Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 60a1b45704c4794e6fcac2e9ab6001484a801ca6 https://github.com/galaxyproject/galaxy/commit/60a1b45704c4794e6fcac2e9ab600... Author: Martin Cech <cech.marten@gmail.com> Date: 2015-10-08 (Thu, 08 Oct 2015) Changed paths: M client/galaxy/scripts/mvc/library/library-model.js M static/maps/mvc/library/library-model.js.map M static/scripts/mvc/library/library-model.js Log Message: ----------- make lib search case insensitive Commit: 2d4bd2e6f5c64162ab2c1de6d6b1e338bafb4b16 https://github.com/galaxyproject/galaxy/commit/2d4bd2e6f5c64162ab2c1de6d6b1e... Author: Martin Cech <cech.marten@gmail.com> Date: 2015-10-08 (Thu, 08 Oct 2015) Changed paths: M client/galaxy/scripts/mvc/library/library-librarytoolbar-view.js M client/galaxy/style/less/library.less M static/maps/mvc/library/library-librarytoolbar-view.js.map M static/scripts/mvc/library/library-librarytoolbar-view.js M static/style/blue/base.css M static/style/blue/library.css Log Message: ----------- fix the ordering and margins of lib toolbar items Commit: 39f5b7adf1cb835eed7b450806b249200c2a9cbe https://github.com/galaxyproject/galaxy/commit/39f5b7adf1cb835eed7b450806b24... Author: Martin Cech <cech.marten@gmail.com> Date: 2015-10-08 (Thu, 08 Oct 2015) Changed paths: M client/galaxy/scripts/mvc/library/library-librarylist-view.js M client/galaxy/scripts/mvc/library/library-librarytoolbar-view.js M static/maps/mvc/library/library-librarylist-view.js.map M static/maps/mvc/library/library-librarytoolbar-view.js.map M static/scripts/mvc/library/library-librarylist-view.js M static/scripts/mvc/library/library-librarytoolbar-view.js Log Message: ----------- show proper message when search has no results Commit: 775ee33d4dbf7cb763e9f25430aae645d2df4c65 https://github.com/galaxyproject/galaxy/commit/775ee33d4dbf7cb763e9f25430aae... Author: Martin Cech <cech.marten@gmail.com> Date: 2015-10-08 (Thu, 08 Oct 2015) Changed paths: M client/galaxy/scripts/mvc/library/library-librarylist-view.js M client/galaxy/scripts/mvc/library/library-librarytoolbar-view.js M static/maps/mvc/library/library-librarylist-view.js.map M static/maps/mvc/library/library-librarytoolbar-view.js.map M static/scripts/mvc/library/library-librarylist-view.js M static/scripts/mvc/library/library-librarytoolbar-view.js Log Message: ----------- fix options default order to fix bug with improper page being rendered also add missing comma for previous commit Commit: fe8dbd8183fe5706e041686ee57a683d1fd63c9e https://github.com/galaxyproject/galaxy/commit/fe8dbd8183fe5706e041686ee57a6... Author: Martin Cech <cech.marten@gmail.com> Date: 2015-10-08 (Thu, 08 Oct 2015) Changed paths: M client/galaxy/scripts/galaxy.library.js M client/galaxy/scripts/mvc/library/library-foldertoolbar-view.js M client/galaxy/scripts/mvc/library/library-librarylist-view.js M client/galaxy/scripts/mvc/library/library-librarytoolbar-view.js M static/maps/galaxy.library.js.map M static/maps/mvc/library/library-foldertoolbar-view.js.map M static/maps/mvc/library/library-librarylist-view.js.map M static/maps/mvc/library/library-librarytoolbar-view.js.map M static/scripts/galaxy.library.js M static/scripts/mvc/library/library-librarylist-view.js M static/scripts/mvc/library/library-librarytoolbar-view.js Log Message: ----------- fix problems with multiple bindings of view events; drop attempts at caching the libraries - need to study more for that Commit: 251f390f7c45f5d02af90f01f7b892b207950cb6 https://github.com/galaxyproject/galaxy/commit/251f390f7c45f5d02af90f01f7b89... Author: Martin Cech <cech.marten@gmail.com> Date: 2015-10-08 (Thu, 08 Oct 2015) Changed paths: M client/galaxy/scripts/mvc/library/library-foldertoolbar-view.js M static/maps/mvc/library/library-foldertoolbar-view.js.map M static/scripts/mvc/library/library-foldertoolbar-view.js Log Message: ----------- fix the ordering of folder controls to match library's also fix the active area of 'include deleted' checkbox Commit: 6c5f6e3f692c2b151afab39126a068f56971708d https://github.com/galaxyproject/galaxy/commit/6c5f6e3f692c2b151afab39126a06... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2015-10-12 (Mon, 12 Oct 2015) Changed paths: M client/galaxy/scripts/galaxy.library.js M client/galaxy/scripts/mvc/library/library-foldertoolbar-view.js M client/galaxy/scripts/mvc/library/library-librarylist-view.js M client/galaxy/scripts/mvc/library/library-librarytoolbar-view.js M client/galaxy/scripts/mvc/library/library-model.js M client/galaxy/style/less/library.less M static/maps/galaxy.library.js.map M static/maps/mvc/library/library-foldertoolbar-view.js.map M static/maps/mvc/library/library-librarylist-view.js.map M static/maps/mvc/library/library-librarytoolbar-view.js.map M static/maps/mvc/library/library-model.js.map M static/scripts/galaxy.library.js M static/scripts/mvc/library/library-foldertoolbar-view.js M static/scripts/mvc/library/library-librarylist-view.js M static/scripts/mvc/library/library-librarytoolbar-view.js M static/scripts/mvc/library/library-model.js M static/style/blue/base.css M static/style/blue/library.css Log Message: ----------- Merge pull request #878 from martenson/datalib-fixes-release [15.10] Release Fixes for Data Libraries Commit: b470843c89af119b9800d6fb68323338c7020fb6 https://github.com/galaxyproject/galaxy/commit/b470843c89af119b9800d6fb68323... Author: carlfeberhard <carlfeberhard@gmail.com> Date: 2015-10-13 (Tue, 13 Oct 2015) Changed paths: M client/galaxy/scripts/mvc/app/app-analysis.js M static/maps/mvc/app/app-analysis.js.map M static/scripts/mvc/app/app-analysis.js Log Message: ----------- UI, histories: fix multiview button to be logged-in users only Commit: 99fab6f342f6f50536b1a5544b8b07f769805497 https://github.com/galaxyproject/galaxy/commit/99fab6f342f6f50536b1a5544b8b0... Author: carlfeberhard <carlfeberhard@gmail.com> Date: 2015-10-13 (Tue, 13 Oct 2015) Changed paths: M client/galaxy/scripts/mvc/history/history-panel.js M client/galaxy/scripts/mvc/list/list-panel.js M static/maps/mvc/history/history-panel.js.map M static/maps/mvc/list/list-panel.js.map M static/scripts/mvc/history/history-panel.js M static/scripts/mvc/list/list-panel.js Log Message: ----------- UI, histories: on first history search, use current searchFor value at callback and not value when ajax began Commit: 34a11d1187127face6dd0c780051458b2b5d7430 https://github.com/galaxyproject/galaxy/commit/34a11d1187127face6dd0c7800514... Author: carlfeberhard <carlfeberhard@gmail.com> Date: 2015-10-13 (Tue, 13 Oct 2015) Changed paths: M client/galaxy/scripts/mvc/history/multi-panel.js M static/maps/mvc/history/multi-panel.js.map M static/scripts/mvc/history/multi-panel.js Log Message: ----------- UI, histories: fix default empty message for lazy loaded panels in multi-view Commit: 41069e8ba6dcd6328864eabb104e36a2a70e6140 https://github.com/galaxyproject/galaxy/commit/41069e8ba6dcd6328864eabb104e3... Author: carlfeberhard <carlfeberhard@gmail.com> Date: 2015-10-13 (Tue, 13 Oct 2015) Changed paths: M client/galaxy/scripts/mvc/history/multi-panel.js M static/maps/mvc/history/multi-panel.js.map M static/scripts/mvc/history/multi-panel.js Log Message: ----------- UI, histories: fix/reverse order for drag and drop dataset copy Commit: 03c7aae512d010a3100a547af3c194e6f8957e35 https://github.com/galaxyproject/galaxy/commit/03c7aae512d010a3100a547af3c19... Author: carlfeberhard <carlfeberhard@gmail.com> Date: 2015-10-13 (Tue, 13 Oct 2015) Changed paths: M client/galaxy/style/less/list-item.less M static/style/blue/base.css Log Message: ----------- UI, histories: disable user-select on dataset selectors to prevent text select/highlight when using shift to select a range Commit: ee42fd05319171a79791803d5c0adc168ef2cced https://github.com/galaxyproject/galaxy/commit/ee42fd05319171a79791803d5c0ad... Author: John Chilton <jmchilton@gmail.com> Date: 2015-10-14 (Wed, 14 Oct 2015) Changed paths: M client/galaxy/scripts/mvc/app/app-analysis.js M client/galaxy/scripts/mvc/history/history-panel.js M client/galaxy/scripts/mvc/history/multi-panel.js M client/galaxy/scripts/mvc/list/list-panel.js M client/galaxy/style/less/list-item.less M static/maps/mvc/app/app-analysis.js.map M static/maps/mvc/history/history-panel.js.map M static/maps/mvc/history/multi-panel.js.map M static/maps/mvc/list/list-panel.js.map M static/scripts/mvc/app/app-analysis.js M static/scripts/mvc/history/history-panel.js M static/scripts/mvc/history/multi-panel.js M static/scripts/mvc/list/list-panel.js M static/style/blue/base.css Log Message: ----------- Merge pull request #910 from carlfeberhard/release_15.10 [15.10] Some minor fixes to the history UI Commit: 120ec61264dadb90b0386e46bd4c33a2f6481c52 https://github.com/galaxyproject/galaxy/commit/120ec61264dadb90b0386e46bd4c3... Author: Daniel Blankenberg <dan.blankenberg@gmail.com> Date: 2015-10-14 (Wed, 14 Oct 2015) Changed paths: M tools/filters/cutWrapper.xml Log Message: ----------- Fix command quoting and remove size from text input for Cut tool. Commit: cf59e8bd3c52f52ae717ca9755e6b10f48382b07 https://github.com/galaxyproject/galaxy/commit/cf59e8bd3c52f52ae717ca9755e6b... Author: John Chilton <jmchilton@gmail.com> Date: 2015-10-14 (Wed, 14 Oct 2015) Changed paths: M tools/filters/cutWrapper.xml Log Message: ----------- Merge pull request #913 from blankenberg/cut_15.10 [15.10] Fix command quoting and remove size from text input for Cut tool. Commit: a742198a36d700f299019ef8929a9dc55d58c17a https://github.com/galaxyproject/galaxy/commit/a742198a36d700f299019ef8929a9... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2015-10-14 (Wed, 14 Oct 2015) Changed paths: M lib/galaxy/webapps/galaxy/controllers/history.py Log Message: ----------- Fixes for switching history (standard as well as multiview) when using IE11. Intentionally minimal fix for 15.10, more comprehensive refactoring+solution forthcoming for dev. Commit: 11d17b3e7b305a28aaa0fb8392424dbb650e70d6 https://github.com/galaxyproject/galaxy/commit/11d17b3e7b305a28aaa0fb8392424... Author: Nate Coraor <nate@bx.psu.edu> Date: 2015-10-15 (Thu, 15 Oct 2015) Changed paths: M lib/galaxy/webapps/galaxy/controllers/history.py Log Message: ----------- Merge pull request #920 from dannon/release_15.10 [15.10] IE11 history-stuck fix Commit: 15a8c594bd8041c17512a719eab6185c6b478f19 https://github.com/galaxyproject/galaxy/commit/15a8c594bd8041c17512a719eab61... Author: Martin Cech <cech.marten@gmail.com> Date: 2015-10-16 (Fri, 16 Oct 2015) Changed paths: M client/galaxy/scripts/mvc/library/library-librarylist-view.js M static/maps/mvc/library/library-librarylist-view.js.map M static/scripts/mvc/library/library-librarylist-view.js Log Message: ----------- fix the filter on deleted libraries to not show the public deleted libs by default Commit: 47ce939322111da71b914976170dd9ad41c0fe7d https://github.com/galaxyproject/galaxy/commit/47ce939322111da71b914976170dd... Author: Martin Cech <cech.marten@gmail.com> Date: 2015-10-16 (Fri, 16 Oct 2015) Changed paths: M client/galaxy/scripts/mvc/library/library-librarylist-view.js M static/maps/mvc/library/library-librarylist-view.js.map M static/scripts/mvc/library/library-librarylist-view.js Log Message: ----------- remove log Commit: b7dfeb4174183135f8ac7c858d6ce33ba69286c0 https://github.com/galaxyproject/galaxy/commit/b7dfeb4174183135f8ac7c858d6ce... Author: Daniel Blankenberg <dan.blankenberg@gmail.com> Date: 2015-10-19 (Mon, 19 Oct 2015) Changed paths: M client/galaxy/scripts/mvc/library/library-librarylist-view.js M static/maps/mvc/library/library-librarylist-view.js.map M static/scripts/mvc/library/library-librarylist-view.js Log Message: ----------- Merge pull request #934 from martenson/fix-showing-deleted-libs [15.10] fix the filter on search results to not show the public deleted libs Commit: dd2d6960db3cd14238a9b10595cc0f5840e8f92b https://github.com/galaxyproject/galaxy/commit/dd2d6960db3cd14238a9b10595cc0... Author: guerler <aysam.guerler@gmail.com> Date: 2015-10-20 (Tue, 20 Oct 2015) Changed paths: M client/galaxy/style/less/base.less M static/style/blue/base.css Log Message: ----------- Fixed missing trackster navigation pane (issue #946) Please enter the commit message for your changes. Lines starting Commit: 0f9067d2444575760f138e7fe9c4b6302b172ace https://github.com/galaxyproject/galaxy/commit/0f9067d2444575760f138e7fe9c4b... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2015-10-20 (Tue, 20 Oct 2015) Changed paths: M client/galaxy/style/less/base.less M static/style/blue/base.css Log Message: ----------- Merge pull request #957 from guerler/fix_trackster_001 [15.10] Fixed missing trackster navigation pane (issue #946) Commit: 732b4f5b1f45a6e676ff70590944f3b6dcf8a77f https://github.com/galaxyproject/galaxy/commit/732b4f5b1f45a6e676ff70590944f... Author: Martin Cech <cech.marten@gmail.com> Date: 2015-10-20 (Tue, 20 Oct 2015) Changed paths: M templates/webapps/galaxy/root/index.mako Log Message: ----------- fix missing analytics on the analysis page we abandoned base_panels for this page so the script was missing Commit: d53e13a4a997beec3cef5532ce39558296f54977 https://github.com/galaxyproject/galaxy/commit/d53e13a4a997beec3cef5532ce395... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2015-10-20 (Tue, 20 Oct 2015) Changed paths: M templates/webapps/galaxy/root/index.mako Log Message: ----------- Merge pull request #958 from martenson/fix-google-analytics [15.10] Fix google analytics on the analysis page Commit: 6f5aafe6279337b318149058e90b749e94838eaa https://github.com/galaxyproject/galaxy/commit/6f5aafe6279337b318149058e90b7... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2015-10-21 (Wed, 21 Oct 2015) Changed paths: M lib/galaxy/web/framework/webapp.py Log Message: ----------- For require_login=True, redirect directly to login without showing empty (and broken) looking panels, and potentially hitting an endless reload cycle. Commit: 92666cdf66914e98535567cd46946b745d02673e https://github.com/galaxyproject/galaxy/commit/92666cdf66914e98535567cd46946... Author: Eric Rasche <rasche.eric@gmail.com> Date: 2015-10-21 (Wed, 21 Oct 2015) Changed paths: M lib/galaxy/web/framework/webapp.py Log Message: ----------- Merge pull request #965 from dannon/login_req [15.10] Fix endless redirect cycle when login is required Commit: a5814e8f3bd66799f1941ed47ffc94498a56e471 https://github.com/galaxyproject/galaxy/commit/a5814e8f3bd66799f1941ed47ffc9... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2015-10-21 (Wed, 21 Oct 2015) Changed paths: M client/galaxy/scripts/galaxy.library.js M client/galaxy/scripts/mvc/app/app-analysis.js M client/galaxy/scripts/mvc/history/history-panel.js M client/galaxy/scripts/mvc/history/multi-panel.js M client/galaxy/scripts/mvc/library/library-foldertoolbar-view.js M client/galaxy/scripts/mvc/library/library-librarylist-view.js M client/galaxy/scripts/mvc/library/library-librarytoolbar-view.js M client/galaxy/scripts/mvc/library/library-model.js M client/galaxy/scripts/mvc/list/list-panel.js M client/galaxy/style/less/library.less M client/galaxy/style/less/list-item.less M lib/galaxy/web/framework/webapp.py M lib/galaxy/webapps/galaxy/controllers/history.py M static/maps/galaxy.library.js.map M static/maps/mvc/app/app-analysis.js.map M static/maps/mvc/history/history-panel.js.map M static/maps/mvc/history/multi-panel.js.map M static/maps/mvc/library/library-foldertoolbar-view.js.map M static/maps/mvc/library/library-librarylist-view.js.map M static/maps/mvc/library/library-librarytoolbar-view.js.map M static/maps/mvc/library/library-model.js.map M static/maps/mvc/list/list-panel.js.map M static/scripts/galaxy.library.js M static/scripts/mvc/app/app-analysis.js M static/scripts/mvc/history/history-panel.js M static/scripts/mvc/history/multi-panel.js M static/scripts/mvc/library/library-foldertoolbar-view.js M static/scripts/mvc/library/library-librarylist-view.js M static/scripts/mvc/library/library-librarytoolbar-view.js M static/scripts/mvc/library/library-model.js M static/scripts/mvc/list/list-panel.js M static/style/blue/base.css M static/style/blue/library.css M templates/webapps/galaxy/root/index.mako M tools/filters/cutWrapper.xml Log Message: ----------- Merge master-> dev. Resolved one conflict on style build. Compare: https://github.com/galaxyproject/galaxy/compare/0f0d14ae5130...a5814e8f3bd6