galaxy-dist commit bc690ccf2339: Have rerun action make use of tool.check_and_update_param_values(). Fixes Server Error issue when trying to rerun updated tools.
# HG changeset patch -- Bitbucket.org # Project galaxy-dist # URL http://bitbucket.org/galaxy/galaxy-dist/overview # User Daniel Blankenberg <dan@bx.psu.edu> # Date 1288897385 14400 # Node ID bc690ccf23396e1c7e29e8ee801996ac3e3d3409 # Parent 6838e10e5912cec46060bda189841edba305ac1d Have rerun action make use of tool.check_and_update_param_values(). Fixes Server Error issue when trying to rerun updated tools. --- a/lib/galaxy/web/controllers/tool_runner.py +++ b/lib/galaxy/web/controllers/tool_runner.py @@ -123,6 +123,7 @@ class ToolRunner( BaseController ): params_objects = job.get_param_values( trans.app ) except: raise Exception( "Failed to get paramemeters for dataset id %d " % data.id ) + upgrade_messages = tool.check_and_update_param_values( params_objects, trans ) # Need to remap dataset parameters. Job parameters point to original # dataset used; parameter should be the analygous dataset in the # current history. @@ -152,7 +153,7 @@ class ToolRunner( BaseController ): state.inputs = params_objects tool_state_string = util.object_to_string(state.encode(tool, trans.app)) # Setup context for template - vars = dict( tool_state=state, errors = {} ) + vars = dict( tool_state=state, errors = upgrade_messages ) # Is the "add frame" stuff neccesary here? add_frame = AddFrameData() add_frame.debug = trans.debug
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