galaxy-dist commit ddf70ed04c8b: sff_extractor tool
# HG changeset patch -- Bitbucket.org # Project galaxy-dist # URL http://bitbucket.org/galaxy/galaxy-dist/overview # User rc # Date 1285855763 14400 # Node ID ddf70ed04c8b24f9095d4b16f6041907f7c6d428 # Parent 546dc4845175c92c91e181af61b6e1d2a108230e sff_extractor tool output is now explicitly set to fastqsanger when the fastq option is selected. patch by peter@maubp.freeserve.co.uk --- a/tools/filters/sff_extractor.xml +++ b/tools/filters/sff_extractor.xml @@ -14,7 +14,7 @@ <param name="fastq_output" type="boolean" truevalue="fastq_true" falsevalue="fastq_false" checked="False" label="Do you want FASTQ file instead of FASTA + FASTA quality file?" /></inputs><outputs> - <data format="fastq" name="out_file1" > + <data format="fastqsanger" name="out_file1" ><filter>fastq_output is True</filter></data><data format="xml" name="out_file2">
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