1 new changeset in galaxy-central:

http://bitbucket.org/galaxy/galaxy-central/changeset/5774231adb8d/ changeset: r5253:5774231adb8d user: natefoo date: 2011-03-23 15:59:26 summary: Set the ftype of SRMA test outputs so the BAMs are compared as SAMs affected #: 1 file (24 bytes)

--- a/tools/sr_mapping/srma_wrapper.xml Wed Mar 23 09:57:06 2011 -0400 +++ b/tools/sr_mapping/srma_wrapper.xml Wed Mar 23 10:59:26 2011 -0400 @@ -91,7 +91,7 @@ <param name="ref" value="hg18chr21" /><param name="input" value="srma_in1.bam" type="bam" /><param name="source_select" value="pre_set" /> - <output name="output" file="srma_out1.bam"/> + <output name="output" file="srma_out1.bam" ftype="bam"/></test><test><!-- Commands to run to prepare test files (uses custom genome): @@ -118,7 +118,7 @@ <param name="correctBases" value="true" /><param name="useSequenceQualities" value="true" /><param name="maxHeapSize" value="8192" /> - <output name="output" file="srma_out2.bam"/> + <output name="output" file="srma_out2.bam" ftype="bam"/></test></tests><help>

Repository URL: https://bitbucket.org/galaxy/galaxy-central/

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