Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 8acd07a50faf1b0f215d435e389a626237c22ca4 https://github.com/galaxyproject/galaxy/commit/8acd07a50faf1b0f215d435e389a6... Author: Nicola Soranzo nicola.soranzo@earlham.ac.uk Date: 2019-02-06 (Wed, 06 Feb 2019)
Changed paths: R doc/source/slideshow/architecture/galaxy_architecture.md R doc/source/slideshow/architecture/images/backbone-model-view.svg R doc/source/slideshow/architecture/images/cluster_support.svg R doc/source/slideshow/architecture/images/data_managers.svg R doc/source/slideshow/architecture/images/docker-chart.png R doc/source/slideshow/architecture/images/family/team.png R doc/source/slideshow/architecture/images/galaxy_schema.png R doc/source/slideshow/architecture/images/hda.svg R doc/source/slideshow/architecture/images/hda_dataset.plantuml.svg R doc/source/slideshow/architecture/images/hda_dataset.plantuml.txt R doc/source/slideshow/architecture/images/hda_hdca.plantuml.svg R doc/source/slideshow/architecture/images/hda_hdca.plantuml.txt R doc/source/slideshow/architecture/images/jsload.png R doc/source/slideshow/architecture/images/libraries.svg R doc/source/slideshow/architecture/images/library_permissions.svg R doc/source/slideshow/architecture/images/objectstore.plantuml.svg R doc/source/slideshow/architecture/images/objectstore.plantuml.txt R doc/source/slideshow/architecture/images/objectstore_diagram.svg R doc/source/slideshow/architecture/images/plantuml_options.txt R doc/source/slideshow/architecture/images/sequence.json R doc/source/slideshow/architecture/images/server_client.plantuml.svg R doc/source/slideshow/architecture/images/server_client.plantuml.txt R doc/source/slideshow/architecture/images/server_client_old.plantuml.svg R doc/source/slideshow/architecture/images/server_client_old.plantuml.txt R doc/source/slideshow/architecture/images/sqla_arch_small.png R doc/source/slideshow/architecture/images/usegalaxy_webservers.svg R doc/source/slideshow/architecture/images/usegalaxyorg.svg R doc/source/slideshow/architecture/images/webapp.plantuml.svg R doc/source/slideshow/architecture/images/webapp.plantuml.txt R doc/source/slideshow/architecture/images/what-is-webpack.svg R doc/source/slideshow/architecture/images/workflow_definition.svg R doc/source/slideshow/architecture/images/workflow_run.svg R doc/source/slideshow/architecture/images/wsgi_app.svg R doc/source/slideshow/architecture/images/wsgi_request.svg R doc/source/slideshow/architecture/remark-latest.min.js R doc/source/slideshow/architecture/style.css
Log Message: ----------- Remove architecture slides
Now available at
https://galaxyproject.github.io/training-material/topics/dev/tutorials/archi...
Commit: e725f8423a68c5fb802cdbe27c17d30f01272c3c https://github.com/galaxyproject/galaxy/commit/e725f8423a68c5fb802cdbe27c17d... Author: Nicola Soranzo nicola.soranzo@earlham.ac.uk Date: 2019-02-06 (Wed, 06 Feb 2019)
Changed paths: M doc/source/admin/apache.md M doc/source/admin/cluster.md M doc/source/admin/config.rst M doc/source/admin/jobs.md M doc/source/admin/nginx.md M doc/source/admin/production.md M doc/source/admin/scaling.md M doc/source/conf.py M doc/source/releases/16.10.rst M doc/source/releases/17.09_announce.rst M lib/galaxy/tools/xsd/galaxy.xsd
Log Message: ----------- Disable auto toctree for Markdown docs. Doc syntax fixes
recommonmark allows now to use the `.md` extension for cross referencing other documents, which also works on GitHub.
Commit: e97634739dcb84985a14cedf4f483890c3c4d31c https://github.com/galaxyproject/galaxy/commit/e97634739dcb84985a14cedf4f483... Author: Nicola Soranzo nicola.soranzo@earlham.ac.uk Date: 2019-02-06 (Wed, 06 Feb 2019)
Changed paths: M .gitignore M Makefile M doc/Makefile R doc/fix_schema_rst.sh M doc/parse_gx_xsd.py M doc/source/conf.py M lib/galaxy/dependencies/pipfiles/default/Pipfile M lib/galaxy/dependencies/pipfiles/default/pinned-dev-requirements.txt
Log Message: ----------- Build tool XML schema docs using ``sphinx_markdown_tables``
instead of converting the Markdown to reStructuredText with pandoc.
Fix the broken tables, but code inside tables is not coloured as in the rest of the document.
Commit: 0df943f5e3d0229d5d355e842b15cf6cdc662914 https://github.com/galaxyproject/galaxy/commit/0df943f5e3d0229d5d355e842b15c... Author: John Chilton jmchilton@gmail.com Date: 2019-02-07 (Thu, 07 Feb 2019)
Changed paths: M .gitignore M Makefile M doc/Makefile R doc/fix_schema_rst.sh M doc/parse_gx_xsd.py M doc/source/admin/apache.md M doc/source/admin/cluster.md M doc/source/admin/config.rst M doc/source/admin/jobs.md M doc/source/admin/nginx.md M doc/source/admin/production.md M doc/source/admin/scaling.md M doc/source/conf.py M doc/source/releases/16.10.rst M doc/source/releases/17.09_announce.rst R doc/source/slideshow/architecture/galaxy_architecture.md R doc/source/slideshow/architecture/images/backbone-model-view.svg R doc/source/slideshow/architecture/images/cluster_support.svg R doc/source/slideshow/architecture/images/data_managers.svg R doc/source/slideshow/architecture/images/docker-chart.png R doc/source/slideshow/architecture/images/family/team.png R doc/source/slideshow/architecture/images/galaxy_schema.png R doc/source/slideshow/architecture/images/hda.svg R doc/source/slideshow/architecture/images/hda_dataset.plantuml.svg R doc/source/slideshow/architecture/images/hda_dataset.plantuml.txt R doc/source/slideshow/architecture/images/hda_hdca.plantuml.svg R doc/source/slideshow/architecture/images/hda_hdca.plantuml.txt R doc/source/slideshow/architecture/images/jsload.png R doc/source/slideshow/architecture/images/libraries.svg R doc/source/slideshow/architecture/images/library_permissions.svg R doc/source/slideshow/architecture/images/objectstore.plantuml.svg R doc/source/slideshow/architecture/images/objectstore.plantuml.txt R doc/source/slideshow/architecture/images/objectstore_diagram.svg R doc/source/slideshow/architecture/images/plantuml_options.txt R doc/source/slideshow/architecture/images/sequence.json R doc/source/slideshow/architecture/images/server_client.plantuml.svg R doc/source/slideshow/architecture/images/server_client.plantuml.txt R doc/source/slideshow/architecture/images/server_client_old.plantuml.svg R doc/source/slideshow/architecture/images/server_client_old.plantuml.txt R doc/source/slideshow/architecture/images/sqla_arch_small.png R doc/source/slideshow/architecture/images/usegalaxy_webservers.svg R doc/source/slideshow/architecture/images/usegalaxyorg.svg R doc/source/slideshow/architecture/images/webapp.plantuml.svg R doc/source/slideshow/architecture/images/webapp.plantuml.txt R doc/source/slideshow/architecture/images/what-is-webpack.svg R doc/source/slideshow/architecture/images/workflow_definition.svg R doc/source/slideshow/architecture/images/workflow_run.svg R doc/source/slideshow/architecture/images/wsgi_app.svg R doc/source/slideshow/architecture/images/wsgi_request.svg R doc/source/slideshow/architecture/remark-latest.min.js R doc/source/slideshow/architecture/style.css M lib/galaxy/dependencies/pipfiles/default/Pipfile M lib/galaxy/dependencies/pipfiles/default/pinned-dev-requirements.txt M lib/galaxy/tools/xsd/galaxy.xsd
Log Message: ----------- Merge pull request #7313 from nsoranzo/doc_fixes
Build tool XML schema docs using ``sphinx_markdown_tables``
Compare: https://github.com/galaxyproject/galaxy/compare/da4dbbac3f1c...0df943f5e3d0