1 new changeset in galaxy-central: http://bitbucket.org/galaxy/galaxy-central/changeset/1ab3dfb5d929/ changeset: 1ab3dfb5d929 branches: user: jgoecks date: 2011-06-06 15:37:06 summary: Disable update check in cuffdiff wrapper. affected #: 1 file (36 bytes) --- a/tools/ngs_rna/cuffdiff_wrapper.py Mon Jun 06 09:08:59 2011 -0400 +++ b/tools/ngs_rna/cuffdiff_wrapper.py Mon Jun 06 09:37:06 2011 -0400 @@ -101,7 +101,7 @@ try: tmp = tempfile.NamedTemporaryFile().name tmp_stdout = open( tmp, 'wb' ) - proc = subprocess.Popen( args='cuffdiff 2>&1', shell=True, stdout=tmp_stdout ) + proc = subprocess.Popen( args='cuffdiff --no-update-check 2>&1', shell=True, stdout=tmp_stdout ) tmp_stdout.close() returncode = proc.wait() stdout = None @@ -135,7 +135,7 @@ # Build command. # Base; always use quiet mode to avoid problems with storing log output. - cmd = "cuffdiff -q" + cmd = "cuffdiff --no-update-check -q" # Add options. if options.inner_dist_std_dev: Repository URL: https://bitbucket.org/galaxy/galaxy-central/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.