Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 193c27e3dbc21ca539d9634b29618f86ab1c84b6 https://github.com/galaxyproject/galaxy/commit/193c27e3dbc21ca539d9634b29618... Author: guerler <aysam.guerler@gmail.com> Date: 2016-07-21 (Thu, 21 Jul 2016) Changed paths: M client/galaxy/scripts/mvc/tool/tool-form-composite.js M client/galaxy/scripts/mvc/ui/ui-buttons.js M static/maps/mvc/tool/tool-form-composite.js.map M static/maps/mvc/ui/ui-buttons.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/tool/tool-form-composite.js M static/scripts/mvc/ui/ui-buttons.js M test/qunit/tests/ui_tests.js Log Message: ----------- Move execute button and new history form to top of workflow execution form Commit: 7b49080dc1ea410842ffb16825f86c69a95e0989 https://github.com/galaxyproject/galaxy/commit/7b49080dc1ea410842ffb16825f86... Author: guerler <aysam.guerler@gmail.com> Date: 2016-07-21 (Thu, 21 Jul 2016) Changed paths: M client/galaxy/scripts/mvc/ui/ui-buttons.js M static/maps/mvc/ui/ui-buttons.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/ui/ui-buttons.js M test/qunit/tests/ui_tests.js Log Message: ----------- Adjust/fix button link variation, add test cases Commit: 842a98106257e21e9609370af7a55e31fdc99a6a https://github.com/galaxyproject/galaxy/commit/842a98106257e21e9609370af7a55... Author: guerler <aysam.guerler@gmail.com> Date: 2016-07-21 (Thu, 21 Jul 2016) Changed paths: M client/galaxy/scripts/mvc/ui/ui-buttons.js M static/maps/mvc/ui/ui-buttons.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/ui/ui-buttons.js M test/qunit/tests/ui_tests.js Log Message: ----------- Adjust check state button and add test cases Commit: 80d20900efb6c319a6373bd6adb63ba547cafd16 https://github.com/galaxyproject/galaxy/commit/80d20900efb6c319a6373bd6adb63... Author: guerler <aysam.guerler@gmail.com> Date: 2016-07-21 (Thu, 21 Jul 2016) Changed paths: M client/galaxy/scripts/mvc/ui/ui-buttons.js M client/galaxy/style/less/ui.less M static/maps/mvc/ui/ui-buttons.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/ui/ui-buttons.js M static/style/blue/base.css M test/qunit/tests/ui_tests.js Log Message: ----------- Adjust icon button, add test cases Commit: 9e82e59baff3ae23fe356aa6ad145324dcd30bf9 https://github.com/galaxyproject/galaxy/commit/9e82e59baff3ae23fe356aa6ad145... Author: guerler <aysam.guerler@gmail.com> Date: 2016-07-21 (Thu, 21 Jul 2016) Changed paths: M client/galaxy/scripts/mvc/ui/ui-buttons.js M client/galaxy/style/less/ui.less M static/maps/mvc/ui/ui-buttons.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/ui/ui-buttons.js M static/style/blue/base.css Log Message: ----------- Adjust menu button Commit: 361f89e8717738809fe2eecc08954809f271a049 https://github.com/galaxyproject/galaxy/commit/361f89e8717738809fe2eecc08954... Author: guerler <aysam.guerler@gmail.com> Date: 2016-07-21 (Thu, 21 Jul 2016) Changed paths: M client/galaxy/scripts/mvc/ui/ui-buttons.js M static/maps/mvc/ui/ui-buttons.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/ui/ui-buttons.js Log Message: ----------- Remove unused download attribute from button menu options Fix spacing Commit: 4781aafb472e7299e5a2204661584c4aeb52b98d https://github.com/galaxyproject/galaxy/commit/4781aafb472e7299e5a2204661584... Author: guerler <aysam.guerler@gmail.com> Date: 2016-07-21 (Thu, 21 Jul 2016) Changed paths: M client/galaxy/scripts/mvc/upload/default/default-view.js M client/galaxy/scripts/mvc/upload/upload-button.js M client/galaxy/scripts/mvc/upload/upload-view.js M static/maps/mvc/upload/default/default-view.js.map M static/maps/mvc/upload/upload-button.js.map M static/maps/mvc/upload/upload-view.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/upload/default/default-view.js M static/scripts/mvc/upload/upload-button.js M static/scripts/mvc/upload/upload-view.js Log Message: ----------- Adjust upload button, unify model and option attributes Commit: 31a8dbf670bed9666d5c4afeaf7c4fb2c55d70ce https://github.com/galaxyproject/galaxy/commit/31a8dbf670bed9666d5c4afeaf7c4... Author: guerler <aysam.guerler@gmail.com> Date: 2016-07-21 (Thu, 21 Jul 2016) Changed paths: M client/galaxy/scripts/mvc/ui/ui-buttons.js M client/galaxy/style/less/ui.less M static/maps/mvc/ui/ui-buttons.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/ui/ui-buttons.js M static/style/blue/base.css Log Message: ----------- Fix margin handling Commit: 072b28b091c66316d7eedb3482800f1aa2bc77e4 https://github.com/galaxyproject/galaxy/commit/072b28b091c66316d7eedb3482800... Author: guerler <aysam.guerler@gmail.com> Date: 2016-07-21 (Thu, 21 Jul 2016) Changed paths: M client/galaxy/scripts/mvc/tool/tool-form-composite.js M static/maps/mvc/tool/tool-form-composite.js.map M static/scripts/mvc/tool/tool-form-composite.js Log Message: ----------- Fix workflow wait label for workflow submission Commit: 01d14a0435d52666df69b21844e60a24b83fa25f https://github.com/galaxyproject/galaxy/commit/01d14a0435d52666df69b21844e60... Author: guerler <aysam.guerler@gmail.com> Date: 2016-07-21 (Thu, 21 Jul 2016) Changed paths: M client/galaxy/style/less/ui.less M static/style/blue/base.css Log Message: ----------- Reduce distance between icon and title Commit: 35ef492e21b6e6a70fe52b4d089f67c137909925 https://github.com/galaxyproject/galaxy/commit/35ef492e21b6e6a70fe52b4d089f6... Author: guerler <aysam.guerler@gmail.com> Date: 2016-07-21 (Thu, 21 Jul 2016) Changed paths: M client/galaxy/scripts/mvc/form/form-data.js M client/galaxy/scripts/mvc/form/form-parameters.js M client/galaxy/scripts/mvc/form/form-repeat.js M client/galaxy/scripts/mvc/form/form-section.js M client/galaxy/scripts/mvc/form/form-view.js M client/galaxy/scripts/mvc/ui/ui-misc.js M client/galaxy/scripts/mvc/ui/ui-select-default.js M client/galaxy/scripts/mvc/ui/ui-tabs.js M client/galaxy/style/less/ui.less M config/datatypes_conf.xml.sample M config/job_conf.xml.sample_advanced M config/plugins/visualizations/charts/static/app.css M config/plugins/visualizations/charts/static/app.js M config/plugins/visualizations/charts/static/charts/forms/default.js M config/plugins/visualizations/charts/static/charts/jqplot/common/config.js M config/plugins/visualizations/charts/static/charts/nvd3/common/config.js M config/plugins/visualizations/charts/static/charts/nvd3/common/wrapper.js M config/plugins/visualizations/charts/static/charts/nvd3/pie/config.js M config/plugins/visualizations/charts/static/library/datasets.js M config/plugins/visualizations/charts/static/library/jobs.js M config/plugins/visualizations/charts/static/library/storage.js R config/plugins/visualizations/charts/static/library/ui-table-form.js M config/plugins/visualizations/charts/static/models/chart.js M config/plugins/visualizations/charts/static/models/config.js R config/plugins/visualizations/charts/static/models/group.js R config/plugins/visualizations/charts/static/models/groups.js M config/plugins/visualizations/charts/static/plugins/nvd3/nv.d3.css M config/plugins/visualizations/charts/static/views/editor.js R config/plugins/visualizations/charts/static/views/group.js A config/plugins/visualizations/charts/static/views/groups.js M config/plugins/visualizations/charts/static/views/settings.js M config/plugins/visualizations/charts/static/views/types.js M config/plugins/visualizations/charts/static/views/viewer.js M config/plugins/visualizations/charts/static/views/viewport.js A config/tool_destinations.yml.sample A doc/source/admin/grt.rst M doc/source/admin/index.rst M doc/source/admin/interactive_environments.rst M doc/source/dev/index.rst A doc/source/dev/interactive_environments.rst M lib/galaxy/config.py M lib/galaxy/dependencies/pinned-requirements.txt A lib/galaxy/jobs/dynamic_tool_destination.py M lib/galaxy/jobs/mapper.py M lib/galaxy/tools/deps/conda_util.py M lib/galaxy/tools/deps/resolvers/conda.py M lib/galaxy/web/framework/base.py A scripts/grt.py A scripts/grt.yml.sample M static/maps/mvc/form/form-data.js.map M static/maps/mvc/form/form-parameters.js.map M static/maps/mvc/form/form-repeat.js.map M static/maps/mvc/form/form-section.js.map M static/maps/mvc/form/form-view.js.map M static/maps/mvc/ui/ui-misc.js.map M static/maps/mvc/ui/ui-select-default.js.map M static/maps/mvc/ui/ui-tabs.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/form/form-data.js M static/scripts/mvc/form/form-parameters.js M static/scripts/mvc/form/form-repeat.js M static/scripts/mvc/form/form-section.js M static/scripts/mvc/form/form-view.js M static/scripts/mvc/ui/ui-misc.js M static/scripts/mvc/ui/ui-select-default.js M static/scripts/mvc/ui/ui-tabs.js M static/style/blue/base.css A test/functional/tools/output_filter_exception_1.xml M test/functional/tools/samples_tool_conf.xml A test/unit/jobs/dynamic_tool_destination/__init__.py A test/unit/jobs/dynamic_tool_destination/data/dest_fail.yml A test/unit/jobs/dynamic_tool_destination/data/priority_tool_destination.yml A test/unit/jobs/dynamic_tool_destination/data/test.empty A test/unit/jobs/dynamic_tool_destination/data/test.fasta A test/unit/jobs/dynamic_tool_destination/data/test1.full A test/unit/jobs/dynamic_tool_destination/data/test3.full A test/unit/jobs/dynamic_tool_destination/data/test_no_verbose.yml A test/unit/jobs/dynamic_tool_destination/data/test_num_input_datasets.yml A test/unit/jobs/dynamic_tool_destination/data/test_users.yml A test/unit/jobs/dynamic_tool_destination/data/tool_destination.yml A test/unit/jobs/dynamic_tool_destination/mockGalaxy.py A test/unit/jobs/dynamic_tool_destination/test_dynamic_tool_destination.py A test/unit/jobs/dynamic_tool_destination/ymltests.py M test/unit/tools/test_conda_resolution.py Log Message: ----------- Merge branch 'dev' into move_workflow_run Commit: 45038d1399bf9e619ee815dad587f8ec3b3c4815 https://github.com/galaxyproject/galaxy/commit/45038d1399bf9e619ee815dad587f... Author: guerler <aysam.guerler@gmail.com> Date: 2016-07-22 (Fri, 22 Jul 2016) Changed paths: M client/galaxy/scripts/mvc/ui/ui-select-content.js M client/galaxy/scripts/mvc/ui/ui-select-default.js M config/tool_data_table_conf.xml.sample M lib/galaxy/tools/wrappers.py M lib/galaxy/webapps/galaxy/controllers/workflow.py M lib/galaxy/workflow/render.py M static/maps/mvc/ui/ui-select-content.js.map M static/maps/mvc/ui/ui-select-default.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/ui/ui-select-content.js M static/scripts/mvc/ui/ui-select-default.js M test/qunit/tests/ui_tests.js Log Message: ----------- Merge branch 'dev' into move_workflow_run Commit: 881af45dfedc8415f0a444e958be4c1c1eeeeb68 https://github.com/galaxyproject/galaxy/commit/881af45dfedc8415f0a444e958be4... Author: guerler <aysam.guerler@gmail.com> Date: 2016-07-22 (Fri, 22 Jul 2016) Changed paths: M test/qunit/tests/upload_dialog_tests.js Log Message: ----------- Fix upload dialog test cases Commit: 7763aaa39b882e6fd9076055266b271abbf69829 https://github.com/galaxyproject/galaxy/commit/7763aaa39b882e6fd9076055266b2... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2016-07-22 (Fri, 22 Jul 2016) Changed paths: M client/galaxy/scripts/mvc/tool/tool-form-composite.js M client/galaxy/scripts/mvc/ui/ui-buttons.js M client/galaxy/scripts/mvc/upload/default/default-view.js M client/galaxy/scripts/mvc/upload/upload-button.js M client/galaxy/scripts/mvc/upload/upload-view.js M client/galaxy/style/less/ui.less M static/maps/mvc/tool/tool-form-composite.js.map M static/maps/mvc/ui/ui-buttons.js.map M static/maps/mvc/upload/default/default-view.js.map M static/maps/mvc/upload/upload-button.js.map M static/maps/mvc/upload/upload-view.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/tool/tool-form-composite.js M static/scripts/mvc/ui/ui-buttons.js M static/scripts/mvc/upload/default/default-view.js M static/scripts/mvc/upload/upload-button.js M static/scripts/mvc/upload/upload-view.js M static/style/blue/base.css M test/qunit/tests/ui_tests.js M test/qunit/tests/upload_dialog_tests.js Log Message: ----------- Merge pull request #2643 from guerler/move_workflow_run Move workflow run and history options to top, add loading indicator Compare: https://github.com/galaxyproject/galaxy/compare/40fde4ecf6e4...7763aaa39b88