Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 48064cc20352d3e38f985769ba5b2eeb66f051a8 https://github.com/galaxyproject/galaxy/commit/48064cc20352d3e38f985769ba5b2... Author: Peter van Heusden <pvh@sanbi.ac.za> Date: 2015-12-07 (Mon, 07 Dec 2015) Changed paths: M config/dependency_resolvers_conf.xml.sample Log Message: ----------- * Clarify comment in XML Commit: e40fbe5374f906139f8be7a3ceb001f049a6b244 https://github.com/galaxyproject/galaxy/commit/e40fbe5374f906139f8be7a3ceb00... Author: Peter van Heusden <pvh@sanbi.ac.za> Date: 2015-12-11 (Fri, 11 Dec 2015) Changed paths: M config/dependency_resolvers_conf.xml.sample A doc/source/admin/dependency_resolvers.rst M doc/source/admin/index.rst Log Message: ----------- * Add comment about base_path in sample config * Add documentation on dependency resolvers Commit: 584d886b5ee68257921dff24c4dbe0a2dbb0c00c https://github.com/galaxyproject/galaxy/commit/584d886b5ee68257921dff24c4dbe... Author: Peter van Heusden <pvh@sanbi.ac.za> Date: 2015-12-11 (Fri, 11 Dec 2015) Changed paths: M doc/source/admin/dependency_resolvers.rst M lib/galaxy/tools/deps/__init__.py M lib/galaxy/tools/deps/resolvers/modules.py Log Message: ----------- * Mention modulepath attribute in dependency resolver docs * Use modulepath in both environment modules resolvers * Export MODULEPATH in generated shell command * Add logging for operation of dependency resolvers Commit: 035f1b5d663841fa61d32ba79e1b43553dab4fab https://github.com/galaxyproject/galaxy/commit/035f1b5d663841fa61d32ba79e1b4... Author: Peter van Heusden <pvh@sanbi.ac.za> Date: 2015-12-11 (Fri, 11 Dec 2015) Changed paths: M doc/source/admin/dependency_resolvers.rst M lib/galaxy/tools/deps/__init__.py M lib/galaxy/tools/deps/resolvers/modules.py M test/unit/tools/test_tool_deps.py Log Message: ----------- * Incorporate documentation fixes from nsoranzo * Replace {} and .format with %s and % to preserve Python 2.6 compatibility * Add a modulepath= paranter to the fake resolver (Bunch object) used to test the modules dependency resolver Commit: 2b90ca9b0e23715bd7a03614fa989bcf540f73e9 https://github.com/galaxyproject/galaxy/commit/2b90ca9b0e23715bd7a03614fa989... Author: Peter van Heusden <pvh@sanbi.ac.za> Date: 2015-12-11 (Fri, 11 Dec 2015) Changed paths: M lib/galaxy/tools/deps/__init__.py Log Message: ----------- * Replaced incorrect %b with %s Commit: 73b6fb23db300501c9124c61c90d73d2c28dc7a4 https://github.com/galaxyproject/galaxy/commit/73b6fb23db300501c9124c61c90d7... Author: Peter van Heusden <pvh@sanbi.ac.za> Date: 2015-12-11 (Fri, 11 Dec 2015) Changed paths: M doc/source/admin/dependency_resolvers.rst Log Message: ----------- * Replaced all references to "version number" with "version string" Commit: 6580d5129386ab5b8634583c5378dfc340ed2800 https://github.com/galaxyproject/galaxy/commit/6580d5129386ab5b8634583c5378d... Author: John Chilton <jmchilton@gmail.com> Date: 2015-12-11 (Fri, 11 Dec 2015) Changed paths: M config/dependency_resolvers_conf.xml.sample A doc/source/admin/dependency_resolvers.rst M doc/source/admin/index.rst M lib/galaxy/tools/deps/__init__.py M lib/galaxy/tools/deps/resolvers/modules.py M test/unit/tools/test_tool_deps.py Log Message: ----------- Merge pull request #1296 from pvanheus/env-modules-resolve Documentation for dependency resolvers Compare: https://github.com/galaxyproject/galaxy/compare/bca004eff860...6580d5129386