Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 8d5a315671b6fd1c475abc88f454a7c3bfb434f4 https://github.com/galaxyproject/galaxy/commit/8d5a315671b6fd1c475abc88f454a... Author: mvdbeek <m.vandenbeek@gmail.com> Date: 2017-08-03 (Thu, 03 Aug 2017) Changed paths: M lib/galaxy/tools/toolbox/base.py Log Message: ----------- Register tool lineage when loading tool via quick_load() Commit: 51951a8850888d0d5538ef5f84327bb78ccbfba6 https://github.com/galaxyproject/galaxy/commit/51951a8850888d0d5538ef5f84327... Author: mvdbeek <m.vandenbeek@gmail.com> Date: 2017-08-03 (Thu, 03 Aug 2017) Changed paths: M lib/galaxy/jobs/rule_helper.py M lib/galaxy/model/__init__.py M lib/galaxy/webapps/galaxy/controllers/dataset.py M templates/webapps/galaxy/history/display_structured.mako M templates/webapps/galaxy/workflow/build_from_current_history.mako Log Message: ----------- Always use tool version to get tools from toolbox This fixes a bug when getting parameters for jobs that were executed with old tool versions. Commit: faee2b65c29ee405d475d54a630d54c7b29a4159 https://github.com/galaxyproject/galaxy/commit/faee2b65c29ee405d475d54a630d5... Author: mvdbeek <m.vandenbeek@gmail.com> Date: 2017-08-04 (Fri, 04 Aug 2017) Changed paths: M lib/galaxy/model/__init__.py Log Message: ----------- Use self.job instead of self.parent_job in Task Noticed by @nsoranzo. Commit: 7474474cc0ec8f98a0e23bfd7bf2906326938153 https://github.com/galaxyproject/galaxy/commit/7474474cc0ec8f98a0e23bfd7bf29... Author: mvdbeek <m.vandenbeek@gmail.com> Date: 2017-08-04 (Fri, 04 Aug 2017) Changed paths: M lib/galaxy/tools/toolbox/base.py Log Message: ----------- Move tool lineage registration to toolbox.__add_tool() Commit: ccad70c22c082b3801dec567600f054581e8044b https://github.com/galaxyproject/galaxy/commit/ccad70c22c082b3801dec567600f0... Author: mvdbeek <m.vandenbeek@gmail.com> Date: 2017-08-04 (Fri, 04 Aug 2017) Changed paths: M lib/galaxy/tools/toolbox/base.py Log Message: ----------- Add warnings if a tool lineage could not be retrieved Commit: 575696dcc2cc775e72b58f5cda0612a79b62b87b https://github.com/galaxyproject/galaxy/commit/575696dcc2cc775e72b58f5cda061... Author: Martin Cech <marten@bx.psu.edu> Date: 2017-08-04 (Fri, 04 Aug 2017) Changed paths: M lib/galaxy/jobs/rule_helper.py M lib/galaxy/model/__init__.py M lib/galaxy/tools/toolbox/base.py M lib/galaxy/webapps/galaxy/controllers/dataset.py M templates/webapps/galaxy/history/display_structured.mako M templates/webapps/galaxy/workflow/build_from_current_history.mako Log Message: ----------- Merge pull request #4375 from mvdbeek/tool_version_and_lineage_fixes Tool version and lineage fixes Compare: https://github.com/galaxyproject/galaxy/compare/dbd057f9d720...575696dcc2cc