1 new commit in galaxy-central: https://bitbucket.org/galaxy/galaxy-central/changeset/791d67a5f3f3/ changeset: 791d67a5f3f3 user: dan date: 2012-07-10 23:20:55 summary: Remove FreeBayes from tool_conf.xml.sample/main since it has been migrated to the toolshed. affected #: 2 files diff -r 3e6ab1cf0c2eebbc886a7911e970f43bbfde522b -r 791d67a5f3f3c5f3c0bc51c9fe8df040a0407990 tool_conf.xml.main --- a/tool_conf.xml.main +++ b/tool_conf.xml.main @@ -314,9 +314,6 @@ <tool file="gatk/variant_eval.xml" /><tool file="gatk/variant_combine.xml" /></section> - <section name="NGS: Variant Detection" id="variant_detection"> - <tool file="variant_detection/freebayes.xml" /> - </section><section name="NGS: Indel Analysis" id="indel_analysis"><tool file="indels/sam_indel_filter.xml" /><tool file="indels/indel_sam2interval.xml" /> diff -r 3e6ab1cf0c2eebbc886a7911e970f43bbfde522b -r 791d67a5f3f3c5f3c0bc51c9fe8df040a0407990 tool_conf.xml.sample --- a/tool_conf.xml.sample +++ b/tool_conf.xml.sample @@ -419,9 +419,6 @@ <tool file="gatk/variant_eval.xml" /><tool file="gatk/variant_combine.xml" /></section> - <section name="NGS: Variant Detection" id="variant_detection"> - <tool file="variant_detection/freebayes.xml" /> - </section><section name="NGS: Peak Calling" id="peak_calling"><tool file="peak_calling/macs_wrapper.xml" /><tool file="peak_calling/sicer_wrapper.xml" /> Repository URL: https://bitbucket.org/galaxy/galaxy-central/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.