R static/maps/mvc/ui/ui-portlet.js.map
    R static/maps/mvc/ui/ui-select-content.js.map
    R static/maps/mvc/ui/ui-select-default.js.map
    R static/maps/mvc/ui/ui-select-ftp.js.map
    R static/maps/mvc/ui/ui-select-genomespace.js.map
    R static/maps/mvc/ui/ui-select-library.js.map
    R static/maps/mvc/ui/ui-select.js.map
    R static/maps/mvc/ui/ui-slider.js.map
    R static/maps/mvc/ui/ui-table.js.map
    R static/maps/mvc/ui/ui-tabs.js.map
    R static/maps/mvc/ui/ui-thumbnails.js.map
    R static/maps/mvc/upload/collection/collection-row.js.map
    R static/maps/mvc/upload/collection/collection-view.js.map
    R static/maps/mvc/upload/composite/composite-row.js.map
    R static/maps/mvc/upload/composite/composite-view.js.map
    R static/maps/mvc/upload/default/default-row.js.map
    R static/maps/mvc/upload/default/default-view.js.map
    R static/maps/mvc/upload/upload-button.js.map
    R static/maps/mvc/upload/upload-extension.js.map
    R static/maps/mvc/upload/upload-ftp.js.map
    R static/maps/mvc/upload/upload-model.js.map
    R static/maps/mvc/upload/upload-row.js.map
    R static/maps/mvc/upload/upload-settings.js.map
    R static/maps/mvc/upload/upload-view.js.map
    R static/maps/mvc/user/change-password.js.map
    R static/maps/mvc/user/extra-information.js.map
    R static/maps/mvc/user/manage-user-information.js.map
    R static/maps/mvc/user/user-custom-builds.js.map
    R static/maps/mvc/user/user-model.js.map
    R static/maps/mvc/user/user-preferences.js.map
    R static/maps/mvc/user/user-quotameter.js.map
    R static/maps/mvc/user/user_api_keys.js.map
    R static/maps/mvc/visualization/visualization-model.js.map
    R static/maps/mvc/webhooks.js.map
    R static/maps/mvc/workflow/workflow-canvas.js.map
    R static/maps/mvc/workflow/workflow-configure-menu.js.map
    R static/maps/mvc/workflow/workflow-connector.js.map
    R static/maps/mvc/workflow/workflow-forms.js.map
    R static/maps/mvc/workflow/workflow-icons.js.map
    R static/maps/mvc/workflow/workflow-manager.js.map
    R static/maps/mvc/workflow/workflow-model.js.map
    R static/maps/mvc/workflow/workflow-node.js.map
    R static/maps/mvc/workflow/workflow-terminals.js.map
    R static/maps/mvc/workflow/workflow-view-data.js.map
    R static/maps/mvc/workflow/workflow-view-node.js.map
    R static/maps/mvc/workflow/workflow-view-terminals.js.map
    R static/maps/mvc/workflow/workflow-view.js.map
    R static/maps/mvc/workflow/workflow.js.map
    R static/maps/nls/de/locale.js.map
    R static/maps/nls/es/locale.js.map
    R static/maps/nls/fr/locale.js.map
    R static/maps/nls/ja/locale.js.map
    R static/maps/nls/locale.js.map
    R static/maps/nls/zh/locale.js.map
    R static/maps/onload.js.map
    R static/maps/polyfills.js.map
    R static/maps/reports_webapp/run_stats.js.map
    R static/maps/templates/compiled/panel_section.js.map
    R static/maps/templates/compiled/tool_form.js.map
    R static/maps/templates/compiled/tool_link.js.map
    R static/maps/templates/compiled/tool_search.js.map
    R static/maps/toolshed.groups.js.map
    R static/maps/ui/autocom_tagging.js.map
    R static/maps/ui/editable-text.js.map
    R static/maps/ui/fa-icon-button.js.map
    R static/maps/ui/filter-control.js.map
    R static/maps/ui/hoverhighlight.js.map
    R static/maps/ui/loading-indicator.js.map
    R static/maps/ui/mode-button.js.map
    R static/maps/ui/pagination.js.map
    R static/maps/ui/peek-column-selector.js.map
    R static/maps/ui/popupmenu.js.map
    R static/maps/ui/scroll-panel.js.map
    R static/maps/ui/search-input.js.map
    R static/maps/utils/add-logging.js.map
    R static/maps/utils/ajax-queue.js.map
    R static/maps/utils/async-save-text.js.map
    R static/maps/utils/config.js.map
    R static/maps/utils/deferred.js.map
    R static/maps/utils/graph.js.map
    R static/maps/utils/levenshtein.js.map
    R static/maps/utils/localization.js.map
    R static/maps/utils/metrics-logger.js.map
    R static/maps/utils/natural-sort.js.map
    R static/maps/utils/query-string-parsing.js.map
    R static/maps/utils/uploadbox.js.map
    R static/maps/utils/utils.js.map
    R static/maps/viz/bbi-data-manager.js.map
    R static/maps/viz/circster.js.map
    R static/maps/viz/phyloviz.js.map
    R static/maps/viz/sweepster.js.map
    R static/maps/viz/trackster.js.map
    R static/maps/viz/trackster/filters.js.map
    R static/maps/viz/trackster/painters.js.map
    R static/maps/viz/trackster/slotting.js.map
    R static/maps/viz/trackster/tracks.js.map
    R static/maps/viz/trackster/util.js.map
    R static/maps/viz/visualization.js.map
    R static/maps/viz/viz_views.js.map
    M static/scripts/admin.toolshed.js
    M static/scripts/bundled/admin.bundled.js
    R static/scripts/bundled/admin.bundled.js.map
    M static/scripts/bundled/adminToolshed.bundled.js
    R static/scripts/bundled/adminToolshed.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    R static/scripts/bundled/analysis.bundled.js.map
    M static/scripts/bundled/library.bundled.js
    R static/scripts/bundled/library.bundled.js.map
    M static/scripts/bundled/libs.bundled.js
    R static/scripts/bundled/libs.bundled.js.map
    M static/scripts/bundled/login.bundled.js
    R static/scripts/bundled/login.bundled.js.map
    M static/scripts/bundled/masthead.bundled.js
    R static/scripts/bundled/masthead.bundled.js.map
    M static/scripts/bundled/viz.bundled.js
    R static/scripts/bundled/viz.bundled.js.map
    M static/scripts/bundled/workflow.bundled.js
    R static/scripts/bundled/workflow.bundled.js.map
    M static/scripts/galaxy.interactive_environments.js
    M static/scripts/galaxy.js
    M static/scripts/galaxy.library.js
    M static/scripts/galaxy.pages.js
    M static/scripts/i18n.js
    M static/scripts/layout/generic-nav-view.js
    M static/scripts/layout/masthead.js
    M static/scripts/layout/menu.js
    M static/scripts/layout/modal.js
    M static/scripts/layout/page.js
    M static/scripts/layout/panel.js
    M static/scripts/layout/router.js
    M static/scripts/layout/scratchbook.js
    M static/scripts/mvc/annotation.js
    M static/scripts/mvc/base-mvc.js
    M static/scripts/mvc/base/controlled-fetch-collection.js
    M static/scripts/mvc/collection/base-creator.js
    M static/scripts/mvc/collection/collection-li-edit.js
    M static/scripts/mvc/collection/collection-li.js
    M static/scripts/mvc/collection/collection-model.js
    M static/scripts/mvc/collection/collection-view-edit.js
    M static/scripts/mvc/collection/collection-view.js
    M static/scripts/mvc/collection/list-collection-creator.js
    M static/scripts/mvc/collection/list-of-pairs-collection-creator.js
    M static/scripts/mvc/collection/pair-collection-creator.js
    M static/scripts/mvc/dataset/data.js
    M static/scripts/mvc/dataset/dataset-choice.js
    M static/scripts/mvc/dataset/dataset-edit-attributes.js
    M static/scripts/mvc/dataset/dataset-error.js
    M static/scripts/mvc/dataset/dataset-li-edit.js
    M static/scripts/mvc/dataset/dataset-li.js
    M static/scripts/mvc/dataset/dataset-list.js
    M static/scripts/mvc/dataset/dataset-model.js
    M static/scripts/mvc/dataset/states.js
    M static/scripts/mvc/form/form-data.js
    M static/scripts/mvc/form/form-input.js
    M static/scripts/mvc/form/form-parameters.js
    M static/scripts/mvc/form/form-repeat.js
    M static/scripts/mvc/form/form-section.js
    M static/scripts/mvc/form/form-view.js
    M static/scripts/mvc/form/form-wrapper.js
    M static/scripts/mvc/grid/grid-model.js
    M static/scripts/mvc/grid/grid-shared.js
    M static/scripts/mvc/grid/grid-template.js
    M static/scripts/mvc/grid/grid-view.js
    M static/scripts/mvc/history/copy-dialog.js
    M static/scripts/mvc/history/hda-li-edit.js
    M static/scripts/mvc/history/hda-li.js
    M static/scripts/mvc/history/hda-model.js
    M static/scripts/mvc/history/hdca-li-edit.js
    M static/scripts/mvc/history/hdca-li.js
    M static/scripts/mvc/history/hdca-model.js
    M static/scripts/mvc/history/history-content-model.js
    M static/scripts/mvc/history/history-contents.js
    M static/scripts/mvc/history/history-item-li.js
    M static/scripts/mvc/history/history-list.js
    M static/scripts/mvc/history/history-model.js
    M static/scripts/mvc/history/history-preferences.js
    M static/scripts/mvc/history/history-structure-view.js
    M static/scripts/mvc/history/history-view-annotated.js
    M static/scripts/mvc/history/history-view-edit-current.js
    M static/scripts/mvc/history/history-view-edit.js
    M static/scripts/mvc/history/history-view.js
    M static/scripts/mvc/history/job-dag.js
    M static/scripts/mvc/history/multi-panel.js
    M static/scripts/mvc/history/options-menu.js
    M static/scripts/mvc/job/job-li.js
    M static/scripts/mvc/job/job-model.js
    M static/scripts/mvc/job/job-params.js
    M static/scripts/mvc/lazy/lazy-limited.js
    M static/scripts/mvc/library/library-dataset-view.js
    M static/scripts/mvc/library/library-folder-view.js
    M static/scripts/mvc/library/library-folderlist-view.js
    M static/scripts/mvc/library/library-folderrow-view.js
    M static/scripts/mvc/library/library-foldertoolbar-view.js
    M static/scripts/mvc/library/library-library-view.js
    M static/scripts/mvc/library/library-librarylist-view.js
    M static/scripts/mvc/library/library-libraryrow-view.js
    M static/scripts/mvc/library/library-librarytoolbar-view.js
    M static/scripts/mvc/library/library-model.js
    M static/scripts/mvc/library/library-util.js
    M static/scripts/mvc/list/list-item.js
    M static/scripts/mvc/list/list-view.js
    M static/scripts/mvc/tag.js
    M static/scripts/mvc/tool/tool-form-base.js
    M static/scripts/mvc/tool/tool-form-composite.js
    M static/scripts/mvc/tool/tool-form.js
    M static/scripts/mvc/tool/tool-genomespace.js
    M static/scripts/mvc/tool/tools.js
    M static/scripts/mvc/toolshed/categories-view.js
    M static/scripts/mvc/toolshed/repo-queue-view.js
    M static/scripts/mvc/toolshed/repo-status-view.js
    M static/scripts/mvc/toolshed/repositories-view.js
    M static/scripts/mvc/toolshed/repository-queue-view.js
    M static/scripts/mvc/toolshed/repository-view.js
    M static/scripts/mvc/toolshed/shed-list-view.js
    M static/scripts/mvc/toolshed/toolshed-model.js
    M static/scripts/mvc/toolshed/util.js
    M static/scripts/mvc/toolshed/workflows-view.js
    M static/scripts/mvc/tours.js
    M static/scripts/mvc/ui/error-modal.js
    M static/scripts/mvc/ui/icon-button.js
    M static/scripts/mvc/ui/popup-menu.js
    M static/scripts/mvc/ui/ui-buttons.js
    M static/scripts/mvc/ui/ui-color-picker.js
    M static/scripts/mvc/ui/ui-drilldown.js
    M static/scripts/mvc/ui/ui-frames.js
    M static/scripts/mvc/ui/ui-list.js
    M static/scripts/mvc/ui/ui-misc.js
    M static/scripts/mvc/ui/ui-modal.js
    M static/scripts/mvc/ui/ui-options.js
    M static/scripts/mvc/ui/ui-popover.js
    M static/scripts/mvc/ui/ui-portlet.js
    M static/scripts/mvc/ui/ui-select-content.js
    M static/scripts/mvc/ui/ui-select-default.js
    M static/scripts/mvc/ui/ui-select-ftp.js
    M static/scripts/mvc/ui/ui-select-genomespace.js
    M static/scripts/mvc/ui/ui-select-library.js
    M static/scripts/mvc/ui/ui-select.js
    M static/scripts/mvc/ui/ui-slider.js
    M static/scripts/mvc/ui/ui-table.js
    M static/scripts/mvc/ui/ui-tabs.js
    M static/scripts/mvc/ui/ui-thumbnails.js
    M static/scripts/mvc/upload/collection/collection-row.js
    M static/scripts/mvc/upload/collection/collection-view.js
    M static/scripts/mvc/upload/composite/composite-row.js
    M static/scripts/mvc/upload/composite/composite-view.js
    M static/scripts/mvc/upload/default/default-row.js
    M static/scripts/mvc/upload/default/default-view.js
    M static/scripts/mvc/upload/upload-button.js
    M static/scripts/mvc/upload/upload-extension.js
    M static/scripts/mvc/upload/upload-ftp.js
    M static/scripts/mvc/upload/upload-model.js
    M static/scripts/mvc/upload/upload-settings.js
    M static/scripts/mvc/upload/upload-view.js
    M static/scripts/mvc/user/user-custom-builds.js
    M static/scripts/mvc/user/user-model.js
    M static/scripts/mvc/user/user-preferences.js
    M static/scripts/mvc/user/user-quotameter.js
    M static/scripts/mvc/visualization/visualization-model.js
    M static/scripts/mvc/webhooks.js
    M static/scripts/mvc/workflow/workflow-canvas.js
    M static/scripts/mvc/workflow/workflow-connector.js
    M static/scripts/mvc/workflow/workflow-forms.js
    M static/scripts/mvc/workflow/workflow-icons.js
    M static/scripts/mvc/workflow/workflow-manager.js
    M static/scripts/mvc/workflow/workflow-model.js
    M static/scripts/mvc/workflow/workflow-node.js
    M static/scripts/mvc/workflow/workflow-terminals.js
    M static/scripts/mvc/workflow/workflow-view-data.js
    M static/scripts/mvc/workflow/workflow-view-node.js
    M static/scripts/mvc/workflow/workflow-view-terminals.js
    M static/scripts/mvc/workflow/workflow-view.js
    M static/scripts/mvc/workflow/workflow.js
    M static/scripts/nls/de/locale.js
    M static/scripts/nls/es/locale.js
    M static/scripts/nls/fr/locale.js
    M static/scripts/nls/ja/locale.js
    M static/scripts/nls/locale.js
    M static/scripts/nls/zh/locale.js
    M static/scripts/onload.js
    M static/scripts/polyfills.js
    M static/scripts/reports_webapp/run_stats.js
    M static/scripts/ui/autocom_tagging.js
    M static/scripts/ui/editable-text.js
    M static/scripts/ui/fa-icon-button.js
    M static/scripts/ui/filter-control.js
    M static/scripts/ui/hoverhighlight.js
    M static/scripts/ui/loading-indicator.js
    M static/scripts/ui/mode-button.js
    M static/scripts/ui/pagination.js
    M static/scripts/ui/peek-column-selector.js
    M static/scripts/ui/popupmenu.js
    M static/scripts/ui/scroll-panel.js
    M static/scripts/ui/search-input.js
    M static/scripts/utils/add-logging.js
    M static/scripts/utils/ajax-queue.js
    M static/scripts/utils/async-save-text.js
    M static/scripts/utils/config.js
    M static/scripts/utils/deferred.js
    M static/scripts/utils/graph.js
    M static/scripts/utils/levenshtein.js
    M static/scripts/utils/localization.js
    M static/scripts/utils/metrics-logger.js
    M static/scripts/utils/natural-sort.js
    M static/scripts/utils/query-string-parsing.js
    M static/scripts/utils/uploadbox.js
    M static/scripts/utils/utils.js
    M static/scripts/viz/bbi-data-manager.js
    M static/scripts/viz/circster.js
    M static/scripts/viz/phyloviz.js
    M static/scripts/viz/sweepster.js
    M static/scripts/viz/trackster.js
    M static/scripts/viz/trackster/filters.js
    M static/scripts/viz/trackster/painters.js
    M static/scripts/viz/trackster/slotting.js
    M static/scripts/viz/trackster/tracks.js
    M static/scripts/viz/trackster/util.js
    M static/scripts/viz/visualization.js
    M static/scripts/viz/viz_views.js

  Log Message:
  -----------
  Merge branch 'dev' into remove_unused_workflow_endpoint


  Commit: e03ea6d7819700446d1f19fef8d1982366c60faf
      https://github.com/galaxyproject/galaxy/commit/e03ea6d7819700446d1f19fef8d19...
  Author: John Chilton <jmchilton@gmail.com>
  Date:   2017-11-24 (Fri, 24 Nov 2017)

  Changed paths:
    M client/galaxy/scripts/apps/analysis.js
    M client/galaxy/scripts/apps/panels/tool-panel.js
    M client/galaxy/scripts/layout/menu.js
    M client/galaxy/scripts/mvc/form/form-wrapper.js
    M client/galaxy/scripts/mvc/tag.js
    M client/galaxy/scripts/mvc/workflow/workflow-view.js
    M client/galaxy/scripts/mvc/workflow/workflow.js
    M lib/galaxy/webapps/galaxy/buildapp.py
    M lib/galaxy/webapps/galaxy/controllers/workflow.py
    R static/maps/galaxy.library.js.map
    R static/maps/layout/panel.js.map
    R static/maps/mvc/citation/citation-model.js.map
    R static/maps/mvc/citation/citation-view.js.map
    R static/maps/mvc/citations.js.map
    R static/maps/mvc/history/options-menu.js.map
    R static/maps/mvc/library/library-folderlist-view.js.map
    R static/maps/mvc/library/library-foldertoolbar-view.js.map
    R static/maps/mvc/library/library-libraryrow-view.js.map
    R static/maps/mvc/tool/tool-form-base.js.map
    R static/maps/mvc/user/user_api_keys.js.map
    M static/scripts/bundled/admin.bundled.js
    R static/scripts/bundled/admin.bundled.js.map
    R static/scripts/bundled/adminToolshed.bundled.js.map
    M static/scripts/bundled/analysis.bundled.js
    R static/scripts/bundled/analysis.bundled.js.map
    R static/scripts/bundled/library.bundled.js.map
    R static/scripts/bundled/libs.bundled.js.map
    M static/scripts/bundled/login.bundled.js
    R static/scripts/bundled/login.bundled.js.map
    M static/scripts/bundled/masthead.bundled.js
    R static/scripts/bundled/masthead.bundled.js.map
    R static/scripts/bundled/viz.bundled.js.map
    M static/scripts/bundled/workflow.bundled.js
    R static/scripts/bundled/workflow.bundled.js.map
    M static/scripts/layout/menu.js
    M static/scripts/mvc/form/form-wrapper.js
    M static/scripts/mvc/tag.js
    M static/scripts/mvc/workflow/workflow-view.js
    M static/scripts/mvc/workflow/workflow.js
    M test/selenium_tests/test_workflow_editor.py
    M test/shed_functional/base/twilltestcase.py

  Log Message:
  -----------
  Merge pull request #4996 from guerler/remove_unused_workflow_endpoint

Revise workflow create form, remove unused rename endpoint


Compare: https://github.com/galaxyproject/galaxy/compare/5c6e4a5c77c0...e03ea6d78197

[galaxy-commits] [galaxyproject/galaxy] b7482a: Remove unused workflow rename controller endpoint

GitHub