[galaxy-commits] commit/galaxy-central: dan: When getting job parameters for extracting a workflow from a history set ignore_errors to True. Prevents traceback when e.g. a tool was updated and had a text value changed to an integer.

7 Nov 2012

1 new commit in galaxy-central:


https://bitbucket.org/galaxy/galaxy-central/changeset/6ff28399645a/
changeset:   6ff28399645a
user:        dan
date:        2012-11-07 15:30:46
summary:     When getting job parameters for extracting a workflow from a history set ignore_errors to True. Prevents traceback when e.g. a tool was updated and had a text value changed to an integer.
affected #:  1 file

diff -r af1d4e5a8b6325ea311513ffe9d671fe2b87764e -r 6ff28399645ae158a03cec4b32c15a78da9b8018 lib/galaxy/webapps/galaxy/controllers/workflow.py

--- a/lib/galaxy/webapps/galaxy/controllers/workflow.py
+++ b/lib/galaxy/webapps/galaxy/controllers/workflow.py
@@ -1260,7 +1260,7 @@
                 assert job_id in jobs_by_id, "Attempt to create workflow with job not connected to current history"
                 job = jobs_by_id[ job_id ]
                 tool = trans.app.toolbox.get_tool( job.tool_id )
-                param_values = job.get_param_values( trans.app )
+                param_values = job.get_param_values( trans.app, ignore_errors=True ) #If a tool was updated and e.g. had a text value changed to an integer, we don't want a traceback here
                 associations = cleanup_param_values( tool.inputs, param_values )
                 step = model.WorkflowStep()
                 step.type = 'tool'

Repository URL: https://bitbucket.org/galaxy/galaxy-central/

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[galaxy-commits] commit/galaxy-central: dan: When getting job parameters for extracting a workflow from a history set ignore_errors to True. Prevents traceback when e.g. a tool was updated and had a text value changed to an integer.

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