Branch: refs/heads/release_18.01 Home: https://github.com/galaxyproject/galaxy Commit: 70ac429f22899684d80190e576b176dbef6be1d7 https://github.com/galaxyproject/galaxy/commit/70ac429f22899684d80190e576b17... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-01-23 (Tue, 23 Jan 2018) Changed paths: M client/galaxy/scripts/viz/trackster/tracks.js Log Message: ----------- Disentangle 'view' handling in trackster track initialization. This is a step towards making Trackster work again. Commit: 4112bd51cc59a0a16845fcfeba2b9b8cb3c3925b https://github.com/galaxyproject/galaxy/commit/4112bd51cc59a0a16845fcfeba2b9... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-01-23 (Tue, 23 Jan 2018) Changed paths: M client/galaxy/scripts/viz/trackster/tracks.js Log Message: ----------- Fix undefined incomplete_features reference, use correct 'this.view' for tiledtrack Commit: 975e41a0372c85d1caf86c5fde5492e2fa3c4ec9 https://github.com/galaxyproject/galaxy/commit/975e41a0372c85d1caf86c5fde549... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-01-23 (Tue, 23 Jan 2018) Changed paths: M client/galaxy/scripts/viz/visualization.js Log Message: ----------- Removal of self reference and unused import in visualization.js Commit: ac872cccf5465a3f3fce197870222168d5b1f550 https://github.com/galaxyproject/galaxy/commit/ac872cccf5465a3f3fce197870222... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-01-23 (Tue, 23 Jan 2018) Changed paths: M client/galaxy/scripts/viz/trackster/painters.js Log Message: ----------- Trackster painters overhaul, fixes. Commit: 9c54765e6fb6164816c16ed79628ad37f73a9192 https://github.com/galaxyproject/galaxy/commit/9c54765e6fb6164816c16ed79628a... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-01-23 (Tue, 23 Jan 2018) Changed paths: M client/galaxy/scripts/viz/trackster/slotting.js Log Message: ----------- Scope and minor cleanup in slotting.js Commit: 00f4ffe166716d91fefb6078881d3d79e014c2bb https://github.com/galaxyproject/galaxy/commit/00f4ffe166716d91fefb6078881d3... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-01-23 (Tue, 23 Jan 2018) Changed paths: M client/galaxy/scripts/viz/trackster/filters.js Log Message: ----------- Fix undefined var in trackster/filters -- still exists one that I need to fix here, but that'll take some digging. Commit: 2c51bdd5d04f267b5282ee06ed2312e1b3a44d25 https://github.com/galaxyproject/galaxy/commit/2c51bdd5d04f267b5282ee06ed231... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-01-23 (Tue, 23 Jan 2018) Changed paths: M client/galaxy/scripts/viz/trackster/tracks.js Log Message: ----------- Incremental fixes and work on trackster/tracks.js -- still not painting.... Commit: 4d7539dbeccc2a51bb36a21b8b34733e7345ae8a https://github.com/galaxyproject/galaxy/commit/4d7539dbeccc2a51bb36a21b8b347... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-01-23 (Tue, 23 Jan 2018) Changed paths: M client/galaxy/scripts/viz/trackster/tracks.js Log Message: ----------- More trackster/tracks work. More variable scoping issues fixed, function definitions standardized. One callback issue resolved. Commit: 4a7487400aa45a558a87982888c7ce75a234efa1 https://github.com/galaxyproject/galaxy/commit/4a7487400aa45a558a87982888c7c... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-01-23 (Tue, 23 Jan 2018) Changed paths: M client/galaxy/scripts/viz/trackster/painters.js M client/galaxy/scripts/viz/trackster/tracks.js Log Message: ----------- Minor regex fix, drop a debug statement. Commit: 80c7f369148919c93132c08e19e993b290cc4a84 https://github.com/galaxyproject/galaxy/commit/80c7f369148919c93132c08e19e99... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-01-23 (Tue, 23 Jan 2018) Changed paths: M client/galaxy/scripts/viz/trackster.js M client/galaxy/scripts/viz/visualization.js Log Message: ----------- Fix another regex; var scoping adjustments for trackster. Commit: 43d632d16c2edee3080baa5008269526fc671898 https://github.com/galaxyproject/galaxy/commit/43d632d16c2edee3080baa5008269... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-01-23 (Tue, 23 Jan 2018) Changed paths: M client/galaxy/scripts/viz/trackster/painters.js Log Message: ----------- Painter fixes, trying to track down initialization bug w/ this.prefs. Commit: 391ac34d5f1bc479b168b6187bd91bc1b21230fe https://github.com/galaxyproject/galaxy/commit/391ac34d5f1bc479b168b6187bd91... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-01-23 (Tue, 23 Jan 2018) Changed paths: M client/galaxy/scripts/viz/trackster/tracks.js Log Message: ----------- More cleanup in tracks.js, still trying to track down painter initialization bug. Commit: 5d180ba5191f6c427448f836f44c2b3ca15b5d82 https://github.com/galaxyproject/galaxy/commit/5d180ba5191f6c427448f836f44c2... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-01-23 (Tue, 23 Jan 2018) Changed paths: M client/galaxy/scripts/viz/trackster/painters.js M client/galaxy/scripts/viz/trackster/tracks.js Log Message: ----------- Rewrite painters using ES6 classes, for my sanity and future maintenance. Still won't paint, but it's easier to track through the hierarchy now. Commit: 33d17bcbe6b6a7dc85ed35849b7dce95ba04a8fe https://github.com/galaxyproject/galaxy/commit/33d17bcbe6b6a7dc85ed35849b7dc... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-01-23 (Tue, 23 Jan 2018) Changed paths: M client/galaxy/scripts/viz/trackster/painters.js Log Message: ----------- Slight reorg in painters, post-rewrite Commit: 3ac2cabce822ff71ba2fbbb23b1f71ec5428c1e2 https://github.com/galaxyproject/galaxy/commit/3ac2cabce822ff71ba2fbbb23b1f7... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-01-23 (Tue, 23 Jan 2018) Changed paths: M client/galaxy/scripts/viz/trackster.js Log Message: ----------- Spello Commit: 76c8dae70138e113774c43b54c68babfe26b0ed9 https://github.com/galaxyproject/galaxy/commit/76c8dae70138e113774c43b54c68b... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-01-23 (Tue, 23 Jan 2018) Changed paths: M client/galaxy/scripts/viz/trackster.js Log Message: ----------- TracksterUI class-ification, minor cleanup. Disentangling globals next. Commit: d7b2e4942fa2e940cce236d0b87c0b48e3c83508 https://github.com/galaxyproject/galaxy/commit/d7b2e4942fa2e940cce236d0b87c0... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-01-23 (Tue, 23 Jan 2018) Changed paths: M client/galaxy/scripts/viz/trackster.js Log Message: ----------- Global var refactoring, removal of some unused stuff. Commit: 9bd112bd9169f6fb782cc9fdd86cbb46824df49a https://github.com/galaxyproject/galaxy/commit/9bd112bd9169f6fb782cc9fdd86cb... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-01-23 (Tue, 23 Jan 2018) Changed paths: M client/galaxy/scripts/viz/trackster.js Log Message: ----------- Trackster refactoring; this pulls apart using a global view. There is a trackster ui, which holds the main view, and should be accessed through it when necessary. Commit: 0e6e468608fd85c3a8bdb41bf329523c821152b0 https://github.com/galaxyproject/galaxy/commit/0e6e468608fd85c3a8bdb41bf3295... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-02-27 (Tue, 27 Feb 2018) Changed paths: M client/galaxy/scripts/viz/trackster.js Log Message: ----------- Import fixes in main trackster.js Commit: 7c9c9775753d539527ff4d74a2108563fe06a945 https://github.com/galaxyproject/galaxy/commit/7c9c9775753d539527ff4d74a2108... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-02-28 (Wed, 28 Feb 2018) Changed paths: M client/galaxy/scripts/viz/trackster.js M client/galaxy/scripts/viz/trackster/tracks.js Log Message: ----------- Misc cleanup while trying to debug nonexistent paint vars. Commit: ec8c92604239bdb5b7e92717586bc305fbbf8db3 https://github.com/galaxyproject/galaxy/commit/ec8c92604239bdb5b7e92717586bc... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-03-05 (Mon, 05 Mar 2018) Changed paths: M client/galaxy/scripts/viz/trackster/painters.js Log Message: ----------- Refactoring in feature painter draw. Commit: f0df326e2cdb2c90fb78e0a18dbaadee3d62de17 https://github.com/galaxyproject/galaxy/commit/f0df326e2cdb2c90fb78e0a18dbaa... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-03-05 (Mon, 05 Mar 2018) Changed paths: M client/galaxy/scripts/viz/trackster/painters.js Log Message: ----------- Use static getters for default painter preferences, fix 'defailt' ironic typo. Commit: 4bca4a056cdf766eec8108db4aaa43ddbfb57c0e https://github.com/galaxyproject/galaxy/commit/4bca4a056cdf766eec8108db4aaa4... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-03-06 (Tue, 06 Mar 2018) Changed paths: M client/galaxy/scripts/utils/config.js M client/galaxy/scripts/viz/trackster/painters.js Log Message: ----------- Config.js fixes; it was trying to import itself and not use it. Commit: f33eee105f02d189cc68914dd72ed0a77f05cfcd https://github.com/galaxyproject/galaxy/commit/f33eee105f02d189cc68914dd72ed... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-03-06 (Tue, 06 Mar 2018) Changed paths: M client/galaxy/scripts/viz/trackster/tracks.js Log Message: ----------- Fix config parameter default building in tracks.js; ideally this turns into classes when the multiple inheritance is fixed/refactored, and we can use simple static getter/setter methods. Commit: fa3ec5f60b9a4b6bed0ee771166c6e49c8fa02d0 https://github.com/galaxyproject/galaxy/commit/fa3ec5f60b9a4b6bed0ee771166c6... Author: John Chilton <jmchilton@gmail.com> Date: 2018-03-08 (Thu, 08 Mar 2018) Changed paths: M client/galaxy/scripts/utils/config.js M client/galaxy/scripts/viz/trackster.js M client/galaxy/scripts/viz/trackster/filters.js M client/galaxy/scripts/viz/trackster/painters.js M client/galaxy/scripts/viz/trackster/slotting.js M client/galaxy/scripts/viz/trackster/tracks.js M client/galaxy/scripts/viz/visualization.js Log Message: ----------- Merge pull request #5261 from dannon/trackster_fixes [18.01] Trackster fixes. Compare: https://github.com/galaxyproject/galaxy/compare/1761d85e7299...fa3ec5f60b9a