commit/galaxy-central: dan: Fix for fastq filter tool single-ended reads.
1 new commit in galaxy-central: https://bitbucket.org/galaxy/galaxy-central/changeset/cc064ff4249b/ changeset: cc064ff4249b user: dan date: 2012-09-13 21:41:18 summary: Fix for fastq filter tool single-ended reads. affected #: 1 file diff -r c4ced3262d0d50719dd5d7d24ed10627b75d67ba -r cc064ff4249b2701198a4121154f62182cd048ce tools/fastq/fastq_filter.xml --- a/tools/fastq/fastq_filter.xml +++ b/tools/fastq/fastq_filter.xml @@ -74,7 +74,7 @@ return False else: num_deviates -= 1 -#if $paired_end.value == 'single_end': +#if not $paired_end: qual_scores_split = [ qual_scores ] #else: qual_scores_split = [ qual_scores[ 0:int( len( qual_scores ) / 2 ) ], qual_scores[ int( len( qual_scores ) / 2 ): ] ] Repository URL: https://bitbucket.org/galaxy/galaxy-central/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.
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