# HG changeset patch --
Bitbucket.org
# Project galaxy-dist
# URL
http://bitbucket.org/galaxy/galaxy-dist/overview
# User jeremy goecks <jeremy.goecks(a)emory.edu>
# Date 1277480436 14400
# Node ID 4dd860651b7e46b24f9942e06bfacdbf6ab3b28e
# Parent df5010a5df581674896beec9b35ca50bf477f380
GTF enhancements: add GTF as a default datatype for Galaxy, set column metadata, and add
GTF sniffer.
--- a/lib/galaxy/datatypes/interval.py
+++ b/lib/galaxy/datatypes/interval.py
@@ -854,9 +854,83 @@ class Gff3( Gff ):
class Gtf( Gff ):
"""Tab delimited data in Gtf format"""
file_ext = "gtf"
+ column_names = [ 'Seqname', 'Source', 'Feature',
'Start', 'End', 'Score', 'Strand', 'Frame',
'Attributes' ]
+
+ """Add metadata elements"""
+ MetadataElement( name="columns", default=9, desc="Number of
columns", readonly=True, visible=False )
+ MetadataElement( name="column_types",
default=['str','str','str','int','int','float','str','int','list'],
param=metadata.ColumnTypesParameter, desc="Column types", readonly=True,
visible=False )
+
def sniff( self, filename ):
- return False
+ """
+ Determines whether the file is in gtf format
+
+ GTF lines have nine required fields that must be tab-separated. The first eight
GTF fields are the same as GFF.
+ The group field has been expanded into a list of attributes. Each attribute
consists of a type/value pair.
+ Attributes must end in a semi-colon, and be separated from any following
attribute by exactly one space.
+ The attribute list must begin with the two mandatory attributes:
+
+ gene_id value - A globally unique identifier for the genomic source of the
sequence.
+ transcript_id value - A globally unique identifier for the predicted
transcript.
+
+ For complete details see
http://genome.ucsc.edu/FAQ/FAQformat#format4
+
+ >>> fname = get_test_fname( '1.bed' )
+ >>> Gtf().sniff( fname )
+ False
+ >>> fname = get_test_fname( 'test.gff' )
+ >>> Gtf().sniff( fname )
+ False
+ >>> fname = get_test_fname( 'test.gtf' )
+ >>> Gtf().sniff( fname )
+ True
+ """
+ headers = get_headers( filename, '\t' )
+ try:
+ if len(headers) < 2:
+ return False
+ for hdr in headers:
+ if hdr and hdr[0].startswith( '##gff-version' ) and hdr[0].find(
'2' ) < 0:
+ return False
+ if hdr and hdr[0] and not hdr[0].startswith( '#' ):
+ if len(hdr) != 9:
+ return False
+ try:
+ int( hdr[3] )
+ int( hdr[4] )
+ except:
+ return False
+ if hdr[5] != '.':
+ try:
+ score = float( hdr[5] )
+ except:
+ return False
+ if hdr[6] not in data.valid_strand:
+ return False
+
+ # Check attributes for gene_id, transcript_id
+ attributes = hdr[8].split(";")
+ if len( attributes ) >= 2:
+ try:
+ # Imprecise: should check for a single space per the spec.
+ attr_name, attr_value = attributes[0].split(" ")
+ if attr_name != 'gene_id':
+ return False
+ except:
+ return False
+ try:
+ # Imprecise: should check for a single space per the spec.
+ attr_name, attr_value = attributes[1][1:].split("
")
+ if attr_name != 'transcript_id':
+ return False
+ except:
+ return False
+ else:
+ return False
+ return True
+ except:
+ return False
+
class Wiggle( Tabular, _RemoteCallMixin ):
"""Tab delimited data in wiggle format"""
--- a/lib/galaxy/datatypes/sniff.py
+++ b/lib/galaxy/datatypes/sniff.py
@@ -238,6 +238,9 @@ def guess_ext( fname, sniff_order=None,
>> fname = get_test_fname('file.html')
>> guess_ext(fname)
'html'
+ >>> fname = get_test_fname('test.gtf')
+ >>> guess_ext(fname)
+ 'gtf'
>> fname = get_test_fname('test.gff')
>> guess_ext(fname)
'gff'
--- /dev/null
+++ b/lib/galaxy/datatypes/test/test.gtf
@@ -0,0 +1,500 @@
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transcript_id "CUFF.50189.1"; FPKM "6.3668918357"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "17.963819"; cov
"0.406914";
+chr13 Cufflinks exon 3405463 3405542 1000 . . gene_id "CUFF.50189";
transcript_id "CUFF.50189.1"; exon_number "1"; FPKM
"6.3668918357"; frac "1.000000"; conf_lo "0.000000"; conf_hi
"17.963819"; cov "0.406914";
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transcript_id "CUFF.50191.1"; FPKM "11.7350749444"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "35.205225"; cov
"0.750000";
+chr13 Cufflinks exon 3473337 3473372 1000 . . gene_id "CUFF.50191";
transcript_id "CUFF.50191.1"; exon_number "1"; FPKM
"11.7350749444"; frac "1.000000"; conf_lo "0.000000";
conf_hi "35.205225"; cov "0.750000";
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transcript_id "CUFF.50193.1"; FPKM "39.6058779373"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "85.338807"; cov
"2.531250";
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transcript_id "CUFF.50193.1"; exon_number "1"; FPKM
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conf_hi "85.338807"; cov "2.531250";
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transcript_id "CUFF.50195.1"; FPKM "29.8710998584"; frac
"1.000000"; conf_lo "7.290671"; conf_hi "52.451529"; cov
"1.909091";
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transcript_id "CUFF.50195.1"; exon_number "1"; FPKM
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conf_hi "52.451529"; cov "1.909091";
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transcript_id "CUFF.50195.1"; exon_number "2"; FPKM
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conf_hi "52.451529"; cov "1.909091";
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conf_hi "46.940300"; cov "1.000000";
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"7.498813";
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conf_hi "203.026260"; cov "7.498813";
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conf_hi "66.605898"; cov "1.975610";
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conf_hi "27.983385"; cov "0.944056";
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"3.724138";
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transcript_id "CUFF.50259.1"; exon_number "1"; FPKM
"58.2707169652"; frac "1.000000"; conf_lo "0.000000";
conf_hi "116.541434"; cov "3.724138";
+chr13 Cufflinks transcript 4594319 4594938 1000 - . gene_id "CUFF.50261";
transcript_id "CUFF.50261.1"; FPKM "29.3887094260"; frac
"1.000000"; conf_lo "8.607754"; conf_hi "50.169665"; cov
"1.878261";
+chr13 Cufflinks exon 4594319 4594400 1000 - . gene_id "CUFF.50261";
transcript_id "CUFF.50261.1"; exon_number "1"; FPKM
"29.3887094260"; frac "1.000000"; conf_lo "8.607754";
conf_hi "50.169665"; cov "1.878261";
+chr13 Cufflinks exon 4594906 4594938 1000 - . gene_id "CUFF.50261";
transcript_id "CUFF.50261.1"; exon_number "2"; FPKM
"29.3887094260"; frac "1.000000"; conf_lo "8.607754";
conf_hi "50.169665"; cov "1.878261";
+chr13 Cufflinks transcript 4596799 4598059 1000 - . gene_id "CUFF.50263";
transcript_id "CUFF.50263.1"; FPKM "22.8358215134"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "45.671643"; cov
"1.459459";
+chr13 Cufflinks exon 4596799 4596828 1000 - . gene_id "CUFF.50263";
transcript_id "CUFF.50263.1"; exon_number "1"; FPKM
"22.8358215134"; frac "1.000000"; conf_lo "0.000000";
conf_hi "45.671643"; cov "1.459459";
+chr13 Cufflinks exon 4598016 4598059 1000 - . gene_id "CUFF.50263";
transcript_id "CUFF.50263.1"; exon_number "2"; FPKM
"22.8358215134"; frac "1.000000"; conf_lo "0.000000";
conf_hi "45.671643"; cov "1.459459";
+chr13 Cufflinks transcript 4601790 4601816 1000 . . gene_id "CUFF.50265";
transcript_id "CUFF.50265.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 4601790 4601816 1000 . . gene_id "CUFF.50265";
transcript_id "CUFF.50265.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 4601884 4601952 1000 . . gene_id "CUFF.50267";
transcript_id "CUFF.50267.1"; FPKM "12.2452955941"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "29.562759"; cov
"0.782609";
+chr13 Cufflinks exon 4601884 4601952 1000 . . gene_id "CUFF.50267";
transcript_id "CUFF.50267.1"; exon_number "1"; FPKM
"12.2452955941"; frac "1.000000"; conf_lo "0.000000";
conf_hi "29.562759"; cov "0.782609";
+chr13 Cufflinks transcript 3541632 3541797 1000 . . gene_id "CUFF.50269";
transcript_id "CUFF.50269.1"; FPKM "10.1798240481"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "20.359648"; cov
"0.650602";
+chr13 Cufflinks exon 3541632 3541797 1000 . . gene_id "CUFF.50269";
transcript_id "CUFF.50269.1"; exon_number "1"; FPKM
"10.1798240481"; frac "1.000000"; conf_lo "0.000000";
conf_hi "20.359648"; cov "0.650602";
+chr13 Cufflinks transcript 3541917 3542016 1000 . . gene_id "CUFF.50271";
transcript_id "CUFF.50271.1"; FPKM "12.6738809399"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "27.308418"; cov
"0.810000";
+chr13 Cufflinks exon 3541917 3542016 1000 . . gene_id "CUFF.50271";
transcript_id "CUFF.50271.1"; exon_number "1"; FPKM
"12.6738809399"; frac "1.000000"; conf_lo "0.000000";
conf_hi "27.308418"; cov "0.810000";
+chr13 Cufflinks transcript 3542096 3542122 1000 . . gene_id "CUFF.50273";
transcript_id "CUFF.50273.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 3542096 3542122 1000 . . gene_id "CUFF.50273";
transcript_id "CUFF.50273.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 3548183 3548209 1000 . . gene_id "CUFF.50275";
transcript_id "CUFF.50275.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 3548183 3548209 1000 . . gene_id "CUFF.50275";
transcript_id "CUFF.50275.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 3559238 3559264 1000 . . gene_id "CUFF.50277";
transcript_id "CUFF.50277.1"; FPKM "15.6467665925"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "46.940300"; cov
"1.000000";
+chr13 Cufflinks exon 3559238 3559264 1000 . . gene_id "CUFF.50277";
transcript_id "CUFF.50277.1"; exon_number "1"; FPKM
"15.6467665925"; frac "1.000000"; conf_lo "0.000000";
conf_hi "46.940300"; cov "1.000000";
+chr13 Cufflinks transcript 3559265 3559291 1000 . . gene_id "CUFF.50279";
transcript_id "CUFF.50279.1"; FPKM "15.6467665925"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "46.940300"; cov
"1.000000";
+chr13 Cufflinks exon 3559265 3559291 1000 . . gene_id "CUFF.50279";
transcript_id "CUFF.50279.1"; exon_number "1"; FPKM
"15.6467665925"; frac "1.000000"; conf_lo "0.000000";
conf_hi "46.940300"; cov "1.000000";
+chr13 Cufflinks transcript 3561489 3561515 1000 . . gene_id "CUFF.50281";
transcript_id "CUFF.50281.1"; FPKM "15.6467665925"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "46.940300"; cov
"1.000000";
+chr13 Cufflinks exon 3561489 3561515 1000 . . gene_id "CUFF.50281";
transcript_id "CUFF.50281.1"; exon_number "1"; FPKM
"15.6467665925"; frac "1.000000"; conf_lo "0.000000";
conf_hi "46.940300"; cov "1.000000";
+chr13 Cufflinks transcript 3561516 3561616 1000 . . gene_id "CUFF.50283";
transcript_id "CUFF.50283.1"; FPKM "12.5483969702"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "27.038038"; cov
"0.801980";
+chr13 Cufflinks exon 3561516 3561616 1000 . . gene_id "CUFF.50283";
transcript_id "CUFF.50283.1"; exon_number "1"; FPKM
"12.5483969702"; frac "1.000000"; conf_lo "0.000000";
conf_hi "27.038038"; cov "0.801980";
+chr13 Cufflinks transcript 3563788 3563913 1000 . . gene_id "CUFF.50285";
transcript_id "CUFF.50285.1"; FPKM "16.7564314774"; frac
"1.000000"; conf_lo "1.765464"; conf_hi "31.747399"; cov
"1.070920";
+chr13 Cufflinks exon 3563788 3563913 1000 . . gene_id "CUFF.50285";
transcript_id "CUFF.50285.1"; exon_number "1"; FPKM
"16.7564314774"; frac "1.000000"; conf_lo "1.765464";
conf_hi "31.747399"; cov "1.070920";
+chr13 Cufflinks transcript 3564114 3564162 1000 . . gene_id "CUFF.50287";
transcript_id "CUFF.50287.1"; FPKM "68.9735017140"; frac
"1.000000"; conf_lo "20.201871"; conf_hi "117.745132"; cov
"4.408163";
+chr13 Cufflinks exon 3564114 3564162 1000 . . gene_id "CUFF.50287";
transcript_id "CUFF.50287.1"; exon_number "1"; FPKM
"68.9735017140"; frac "1.000000"; conf_lo "20.201871";
conf_hi "117.745132"; cov "4.408163";
+chr13 Cufflinks transcript 5861035 5872268 1000 - . gene_id "CUFF.50289";
transcript_id "CUFF.50289.1"; FPKM "7.5439767500"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "18.212771"; cov
"0.482143";
+chr13 Cufflinks exon 5861035 5861117 1000 - . gene_id "CUFF.50289";
transcript_id "CUFF.50289.1"; exon_number "1"; FPKM
"7.5439767500"; frac "1.000000"; conf_lo "0.000000"; conf_hi
"18.212771"; cov "0.482143";
+chr13 Cufflinks exon 5872240 5872268 1000 - . gene_id "CUFF.50289";
transcript_id "CUFF.50289.1"; exon_number "2"; FPKM
"7.5439767500"; frac "1.000000"; conf_lo "0.000000"; conf_hi
"18.212771"; cov "0.482143";
+chr13 Cufflinks transcript 5864061 5864135 1000 . . gene_id "CUFF.50291";
transcript_id "CUFF.50291.1"; FPKM "16.8985079199"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "36.411224"; cov
"1.080000";
+chr13 Cufflinks exon 5864061 5864135 1000 . . gene_id "CUFF.50291";
transcript_id "CUFF.50291.1"; exon_number "1"; FPKM
"16.8985079199"; frac "1.000000"; conf_lo "0.000000";
conf_hi "36.411224"; cov "1.080000";
+chr13 Cufflinks transcript 5864192 5864585 1000 . . gene_id "CUFF.50293";
transcript_id "CUFF.50293.1"; FPKM "18.2280859542"; frac
"1.000000"; conf_lo "9.386166"; conf_hi "27.070006"; cov
"1.164975";
+chr13 Cufflinks exon 5864192 5864585 1000 . . gene_id "CUFF.50293";
transcript_id "CUFF.50293.1"; exon_number "1"; FPKM
"18.2280859542"; frac "1.000000"; conf_lo "9.386166";
conf_hi "27.070006"; cov "1.164975";
+chr13 Cufflinks transcript 5865070 5865096 1000 . . gene_id "CUFF.50295";
transcript_id "CUFF.50295.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 5865070 5865096 1000 . . gene_id "CUFF.50295";
transcript_id "CUFF.50295.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 5865442 5866941 1000 + . gene_id "CUFF.50297";
transcript_id "CUFF.50297.1"; FPKM "13.2019593124"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "28.446269"; cov
"0.843750";
+chr13 Cufflinks exon 5865442 5865510 1000 + . gene_id "CUFF.50297";
transcript_id "CUFF.50297.1"; exon_number "1"; FPKM
"13.2019593124"; frac "1.000000"; conf_lo "0.000000";
conf_hi "28.446269"; cov "0.843750";
+chr13 Cufflinks exon 5866915 5866941 1000 + . gene_id "CUFF.50297";
transcript_id "CUFF.50297.1"; exon_number "2"; FPKM
"13.2019593124"; frac "1.000000"; conf_lo "0.000000";
conf_hi "28.446269"; cov "0.843750";
+chr13 Cufflinks transcript 5866598 5866661 1000 . . gene_id "CUFF.50299";
transcript_id "CUFF.50299.1"; FPKM "92.4137151871"; frac
"1.000000"; conf_lo "43.016507"; conf_hi "141.810924"; cov
"5.906250";
+chr13 Cufflinks exon 5866598 5866661 1000 . . gene_id "CUFF.50299";
transcript_id "CUFF.50299.1"; exon_number "1"; FPKM
"92.4137151871"; frac "1.000000"; conf_lo "43.016507";
conf_hi "141.810924"; cov "5.906250";
+chr13 Cufflinks transcript 5866756 5866871 1000 . . gene_id "CUFF.50301";
transcript_id "CUFF.50301.1"; FPKM "83.7641556375"; frac
"1.000000"; conf_lo "48.832088"; conf_hi "118.696223"; cov
"5.353448";
+chr13 Cufflinks exon 5866756 5866871 1000 . . gene_id "CUFF.50301";
transcript_id "CUFF.50301.1"; exon_number "1"; FPKM
"83.7641556375"; frac "1.000000"; conf_lo "48.832088";
conf_hi "118.696223"; cov "5.353448";
+chr13 Cufflinks transcript 5866964 5867014 1000 . . gene_id "CUFF.50303";
transcript_id "CUFF.50303.1"; FPKM "124.2537347053"; frac
"1.000000"; conf_lo "60.089382"; conf_hi "188.418087"; cov
"7.941176";
+chr13 Cufflinks exon 5866964 5867014 1000 . . gene_id "CUFF.50303";
transcript_id "CUFF.50303.1"; exon_number "1"; FPKM
"124.2537347053"; frac "1.000000"; conf_lo "60.089382";
conf_hi "188.418087"; cov "7.941176";
+chr13 Cufflinks transcript 5867386 5867412 1000 . . gene_id "CUFF.50305";
transcript_id "CUFF.50305.1"; FPKM "15.6467665925"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "46.940300"; cov
"1.000000";
+chr13 Cufflinks exon 5867386 5867412 1000 . . gene_id "CUFF.50305";
transcript_id "CUFF.50305.1"; exon_number "1"; FPKM
"15.6467665925"; frac "1.000000"; conf_lo "0.000000";
conf_hi "46.940300"; cov "1.000000";
+chr13 Cufflinks transcript 5867480 5867506 1000 . . gene_id "CUFF.50307";
transcript_id "CUFF.50307.1"; FPKM "15.6467665925"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "46.940300"; cov
"1.000000";
+chr13 Cufflinks exon 5867480 5867506 1000 . . gene_id "CUFF.50307";
transcript_id "CUFF.50307.1"; exon_number "1"; FPKM
"15.6467665925"; frac "1.000000"; conf_lo "0.000000";
conf_hi "46.940300"; cov "1.000000";
+chr13 Cufflinks transcript 5867688 5867737 1000 . . gene_id "CUFF.50309";
transcript_id "CUFF.50309.1"; FPKM "25.3477618799"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "54.616836"; cov
"1.620000";
+chr13 Cufflinks exon 5867688 5867737 1000 . . gene_id "CUFF.50309";
transcript_id "CUFF.50309.1"; exon_number "1"; FPKM
"25.3477618799"; frac "1.000000"; conf_lo "0.000000";
conf_hi "54.616836"; cov "1.620000";
+chr13 Cufflinks transcript 5867820 5868008 1000 . . gene_id "CUFF.50311";
transcript_id "CUFF.50311.1"; FPKM "15.6467665925"; frac
"1.000000"; conf_lo "3.818923"; conf_hi "27.474610"; cov
"1.000000";
+chr13 Cufflinks exon 5867820 5868008 1000 . . gene_id "CUFF.50311";
transcript_id "CUFF.50311.1"; exon_number "1"; FPKM
"15.6467665925"; frac "1.000000"; conf_lo "3.818923";
conf_hi "27.474610"; cov "1.000000";
+chr13 Cufflinks transcript 5868254 5868314 1000 . . gene_id "CUFF.50313";
transcript_id "CUFF.50313.1"; FPKM "13.8512359999"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "33.439842"; cov
"0.885246";
+chr13 Cufflinks exon 5868254 5868314 1000 . . gene_id "CUFF.50313";
transcript_id "CUFF.50313.1"; exon_number "1"; FPKM
"13.8512359999"; frac "1.000000"; conf_lo "0.000000";
conf_hi "33.439842"; cov "0.885246";
+chr13 Cufflinks transcript 5869125 5869300 1000 . . gene_id "CUFF.50315";
transcript_id "CUFF.50315.1"; FPKM "88.8131808291"; frac
"1.000000"; conf_lo "59.611587"; conf_hi "118.014775"; cov
"5.676136";
+chr13 Cufflinks exon 5869125 5869300 1000 . . gene_id "CUFF.50315";
transcript_id "CUFF.50315.1"; exon_number "1"; FPKM
"88.8131808291"; frac "1.000000"; conf_lo "59.611587";
conf_hi "118.014775"; cov "5.676136";
+chr13 Cufflinks transcript 5869455 5869484 1000 . . gene_id "CUFF.50317";
transcript_id "CUFF.50317.1"; FPKM "133.7631356353"; frac
"1.000000"; conf_lo "46.960728"; conf_hi "220.565544"; cov
"8.548931";
+chr13 Cufflinks exon 5869455 5869484 1000 . . gene_id "CUFF.50317";
transcript_id "CUFF.50317.1"; exon_number "1"; FPKM
"133.7631356353"; frac "1.000000"; conf_lo "46.960728";
conf_hi "220.565544"; cov "8.548931";
+chr13 Cufflinks transcript 5869555 5869581 1000 . . gene_id "CUFF.50319";
transcript_id "CUFF.50319.1"; FPKM "125.1741327402"; frac
"1.000000"; conf_lo "36.662655"; conf_hi "213.685611"; cov
"8.000000";
+chr13 Cufflinks exon 5869555 5869581 1000 . . gene_id "CUFF.50319";
transcript_id "CUFF.50319.1"; exon_number "1"; FPKM
"125.1741327402"; frac "1.000000"; conf_lo "36.662655";
conf_hi "213.685611"; cov "8.000000";
+chr13 Cufflinks transcript 6205097 6205155 1000 . . gene_id "CUFF.50321";
transcript_id "CUFF.50321.1"; FPKM "14.3207694237"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "34.573396"; cov
"0.915254";
+chr13 Cufflinks exon 6205097 6205155 1000 . . gene_id "CUFF.50321";
transcript_id "CUFF.50321.1"; exon_number "1"; FPKM
"14.3207694237"; frac "1.000000"; conf_lo "0.000000";
conf_hi "34.573396"; cov "0.915254";
+chr13 Cufflinks transcript 6227260 6227293 1000 . . gene_id "CUFF.50323";
transcript_id "CUFF.50323.1"; FPKM "18.6233083846"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "49.047086"; cov
"1.190234";
+chr13 Cufflinks exon 6227260 6227293 1000 . . gene_id "CUFF.50323";
transcript_id "CUFF.50323.1"; exon_number "1"; FPKM
"18.6233083846"; frac "1.000000"; conf_lo "0.000000";
conf_hi "49.047086"; cov "1.190234";
+chr13 Cufflinks transcript 6553021 6553051 1000 . . gene_id "CUFF.50325";
transcript_id "CUFF.50325.1"; FPKM "27.2556579354"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "65.800979"; cov
"1.741935";
+chr13 Cufflinks exon 6553021 6553051 1000 . . gene_id "CUFF.50325";
transcript_id "CUFF.50325.1"; exon_number "1"; FPKM
"27.2556579354"; frac "1.000000"; conf_lo "0.000000";
conf_hi "65.800979"; cov "1.741935";
+chr13 Cufflinks transcript 6576412 6576471 1000 . . gene_id "CUFF.50327";
transcript_id "CUFF.50327.1"; FPKM "14.0820899333"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "33.997173"; cov
"0.900000";
+chr13 Cufflinks exon 6576412 6576471 1000 . . gene_id "CUFF.50327";
transcript_id "CUFF.50327.1"; exon_number "1"; FPKM
"14.0820899333"; frac "1.000000"; conf_lo "0.000000";
conf_hi "33.997173"; cov "0.900000";
+chr13 Cufflinks transcript 6576625 6576734 1000 . . gene_id "CUFF.50329";
transcript_id "CUFF.50329.1"; FPKM "26.8839898726"; frac
"1.000000"; conf_lo "6.561604"; conf_hi "47.206376"; cov
"1.718182";
+chr13 Cufflinks exon 6576625 6576734 1000 . . gene_id "CUFF.50329";
transcript_id "CUFF.50329.1"; exon_number "1"; FPKM
"26.8839898726"; frac "1.000000"; conf_lo "6.561604";
conf_hi "47.206376"; cov "1.718182";
+chr13 Cufflinks transcript 6577727 6577820 1000 . . gene_id "CUFF.50331";
transcript_id "CUFF.50331.1"; FPKM "31.4599881488"; frac
"1.000000"; conf_lo "7.678472"; conf_hi "55.241504"; cov
"2.010638";
+chr13 Cufflinks exon 6577727 6577820 1000 . . gene_id "CUFF.50331";
transcript_id "CUFF.50331.1"; exon_number "1"; FPKM
"31.4599881488"; frac "1.000000"; conf_lo "7.678472";
conf_hi "55.241504"; cov "2.010638";
+chr13 Cufflinks transcript 6579706 6579858 1000 . . gene_id "CUFF.50333";
transcript_id "CUFF.50333.1"; FPKM "11.0447764182"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "22.089553"; cov
"0.705882";
+chr13 Cufflinks exon 6579706 6579858 1000 . . gene_id "CUFF.50333";
transcript_id "CUFF.50333.1"; exon_number "1"; FPKM
"11.0447764182"; frac "1.000000"; conf_lo "0.000000";
conf_hi "22.089553"; cov "0.705882";
+chr13 Cufflinks transcript 6580126 6580152 1000 . . gene_id "CUFF.50335";
transcript_id "CUFF.50335.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 6580126 6580152 1000 . . gene_id "CUFF.50335";
transcript_id "CUFF.50335.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 6580257 6580295 1000 . . gene_id "CUFF.50337";
transcript_id "CUFF.50337.1"; FPKM "21.6647537435"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "52.303342"; cov
"1.384615";
+chr13 Cufflinks exon 6580257 6580295 1000 . . gene_id "CUFF.50337";
transcript_id "CUFF.50337.1"; exon_number "1"; FPKM
"21.6647537435"; frac "1.000000"; conf_lo "0.000000";
conf_hi "52.303342"; cov "1.384615";
+chr13 Cufflinks transcript 6583845 6585843 1000 - . gene_id "CUFF.50339";
transcript_id "CUFF.50339.1"; FPKM "163.2242242265"; frac
"1.000000"; conf_lo "127.815919"; conf_hi "198.632530"; cov
"10.431818";
+chr13 Cufflinks exon 6583845 6583946 1000 - . gene_id "CUFF.50339";
transcript_id "CUFF.50339.1"; exon_number "1"; FPKM
"163.2242242265"; frac "1.000000"; conf_lo "127.815919";
conf_hi "198.632530"; cov "10.431818";
+chr13 Cufflinks exon 6585726 6585843 1000 - . gene_id "CUFF.50339";
transcript_id "CUFF.50339.1"; exon_number "2"; FPKM
"163.2242242265"; frac "1.000000"; conf_lo "127.815919";
conf_hi "198.632530"; cov "10.431818";
+chr13 Cufflinks transcript 6586295 6587966 1000 - . gene_id "CUFF.50341";
transcript_id "CUFF.50341.1"; FPKM "82.5011329424"; frac
"1.000000"; conf_lo "60.835274"; conf_hi "104.166992"; cov
"5.272727";
+chr13 Cufflinks exon 6586295 6586359 1000 - . gene_id "CUFF.50341";
transcript_id "CUFF.50341.1"; exon_number "1"; FPKM
"82.5011329424"; frac "1.000000"; conf_lo "60.835274";
conf_hi "104.166992"; cov "5.272727";
+chr13 Cufflinks exon 6587735 6587966 1000 - . gene_id "CUFF.50341";
transcript_id "CUFF.50341.1"; exon_number "2"; FPKM
"82.5011329424"; frac "1.000000"; conf_lo "60.835274";
conf_hi "104.166992"; cov "5.272727";
+chr13 Cufflinks transcript 6588113 6588703 1000 . . gene_id "CUFF.50343";
transcript_id "CUFF.50343.1"; FPKM "42.8896140100"; frac
"1.000000"; conf_lo "31.815563"; conf_hi "53.963665"; cov
"2.741117";
+chr13 Cufflinks exon 6588113 6588703 1000 . . gene_id "CUFF.50343";
transcript_id "CUFF.50343.1"; exon_number "1"; FPKM
"42.8896140100"; frac "1.000000"; conf_lo "31.815563";
conf_hi "53.963665"; cov "2.741117";
+chr13 Cufflinks transcript 6588763 6588911 1000 . . gene_id "CUFF.50345";
transcript_id "CUFF.50345.1"; FPKM "31.1885213287"; frac
"1.000000"; conf_lo "12.381135"; conf_hi "49.995907"; cov
"1.993289";
+chr13 Cufflinks exon 6588763 6588911 1000 . . gene_id "CUFF.50345";
transcript_id "CUFF.50345.1"; exon_number "1"; FPKM
"31.1885213287"; frac "1.000000"; conf_lo "12.381135";
conf_hi "49.995907"; cov "1.993289";
+chr13 Cufflinks transcript 6588964 6589091 1000 . . gene_id "CUFF.50347";
transcript_id "CUFF.50347.1"; FPKM "13.2019593124"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "26.403919"; cov
"0.843750";
+chr13 Cufflinks exon 6588964 6589091 1000 . . gene_id "CUFF.50347";
transcript_id "CUFF.50347.1"; exon_number "1"; FPKM
"13.2019593124"; frac "1.000000"; conf_lo "0.000000";
conf_hi "26.403919"; cov "0.843750";
+chr13 Cufflinks transcript 6589153 6589383 1000 . . gene_id "CUFF.50349";
transcript_id "CUFF.50349.1"; FPKM "12.8018999393"; frac
"1.000000"; conf_lo "3.124573"; conf_hi "22.479227"; cov
"0.818182";
+chr13 Cufflinks exon 6589153 6589383 1000 . . gene_id "CUFF.50349";
transcript_id "CUFF.50349.1"; exon_number "1"; FPKM
"12.8018999393"; frac "1.000000"; conf_lo "3.124573";
conf_hi "22.479227"; cov "0.818182";
+chr13 Cufflinks transcript 6589994 6590086 1000 . . gene_id "CUFF.50351";
transcript_id "CUFF.50351.1"; FPKM "9.0852193118"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "21.933660"; cov
"0.580645";
+chr13 Cufflinks exon 6589994 6590086 1000 . . gene_id "CUFF.50351";
transcript_id "CUFF.50351.1"; exon_number "1"; FPKM
"9.0852193118"; frac "1.000000"; conf_lo "0.000000"; conf_hi
"21.933660"; cov "0.580645";
+chr13 Cufflinks transcript 6590329 6590359 1000 . . gene_id "CUFF.50353";
transcript_id "CUFF.50353.1"; FPKM "27.2556579354"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "65.800979"; cov
"1.741935";
+chr13 Cufflinks exon 6590329 6590359 1000 . . gene_id "CUFF.50353";
transcript_id "CUFF.50353.1"; exon_number "1"; FPKM
"27.2556579354"; frac "1.000000"; conf_lo "0.000000";
conf_hi "65.800979"; cov "1.741935";
+chr13 Cufflinks transcript 6590592 6590645 1000 . . gene_id "CUFF.50355";
transcript_id "CUFF.50355.1"; FPKM "15.6467665925"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "37.774636"; cov
"1.000000";
+chr13 Cufflinks exon 6590592 6590645 1000 . . gene_id "CUFF.50355";
transcript_id "CUFF.50355.1"; exon_number "1"; FPKM
"15.6467665925"; frac "1.000000"; conf_lo "0.000000";
conf_hi "37.774636"; cov "1.000000";
+chr13 Cufflinks transcript 6590963 6591056 1000 . . gene_id "CUFF.50357";
transcript_id "CUFF.50357.1"; FPKM "17.9771360850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "35.954272"; cov
"1.148936";
+chr13 Cufflinks exon 6590963 6591056 1000 . . gene_id "CUFF.50357";
transcript_id "CUFF.50357.1"; exon_number "1"; FPKM
"17.9771360850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "35.954272"; cov "1.148936";
+chr13 Cufflinks transcript 6591182 6591208 1000 . . gene_id "CUFF.50359";
transcript_id "CUFF.50359.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 6591182 6591208 1000 . . gene_id "CUFF.50359";
transcript_id "CUFF.50359.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 6591662 6591724 1000 . . gene_id "CUFF.50361";
transcript_id "CUFF.50361.1"; FPKM "13.4115142222"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "32.378260"; cov
"0.857143";
+chr13 Cufflinks exon 6591662 6591724 1000 . . gene_id "CUFF.50361";
transcript_id "CUFF.50361.1"; exon_number "1"; FPKM
"13.4115142222"; frac "1.000000"; conf_lo "0.000000";
conf_hi "32.378260"; cov "0.857143";
+chr13 Cufflinks transcript 6592773 6592874 1000 . . gene_id "CUFF.50363";
transcript_id "CUFF.50363.1"; FPKM "12.4253734705"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "26.772959"; cov
"0.794118";
+chr13 Cufflinks exon 6592773 6592874 1000 . . gene_id "CUFF.50363";
transcript_id "CUFF.50363.1"; exon_number "1"; FPKM
"12.4253734705"; frac "1.000000"; conf_lo "0.000000";
conf_hi "26.772959"; cov "0.794118";
+chr13 Cufflinks transcript 6580385 6581757 1000 - . gene_id "CUFF.50365";
transcript_id "CUFF.50365.1"; FPKM "324.9135847836"; frac
"1.000000"; conf_lo "293.684884"; conf_hi "356.142286"; cov
"20.765542";
+chr13 Cufflinks exon 6580385 6580838 1000 - . gene_id "CUFF.50365";
transcript_id "CUFF.50365.1"; exon_number "1"; FPKM
"324.9135847836"; frac "1.000000"; conf_lo "293.684884";
conf_hi "356.142286"; cov "20.765542";
+chr13 Cufflinks exon 6581649 6581757 1000 - . gene_id "CUFF.50365";
transcript_id "CUFF.50365.1"; exon_number "2"; FPKM
"324.9135847836"; frac "1.000000"; conf_lo "293.684884";
conf_hi "356.142286"; cov "20.765542";
+chr13 Cufflinks transcript 6594213 6594242 1000 . . gene_id "CUFF.50367";
transcript_id "CUFF.50367.1"; FPKM "28.1641798665"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "67.994345"; cov
"1.800000";
+chr13 Cufflinks exon 6594213 6594242 1000 . . gene_id "CUFF.50367";
transcript_id "CUFF.50367.1"; exon_number "1"; FPKM
"28.1641798665"; frac "1.000000"; conf_lo "0.000000";
conf_hi "67.994345"; cov "1.800000";
+chr13 Cufflinks transcript 6594897 6594938 1000 . . gene_id "CUFF.50369";
transcript_id "CUFF.50369.1"; FPKM "20.1172713332"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "48.567389"; cov
"1.285714";
+chr13 Cufflinks exon 6594897 6594938 1000 . . gene_id "CUFF.50369";
transcript_id "CUFF.50369.1"; exon_number "1"; FPKM
"20.1172713332"; frac "1.000000"; conf_lo "0.000000";
conf_hi "48.567389"; cov "1.285714";
+chr13 Cufflinks transcript 6594742 6594836 1000 . . gene_id "CUFF.50371";
transcript_id "CUFF.50371.1"; FPKM "13.3409273052"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "28.745703"; cov
"0.852632";
+chr13 Cufflinks exon 6594742 6594836 1000 . . gene_id "CUFF.50371";
transcript_id "CUFF.50371.1"; exon_number "1"; FPKM
"13.3409273052"; frac "1.000000"; conf_lo "0.000000";
conf_hi "28.745703"; cov "0.852632";
+chr13 Cufflinks transcript 6595072 6595132 1000 . . gene_id "CUFF.50373";
transcript_id "CUFF.50373.1"; FPKM "20.7768539999"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "44.767898"; cov
"1.327869";
+chr13 Cufflinks exon 6595072 6595132 1000 . . gene_id "CUFF.50373";
transcript_id "CUFF.50373.1"; exon_number "1"; FPKM
"20.7768539999"; frac "1.000000"; conf_lo "0.000000";
conf_hi "44.767898"; cov "1.327869";
+chr13 Cufflinks transcript 6595199 6595225 1000 . . gene_id "CUFF.50375";
transcript_id "CUFF.50375.1"; FPKM "15.6467665925"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "46.940300"; cov
"1.000000";
+chr13 Cufflinks exon 6595199 6595225 1000 . . gene_id "CUFF.50375";
transcript_id "CUFF.50375.1"; exon_number "1"; FPKM
"15.6467665925"; frac "1.000000"; conf_lo "0.000000";
conf_hi "46.940300"; cov "1.000000";
+chr13 Cufflinks transcript 6595246 6595272 1000 . . gene_id "CUFF.50377";
transcript_id "CUFF.50377.1"; FPKM "15.6467665925"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "46.940300"; cov
"1.000000";
+chr13 Cufflinks exon 6595246 6595272 1000 . . gene_id "CUFF.50377";
transcript_id "CUFF.50377.1"; exon_number "1"; FPKM
"15.6467665925"; frac "1.000000"; conf_lo "0.000000";
conf_hi "46.940300"; cov "1.000000";
+chr13 Cufflinks transcript 6598001 6598027 1000 . . gene_id "CUFF.50379";
transcript_id "CUFF.50379.1"; FPKM "15.6467665925"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "46.940300"; cov
"1.000000";
+chr13 Cufflinks exon 6598001 6598027 1000 . . gene_id "CUFF.50379";
transcript_id "CUFF.50379.1"; exon_number "1"; FPKM
"15.6467665925"; frac "1.000000"; conf_lo "0.000000";
conf_hi "46.940300"; cov "1.000000";
+chr13 Cufflinks transcript 6601936 6601990 1000 . . gene_id "CUFF.50381";
transcript_id "CUFF.50381.1"; FPKM "15.3622799272"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "37.087825"; cov
"0.981818";
+chr13 Cufflinks exon 6601936 6601990 1000 . . gene_id "CUFF.50381";
transcript_id "CUFF.50381.1"; exon_number "1"; FPKM
"15.3622799272"; frac "1.000000"; conf_lo "0.000000";
conf_hi "37.087825"; cov "0.981818";
+chr13 Cufflinks transcript 6604226 6604297 1000 . . gene_id "CUFF.50383";
transcript_id "CUFF.50383.1"; FPKM "17.6026124166"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "37.928358"; cov
"1.125000";
+chr13 Cufflinks exon 6604226 6604297 1000 . . gene_id "CUFF.50383";
transcript_id "CUFF.50383.1"; exon_number "1"; FPKM
"17.6026124166"; frac "1.000000"; conf_lo "0.000000";
conf_hi "37.928358"; cov "1.125000";
+chr13 Cufflinks transcript 6616305 6616331 1000 . . gene_id "CUFF.50385";
transcript_id "CUFF.50385.1"; FPKM "46.9402997776"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "101.142289"; cov
"3.000000";
+chr13 Cufflinks exon 6616305 6616331 1000 . . gene_id "CUFF.50385";
transcript_id "CUFF.50385.1"; exon_number "1"; FPKM
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conf_hi "101.142289"; cov "3.000000";
+chr13 Cufflinks transcript 6616841 6616921 1000 . . gene_id "CUFF.50387";
transcript_id "CUFF.50387.1"; FPKM "5.2155888642"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "15.646767"; cov
"0.333333";
+chr13 Cufflinks exon 6616841 6616921 1000 . . gene_id "CUFF.50387";
transcript_id "CUFF.50387.1"; exon_number "1"; FPKM
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"15.646767"; cov "0.333333";
+chr13 Cufflinks transcript 6617878 6617990 1000 . . gene_id "CUFF.50389";
transcript_id "CUFF.50389.1"; FPKM "11.2158238407"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "24.166742"; cov
"0.716814";
+chr13 Cufflinks exon 6617878 6617990 1000 . . gene_id "CUFF.50389";
transcript_id "CUFF.50389.1"; exon_number "1"; FPKM
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conf_hi "24.166742"; cov "0.716814";
+chr13 Cufflinks transcript 6618127 6618156 1000 . . gene_id "CUFF.50391";
transcript_id "CUFF.50391.1"; FPKM "28.1641798665"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "67.994345"; cov
"1.800000";
+chr13 Cufflinks exon 6618127 6618156 1000 . . gene_id "CUFF.50391";
transcript_id "CUFF.50391.1"; exon_number "1"; FPKM
"28.1641798665"; frac "1.000000"; conf_lo "0.000000";
conf_hi "67.994345"; cov "1.800000";
+chr13 Cufflinks transcript 6618432 6618463 1000 . . gene_id "CUFF.50393";
transcript_id "CUFF.50393.1"; FPKM "26.4039186249"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "63.744698"; cov
"1.687500";
+chr13 Cufflinks exon 6618432 6618463 1000 . . gene_id "CUFF.50393";
transcript_id "CUFF.50393.1"; exon_number "1"; FPKM
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conf_hi "63.744698"; cov "1.687500";
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transcript_id "CUFF.50395.1"; FPKM "28.1641798665"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "60.685374"; cov
"1.800000";
+chr13 Cufflinks exon 6618765 6618809 1000 . . gene_id "CUFF.50395";
transcript_id "CUFF.50395.1"; exon_number "1"; FPKM
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conf_hi "60.685374"; cov "1.800000";
+chr13 Cufflinks transcript 6620226 6620259 1000 . . gene_id "CUFF.50397";
transcript_id "CUFF.50397.1"; FPKM "24.8507469411"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "59.995010"; cov
"1.588235";
+chr13 Cufflinks exon 6620226 6620259 1000 . . gene_id "CUFF.50397";
transcript_id "CUFF.50397.1"; exon_number "1"; FPKM
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conf_hi "59.995010"; cov "1.588235";
+chr13 Cufflinks transcript 6795860 6795886 1000 . . gene_id "CUFF.50399";
transcript_id "CUFF.50399.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 6795860 6795886 1000 . . gene_id "CUFF.50399";
transcript_id "CUFF.50399.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 7155940 7155966 1000 . . gene_id "CUFF.50401";
transcript_id "CUFF.50401.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 7155940 7155966 1000 . . gene_id "CUFF.50401";
transcript_id "CUFF.50401.1"; exon_number "1"; FPKM
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conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 7676033 7676123 1000 . . gene_id "CUFF.50403";
transcript_id "CUFF.50403.1"; FPKM "9.2848944615"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "22.415718"; cov
"0.593407";
+chr13 Cufflinks exon 7676033 7676123 1000 . . gene_id "CUFF.50403";
transcript_id "CUFF.50403.1"; exon_number "1"; FPKM
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"22.415718"; cov "0.593407";
+chr13 Cufflinks transcript 8202861 8202907 1000 . . gene_id "CUFF.50405";
transcript_id "CUFF.50405.1"; FPKM "17.9771360850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "43.400646"; cov
"1.148936";
+chr13 Cufflinks exon 8202861 8202907 1000 . . gene_id "CUFF.50405";
transcript_id "CUFF.50405.1"; exon_number "1"; FPKM
"17.9771360850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "43.400646"; cov "1.148936";
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transcript_id "CUFF.50407.1"; FPKM "19.2028499090"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "46.359781"; cov
"1.227273";
+chr13 Cufflinks exon 8210506 8210549 1000 . . gene_id "CUFF.50407";
transcript_id "CUFF.50407.1"; exon_number "1"; FPKM
"19.2028499090"; frac "1.000000"; conf_lo "0.000000";
conf_hi "46.359781"; cov "1.227273";
+chr13 Cufflinks transcript 8240024 8240081 1000 . . gene_id "CUFF.50409";
transcript_id "CUFF.50409.1"; FPKM "14.5676792413"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "35.169489"; cov
"0.931034";
+chr13 Cufflinks exon 8240024 8240081 1000 . . gene_id "CUFF.50409";
transcript_id "CUFF.50409.1"; exon_number "1"; FPKM
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conf_hi "35.169489"; cov "0.931034";
+chr13 Cufflinks transcript 8277443 8277522 1000 . . gene_id "CUFF.50411";
transcript_id "CUFF.50411.1"; FPKM "10.5615674500"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "25.497879"; cov
"0.675000";
+chr13 Cufflinks exon 8277443 8277522 1000 . . gene_id "CUFF.50411";
transcript_id "CUFF.50411.1"; exon_number "1"; FPKM
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conf_hi "25.497879"; cov "0.675000";
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transcript_id "CUFF.50413.1"; FPKM "24.8507469411"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "49.701494"; cov
"1.588235";
+chr13 Cufflinks exon 8277606 8277673 1000 . . gene_id "CUFF.50413";
transcript_id "CUFF.50413.1"; exon_number "1"; FPKM
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conf_hi "49.701494"; cov "1.588235";
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transcript_id "CUFF.50415.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 8277822 8277848 1000 . . gene_id "CUFF.50415";
transcript_id "CUFF.50415.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 8277918 8277977 1000 . . gene_id "CUFF.50417";
transcript_id "CUFF.50417.1"; FPKM "21.1231348999"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "45.514030"; cov
"1.350000";
+chr13 Cufflinks exon 8277918 8277977 1000 . . gene_id "CUFF.50417";
transcript_id "CUFF.50417.1"; exon_number "1"; FPKM
"21.1231348999"; frac "1.000000"; conf_lo "0.000000";
conf_hi "45.514030"; cov "1.350000";
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transcript_id "CUFF.50419.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 8278095 8278121 1000 . . gene_id "CUFF.50419";
transcript_id "CUFF.50419.1"; exon_number "1"; FPKM
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conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 8278201 8278350 1000 . . gene_id "CUFF.50421";
transcript_id "CUFF.50421.1"; FPKM "14.0820899333"; frac
"1.000000"; conf_lo "1.486686"; conf_hi "26.677494"; cov
"0.900000";
+chr13 Cufflinks exon 8278201 8278350 1000 . . gene_id "CUFF.50421";
transcript_id "CUFF.50421.1"; exon_number "1"; FPKM
"14.0820899333"; frac "1.000000"; conf_lo "1.486686";
conf_hi "26.677494"; cov "0.900000";
+chr13 Cufflinks transcript 8278906 8278932 1000 . . gene_id "CUFF.50423";
transcript_id "CUFF.50423.1"; FPKM "46.9402997776"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "101.142289"; cov
"3.000000";
+chr13 Cufflinks exon 8278906 8278932 1000 . . gene_id "CUFF.50423";
transcript_id "CUFF.50423.1"; exon_number "1"; FPKM
"46.9402997776"; frac "1.000000"; conf_lo "0.000000";
conf_hi "101.142289"; cov "3.000000";
+chr13 Cufflinks transcript 8281673 8281699 1000 . . gene_id "CUFF.50425";
transcript_id "CUFF.50425.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 8281673 8281699 1000 . . gene_id "CUFF.50425";
transcript_id "CUFF.50425.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 8311626 8311652 1000 . . gene_id "CUFF.50427";
transcript_id "CUFF.50427.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 8311626 8311652 1000 . . gene_id "CUFF.50427";
transcript_id "CUFF.50427.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 8321948 8321974 1000 . . gene_id "CUFF.50429";
transcript_id "CUFF.50429.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 8321948 8321974 1000 . . gene_id "CUFF.50429";
transcript_id "CUFF.50429.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 8330761 8330829 1000 . . gene_id "CUFF.50431";
transcript_id "CUFF.50431.1"; FPKM "12.2452955941"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "29.562759"; cov
"0.782609";
+chr13 Cufflinks exon 8330761 8330829 1000 . . gene_id "CUFF.50431";
transcript_id "CUFF.50431.1"; exon_number "1"; FPKM
"12.2452955941"; frac "1.000000"; conf_lo "0.000000";
conf_hi "29.562759"; cov "0.782609";
+chr13 Cufflinks transcript 8334495 8335002 1000 . . gene_id "CUFF.50433";
transcript_id "CUFF.50433.1"; FPKM "24.1169650432"; frac
"1.000000"; conf_lo "15.160149"; conf_hi "33.073781"; cov
"1.541339";
+chr13 Cufflinks exon 8334495 8335002 1000 . . gene_id "CUFF.50433";
transcript_id "CUFF.50433.1"; exon_number "1"; FPKM
"24.1169650432"; frac "1.000000"; conf_lo "15.160149";
conf_hi "33.073781"; cov "1.541339";
+chr13 Cufflinks transcript 8335517 8335639 1000 . . gene_id "CUFF.50435";
transcript_id "CUFF.50435.1"; FPKM "13.7386243251"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "27.477249"; cov
"0.878049";
+chr13 Cufflinks exon 8335517 8335639 1000 . . gene_id "CUFF.50435";
transcript_id "CUFF.50435.1"; exon_number "1"; FPKM
"13.7386243251"; frac "1.000000"; conf_lo "0.000000";
conf_hi "27.477249"; cov "0.878049";
+chr13 Cufflinks transcript 8390965 8390991 1000 . . gene_id "CUFF.50437";
transcript_id "CUFF.50437.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 8390965 8390991 1000 . . gene_id "CUFF.50437";
transcript_id "CUFF.50437.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 8431938 8432046 1000 . . gene_id "CUFF.50439";
transcript_id "CUFF.50439.1"; FPKM "15.5032182752"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "31.006437"; cov
"0.990826";
+chr13 Cufflinks exon 8431938 8432046 1000 . . gene_id "CUFF.50439";
transcript_id "CUFF.50439.1"; exon_number "1"; FPKM
"15.5032182752"; frac "1.000000"; conf_lo "0.000000";
conf_hi "31.006437"; cov "0.990826";
+chr13 Cufflinks transcript 8431688 8431754 1000 . . gene_id "CUFF.50441";
transcript_id "CUFF.50441.1"; FPKM "12.6108268059"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "30.445229"; cov
"0.805970";
+chr13 Cufflinks exon 8431688 8431754 1000 . . gene_id "CUFF.50441";
transcript_id "CUFF.50441.1"; exon_number "1"; FPKM
"12.6108268059"; frac "1.000000"; conf_lo "0.000000";
conf_hi "30.445229"; cov "0.805970";
+chr13 Cufflinks transcript 8432289 8432315 1000 . . gene_id "CUFF.50443";
transcript_id "CUFF.50443.1"; FPKM "15.6467665925"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "46.940300"; cov
"1.000000";
+chr13 Cufflinks exon 8432289 8432315 1000 . . gene_id "CUFF.50443";
transcript_id "CUFF.50443.1"; exon_number "1"; FPKM
"15.6467665925"; frac "1.000000"; conf_lo "0.000000";
conf_hi "46.940300"; cov "1.000000";
+chr13 Cufflinks transcript 8432115 8432188 1000 . . gene_id "CUFF.50445";
transcript_id "CUFF.50445.1"; FPKM "11.4179107567"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "27.565275"; cov
"0.729730";
+chr13 Cufflinks exon 8432115 8432188 1000 . . gene_id "CUFF.50445";
transcript_id "CUFF.50445.1"; exon_number "1"; FPKM
"11.4179107567"; frac "1.000000"; conf_lo "0.000000";
conf_hi "27.565275"; cov "0.729730";
+chr13 Cufflinks transcript 8463173 8463199 1000 . . gene_id "CUFF.50447";
transcript_id "CUFF.50447.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 8463173 8463199 1000 . . gene_id "CUFF.50447";
transcript_id "CUFF.50447.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 8482167 8482193 1000 . . gene_id "CUFF.50449";
transcript_id "CUFF.50449.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 8482167 8482193 1000 . . gene_id "CUFF.50449";
transcript_id "CUFF.50449.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 8518188 8518214 1000 . . gene_id "CUFF.50451";
transcript_id "CUFF.50451.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 8518188 8518214 1000 . . gene_id "CUFF.50451";
transcript_id "CUFF.50451.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 8619978 8620005 1000 . . gene_id "CUFF.50453";
transcript_id "CUFF.50453.1"; FPKM "30.1759069999"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "72.851084"; cov
"1.928571";
+chr13 Cufflinks exon 8619978 8620005 1000 . . gene_id "CUFF.50453";
transcript_id "CUFF.50453.1"; exon_number "1"; FPKM
"30.1759069999"; frac "1.000000"; conf_lo "0.000000";
conf_hi "72.851084"; cov "1.928571";
+chr13 Cufflinks transcript 8669464 8669490 1000 . . gene_id "CUFF.50455";
transcript_id "CUFF.50455.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 8669464 8669490 1000 . . gene_id "CUFF.50455";
transcript_id "CUFF.50455.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 8705396 8705459 1000 . . gene_id "CUFF.50457";
transcript_id "CUFF.50457.1"; FPKM "13.2019593124"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "31.872349"; cov
"0.843750";
+chr13 Cufflinks exon 8705396 8705459 1000 . . gene_id "CUFF.50457";
transcript_id "CUFF.50457.1"; exon_number "1"; FPKM
"13.2019593124"; frac "1.000000"; conf_lo "0.000000";
conf_hi "31.872349"; cov "0.843750";
+chr13 Cufflinks transcript 8719319 8719345 1000 . . gene_id "CUFF.50459";
transcript_id "CUFF.50459.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 8719319 8719345 1000 . . gene_id "CUFF.50459";
transcript_id "CUFF.50459.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 8766868 8767005 1000 . . gene_id "CUFF.50461";
transcript_id "CUFF.50461.1"; FPKM "12.2452955941"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "24.490591"; cov
"0.782609";
+chr13 Cufflinks exon 8766868 8767005 1000 . . gene_id "CUFF.50461";
transcript_id "CUFF.50461.1"; exon_number "1"; FPKM
"12.2452955941"; frac "1.000000"; conf_lo "0.000000";
conf_hi "24.490591"; cov "0.782609";
+chr13 Cufflinks transcript 8767194 8767393 1000 . . gene_id "CUFF.50463";
transcript_id "CUFF.50463.1"; FPKM "12.6738809399"; frac
"1.000000"; conf_lo "2.325700"; conf_hi "23.022061"; cov
"0.810000";
+chr13 Cufflinks exon 8767194 8767393 1000 . . gene_id "CUFF.50463";
transcript_id "CUFF.50463.1"; exon_number "1"; FPKM
"12.6738809399"; frac "1.000000"; conf_lo "2.325700";
conf_hi "23.022061"; cov "0.810000";
+chr13 Cufflinks transcript 8767461 8767531 1000 . . gene_id "CUFF.50465";
transcript_id "CUFF.50465.1"; FPKM "17.8505365351"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "38.462561"; cov
"1.140845";
+chr13 Cufflinks exon 8767461 8767531 1000 . . gene_id "CUFF.50465";
transcript_id "CUFF.50465.1"; exon_number "1"; FPKM
"17.8505365351"; frac "1.000000"; conf_lo "0.000000";
conf_hi "38.462561"; cov "1.140845";
+chr13 Cufflinks transcript 8767695 8767885 1000 . . gene_id "CUFF.50467";
transcript_id "CUFF.50467.1"; FPKM "17.6947726910"; frac
"1.000000"; conf_lo "5.182679"; conf_hi "30.206866"; cov
"1.130890";
+chr13 Cufflinks exon 8767695 8767885 1000 . . gene_id "CUFF.50467";
transcript_id "CUFF.50467.1"; exon_number "1"; FPKM
"17.6947726910"; frac "1.000000"; conf_lo "5.182679";
conf_hi "30.206866"; cov "1.130890";
+chr13 Cufflinks transcript 8767947 8767992 1000 . . gene_id "CUFF.50469";
transcript_id "CUFF.50469.1"; FPKM "27.5519150868"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "59.366126"; cov
"1.760870";
+chr13 Cufflinks exon 8767947 8767992 1000 . . gene_id "CUFF.50469";
transcript_id "CUFF.50469.1"; exon_number "1"; FPKM
"27.5519150868"; frac "1.000000"; conf_lo "0.000000";
conf_hi "59.366126"; cov "1.760870";
+chr13 Cufflinks transcript 8784118 8784193 1000 . . gene_id "CUFF.50471";
transcript_id "CUFF.50471.1"; FPKM "16.6761591315"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "35.932129"; cov
"1.065789";
+chr13 Cufflinks exon 8784118 8784193 1000 . . gene_id "CUFF.50471";
transcript_id "CUFF.50471.1"; exon_number "1"; FPKM
"16.6761591315"; frac "1.000000"; conf_lo "0.000000";
conf_hi "35.932129"; cov "1.065789";
+chr13 Cufflinks transcript 8802391 8802417 1000 . . gene_id "CUFF.50473";
transcript_id "CUFF.50473.1"; FPKM "109.5273661476"; frac
"1.000000"; conf_lo "26.732460"; conf_hi "192.322273"; cov
"7.000000";
+chr13 Cufflinks exon 8802391 8802417 1000 . . gene_id "CUFF.50473";
transcript_id "CUFF.50473.1"; exon_number "1"; FPKM
"109.5273661476"; frac "1.000000"; conf_lo "26.732460";
conf_hi "192.322273"; cov "7.000000";
+chr13 Cufflinks transcript 8802581 8802610 1000 . . gene_id "CUFF.50475";
transcript_id "CUFF.50475.1"; FPKM "154.9029892659"; frac
"1.000000"; conf_lo "61.492972"; conf_hi "248.313006"; cov
"9.900000";
+chr13 Cufflinks exon 8802581 8802610 1000 . . gene_id "CUFF.50475";
transcript_id "CUFF.50475.1"; exon_number "1"; FPKM
"154.9029892659"; frac "1.000000"; conf_lo "61.492972";
conf_hi "248.313006"; cov "9.900000";
+chr13 Cufflinks transcript 8803098 8803283 1000 . . gene_id "CUFF.50477";
transcript_id "CUFF.50477.1"; FPKM "18.1704386236"; frac
"1.000000"; conf_lo "5.321998"; conf_hi "31.018879"; cov
"1.161290";
+chr13 Cufflinks exon 8803098 8803283 1000 . . gene_id "CUFF.50477";
transcript_id "CUFF.50477.1"; exon_number "1"; FPKM
"18.1704386236"; frac "1.000000"; conf_lo "5.321998";
conf_hi "31.018879"; cov "1.161290";
+chr13 Cufflinks transcript 8803340 8803703 1000 . . gene_id "CUFF.50479";
transcript_id "CUFF.50479.1"; FPKM "12.7584623804"; frac
"1.000000"; conf_lo "5.062328"; conf_hi "20.454597"; cov
"0.815406";
+chr13 Cufflinks exon 8803340 8803703 1000 . . gene_id "CUFF.50479";
transcript_id "CUFF.50479.1"; exon_number "1"; FPKM
"12.7584623804"; frac "1.000000"; conf_lo "5.062328";
conf_hi "20.454597"; cov "0.815406";
+chr13 Cufflinks transcript 8803760 8819743 1000 + . gene_id "CUFF.50481";
transcript_id "CUFF.50481.1"; FPKM "15.1783005269"; frac
"1.000000"; conf_lo "2.785270"; conf_hi "27.571331"; cov
"0.970060";
+chr13 Cufflinks exon 8803760 8803879 1000 + . gene_id "CUFF.50481";
transcript_id "CUFF.50481.1"; exon_number "1"; FPKM
"15.1783005269"; frac "1.000000"; conf_lo "2.785270";
conf_hi "27.571331"; cov "0.970060";
+chr13 Cufflinks exon 8819697 8819743 1000 + . gene_id "CUFF.50481";
transcript_id "CUFF.50481.1"; exon_number "2"; FPKM
"15.1783005269"; frac "1.000000"; conf_lo "2.785270";
conf_hi "27.571331"; cov "0.970060";
+chr13 Cufflinks transcript 8819122 8819153 1000 . . gene_id "CUFF.50483";
transcript_id "CUFF.50483.1"; FPKM "26.4039186249"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "63.744698"; cov
"1.687500";
+chr13 Cufflinks exon 8819122 8819153 1000 . . gene_id "CUFF.50483";
transcript_id "CUFF.50483.1"; exon_number "1"; FPKM
"26.4039186249"; frac "1.000000"; conf_lo "0.000000";
conf_hi "63.744698"; cov "1.687500";
+chr13 Cufflinks transcript 8831114 8831142 1000 . . gene_id "CUFF.50485";
transcript_id "CUFF.50485.1"; FPKM "29.1353584826"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "70.338978"; cov
"1.862069";
+chr13 Cufflinks exon 8831114 8831142 1000 . . gene_id "CUFF.50485";
transcript_id "CUFF.50485.1"; exon_number "1"; FPKM
"29.1353584826"; frac "1.000000"; conf_lo "0.000000";
conf_hi "70.338978"; cov "1.862069";
+chr13 Cufflinks transcript 8831216 8831252 1000 . . gene_id "CUFF.50487";
transcript_id "CUFF.50487.1"; FPKM "34.2537322701"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "73.806535"; cov
"2.189189";
+chr13 Cufflinks exon 8831216 8831252 1000 . . gene_id "CUFF.50487";
transcript_id "CUFF.50487.1"; exon_number "1"; FPKM
"34.2537322701"; frac "1.000000"; conf_lo "0.000000";
conf_hi "73.806535"; cov "2.189189";
+chr13 Cufflinks transcript 8831404 8831522 1000 . . gene_id "CUFF.50489";
transcript_id "CUFF.50489.1"; FPKM "17.7505335293"; frac
"1.000000"; conf_lo "1.873974"; conf_hi "33.627093"; cov
"1.134454";
+chr13 Cufflinks exon 8831404 8831522 1000 . . gene_id "CUFF.50489";
transcript_id "CUFF.50489.1"; exon_number "1"; FPKM
"17.7505335293"; frac "1.000000"; conf_lo "1.873974";
conf_hi "33.627093"; cov "1.134454";
+chr13 Cufflinks transcript 8849862 8849935 1000 . . gene_id "CUFF.50491";
transcript_id "CUFF.50491.1"; FPKM "17.1268661351"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "36.903268"; cov
"1.094595";
+chr13 Cufflinks exon 8849862 8849935 1000 . . gene_id "CUFF.50491";
transcript_id "CUFF.50491.1"; exon_number "1"; FPKM
"17.1268661351"; frac "1.000000"; conf_lo "0.000000";
conf_hi "36.903268"; cov "1.094595";
+chr13 Cufflinks transcript 8850038 8850347 1000 . . gene_id "CUFF.50493";
transcript_id "CUFF.50493.1"; FPKM "9.5394802774"; frac
"1.000000"; conf_lo "2.328311"; conf_hi "16.750650"; cov
"0.609677";
+chr13 Cufflinks exon 8850038 8850347 1000 . . gene_id "CUFF.50493";
transcript_id "CUFF.50493.1"; exon_number "1"; FPKM
"9.5394802774"; frac "1.000000"; conf_lo "2.328311"; conf_hi
"16.750650"; cov "0.609677";
+chr13 Cufflinks transcript 8864952 8864979 1000 . . gene_id "CUFF.50495";
transcript_id "CUFF.50495.1"; FPKM "75.4397674996"; frac
"1.000000"; conf_lo "7.964388"; conf_hi "142.915147"; cov
"4.821429";
+chr13 Cufflinks exon 8864952 8864979 1000 . . gene_id "CUFF.50495";
transcript_id "CUFF.50495.1"; exon_number "1"; FPKM
"75.4397674996"; frac "1.000000"; conf_lo "7.964388";
conf_hi "142.915147"; cov "4.821429";
+chr13 Cufflinks transcript 8855128 8864773 1000 - . gene_id "CUFF.50497";
transcript_id "CUFF.50497.1"; FPKM "6.4009499697"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "19.202850"; cov
"0.409091";
+chr13 Cufflinks exon 8855128 8855158 1000 - . gene_id "CUFF.50497";
transcript_id "CUFF.50497.1"; exon_number "1"; FPKM
"6.4009499697"; frac "1.000000"; conf_lo "0.000000"; conf_hi
"19.202850"; cov "0.409091";
+chr13 Cufflinks exon 8864739 8864773 1000 - . gene_id "CUFF.50497";
transcript_id "CUFF.50497.1"; exon_number "2"; FPKM
"6.4009499697"; frac "1.000000"; conf_lo "0.000000"; conf_hi
"19.202850"; cov "0.409091";
+chr13 Cufflinks transcript 8965678 8965704 1000 . . gene_id "CUFF.50499";
transcript_id "CUFF.50499.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 8965678 8965704 1000 . . gene_id "CUFF.50499";
transcript_id "CUFF.50499.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 8972036 8972065 1000 . . gene_id "CUFF.50501";
transcript_id "CUFF.50501.1"; FPKM "112.6567194661"; frac
"1.000000"; conf_lo "32.996389"; conf_hi "192.317050"; cov
"7.200000";
+chr13 Cufflinks exon 8972036 8972065 1000 . . gene_id "CUFF.50501";
transcript_id "CUFF.50501.1"; exon_number "1"; FPKM
"112.6567194661"; frac "1.000000"; conf_lo "32.996389";
conf_hi "192.317050"; cov "7.200000";
+chr13 Cufflinks transcript 9133705 9133859 1000 . . gene_id "CUFF.50503";
transcript_id "CUFF.50503.1"; FPKM "8.1766973806"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "17.618334"; cov
"0.522581";
+chr13 Cufflinks exon 9133705 9133859 1000 . . gene_id "CUFF.50503";
transcript_id "CUFF.50503.1"; exon_number "1"; FPKM
"8.1766973806"; frac "1.000000"; conf_lo "0.000000"; conf_hi
"17.618334"; cov "0.522581";
+chr13 Cufflinks transcript 9134178 9134256 1000 . . gene_id "CUFF.50505";
transcript_id "CUFF.50505.1"; FPKM "10.6952581772"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "25.820637"; cov
"0.683544";
+chr13 Cufflinks exon 9134178 9134256 1000 . . gene_id "CUFF.50505";
transcript_id "CUFF.50505.1"; exon_number "1"; FPKM
"10.6952581772"; frac "1.000000"; conf_lo "0.000000";
conf_hi "25.820637"; cov "0.683544";
+chr13 Cufflinks transcript 9272120 9272153 1000 . . gene_id "CUFF.50507";
transcript_id "CUFF.50507.1"; FPKM "24.8212432986"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "59.944638"; cov
"1.586350";
+chr13 Cufflinks exon 9272120 9272153 1000 . . gene_id "CUFF.50507";
transcript_id "CUFF.50507.1"; exon_number "1"; FPKM
"24.8212432986"; frac "1.000000"; conf_lo "0.000000";
conf_hi "59.944638"; cov "1.586350";
+chr13 Cufflinks transcript 9169898 9172437 1000 + . gene_id "CUFF.50509";
transcript_id "CUFF.50509.1"; FPKM "41.4918721248"; frac
"1.000000"; conf_lo "16.471332"; conf_hi "66.512412"; cov
"2.651786";
+chr13 Cufflinks exon 9169898 9169928 1000 + . gene_id "CUFF.50509";
transcript_id "CUFF.50509.1"; exon_number "1"; FPKM
"41.4918721248"; frac "1.000000"; conf_lo "16.471332";
conf_hi "66.512412"; cov "2.651786";
+chr13 Cufflinks exon 9172357 9172437 1000 + . gene_id "CUFF.50509";
transcript_id "CUFF.50509.1"; exon_number "2"; FPKM
"41.4918721248"; frac "1.000000"; conf_lo "16.471332";
conf_hi "66.512412"; cov "2.651786";
+chr13 Cufflinks transcript 9171841 9172220 1000 . . gene_id "CUFF.50511";
transcript_id "CUFF.50511.1"; FPKM "108.9509063258"; frac
"1.000000"; conf_lo "86.939499"; conf_hi "130.962313"; cov
"6.963158";
+chr13 Cufflinks exon 9171841 9172220 1000 . . gene_id "CUFF.50511";
transcript_id "CUFF.50511.1"; exon_number "1"; FPKM
"108.9509063258"; frac "1.000000"; conf_lo "86.939499";
conf_hi "130.962313"; cov "6.963158";
+chr13 Cufflinks transcript 9172647 9173652 1000 . . gene_id "CUFF.50513";
transcript_id "CUFF.50513.1"; FPKM "111.9143215254"; frac
"1.000000"; conf_lo "98.203357"; conf_hi "125.625287"; cov
"7.152553";
+chr13 Cufflinks exon 9172647 9173652 1000 . . gene_id "CUFF.50513";
transcript_id "CUFF.50513.1"; exon_number "1"; FPKM
"111.9143215254"; frac "1.000000"; conf_lo "98.203357";
conf_hi "125.625287"; cov "7.152553";
+chr13 Cufflinks transcript 9277893 9277953 1000 . . gene_id "CUFF.50515";
transcript_id "CUFF.50515.1"; FPKM "13.8512359999"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "33.439842"; cov
"0.885246";
+chr13 Cufflinks exon 9277893 9277953 1000 . . gene_id "CUFF.50515";
transcript_id "CUFF.50515.1"; exon_number "1"; FPKM
"13.8512359999"; frac "1.000000"; conf_lo "0.000000";
conf_hi "33.439842"; cov "0.885246";
+chr13 Cufflinks transcript 9278033 9278094 1000 . . gene_id "CUFF.50517";
transcript_id "CUFF.50517.1"; FPKM "13.6278289677"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "32.900490"; cov
"0.870968";
+chr13 Cufflinks exon 9278033 9278094 1000 . . gene_id "CUFF.50517";
transcript_id "CUFF.50517.1"; exon_number "1"; FPKM
"13.6278289677"; frac "1.000000"; conf_lo "0.000000";
conf_hi "32.900490"; cov "0.870968";
+chr13 Cufflinks transcript 9278482 9278551 1000 . . gene_id "CUFF.50519";
transcript_id "CUFF.50519.1"; FPKM "18.1055441999"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "39.012026"; cov
"1.157143";
+chr13 Cufflinks exon 9278482 9278551 1000 . . gene_id "CUFF.50519";
transcript_id "CUFF.50519.1"; exon_number "1"; FPKM
"18.1055441999"; frac "1.000000"; conf_lo "0.000000";
conf_hi "39.012026"; cov "1.157143";
+chr13 Cufflinks transcript 9278167 9278308 1000 . . gene_id "CUFF.50521";
transcript_id "CUFF.50521.1"; FPKM "17.8505365351"; frac
"1.000000"; conf_lo "3.275634"; conf_hi "32.425439"; cov
"1.140845";
+chr13 Cufflinks exon 9278167 9278308 1000 . . gene_id "CUFF.50521";
transcript_id "CUFF.50521.1"; exon_number "1"; FPKM
"17.8505365351"; frac "1.000000"; conf_lo "3.275634";
conf_hi "32.425439"; cov "1.140845";
+chr13 Cufflinks transcript 9346823 9346849 1000 . . gene_id "CUFF.50523";
transcript_id "CUFF.50523.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 9346823 9346849 1000 . . gene_id "CUFF.50523";
transcript_id "CUFF.50523.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 9373600 9373693 1000 . . gene_id "CUFF.50525";
transcript_id "CUFF.50525.1"; FPKM "8.9885680425"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "21.700323"; cov
"0.574468";
+chr13 Cufflinks exon 9373600 9373693 1000 . . gene_id "CUFF.50525";
transcript_id "CUFF.50525.1"; exon_number "1"; FPKM
"8.9885680425"; frac "1.000000"; conf_lo "0.000000"; conf_hi
"21.700323"; cov "0.574468";
+chr13 Cufflinks transcript 9353602 9373527 1000 - . gene_id "CUFF.50527";
transcript_id "CUFF.50527.1"; FPKM "16.2485653076"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "35.010792"; cov
"1.038462";
+chr13 Cufflinks exon 9353602 9353648 1000 - . gene_id "CUFF.50527";
transcript_id "CUFF.50527.1"; exon_number "1"; FPKM
"16.2485653076"; frac "1.000000"; conf_lo "0.000000";
conf_hi "35.010792"; cov "1.038462";
+chr13 Cufflinks exon 9373497 9373527 1000 - . gene_id "CUFF.50527";
transcript_id "CUFF.50527.1"; exon_number "2"; FPKM
"16.2485653076"; frac "1.000000"; conf_lo "0.000000";
conf_hi "35.010792"; cov "1.038462";
+chr13 Cufflinks transcript 9386521 9386547 1000 . . gene_id "CUFF.50529";
transcript_id "CUFF.50529.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 9386521 9386547 1000 . . gene_id "CUFF.50529";
transcript_id "CUFF.50529.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 9391996 9392202 1000 . . gene_id "CUFF.50531";
transcript_id "CUFF.50531.1"; FPKM "12.2404495852"; frac
"1.000000"; conf_lo "2.244186"; conf_hi "22.236713"; cov
"0.782299";
+chr13 Cufflinks exon 9391996 9392202 1000 . . gene_id "CUFF.50531";
transcript_id "CUFF.50531.1"; exon_number "1"; FPKM
"12.2404495852"; frac "1.000000"; conf_lo "2.244186";
conf_hi "22.236713"; cov "0.782299";
+chr13 Cufflinks transcript 9392422 9392467 1000 . . gene_id "CUFF.50533";
transcript_id "CUFF.50533.1"; FPKM "9.1839716956"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "27.551915"; cov
"0.586957";
+chr13 Cufflinks exon 9392422 9392467 1000 . . gene_id "CUFF.50533";
transcript_id "CUFF.50533.1"; exon_number "1"; FPKM
"9.1839716956"; frac "1.000000"; conf_lo "0.000000"; conf_hi
"27.551915"; cov "0.586957";
+chr13 Cufflinks transcript 9392265 9392321 1000 . . gene_id "CUFF.50535";
transcript_id "CUFF.50535.1"; FPKM "14.8232525613"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "35.786497"; cov
"0.947368";
+chr13 Cufflinks exon 9392265 9392321 1000 . . gene_id "CUFF.50535";
transcript_id "CUFF.50535.1"; exon_number "1"; FPKM
"14.8232525613"; frac "1.000000"; conf_lo "0.000000";
conf_hi "35.786497"; cov "0.947368";
+chr13 Cufflinks transcript 9392577 9392603 1000 . . gene_id "CUFF.50537";
transcript_id "CUFF.50537.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 9392577 9392603 1000 . . gene_id "CUFF.50537";
transcript_id "CUFF.50537.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 9396631 9396825 1000 . . gene_id "CUFF.50539";
transcript_id "CUFF.50539.1"; FPKM "8.6659014974"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "17.331803"; cov
"0.553846";
+chr13 Cufflinks exon 9396631 9396825 1000 . . gene_id "CUFF.50539";
transcript_id "CUFF.50539.1"; exon_number "1"; FPKM
"8.6659014974"; frac "1.000000"; conf_lo "0.000000"; conf_hi
"17.331803"; cov "0.553846";
+chr13 Cufflinks transcript 9397263 9397434 1000 . . gene_id "CUFF.50541";
transcript_id "CUFF.50541.1"; FPKM "17.1932493371"; frac
"1.000000"; conf_lo "4.196374"; conf_hi "30.190124"; cov
"1.098837";
+chr13 Cufflinks exon 9397263 9397434 1000 . . gene_id "CUFF.50541";
transcript_id "CUFF.50541.1"; exon_number "1"; FPKM
"17.1932493371"; frac "1.000000"; conf_lo "4.196374";
conf_hi "30.190124"; cov "1.098837";
+chr13 Cufflinks transcript 9398210 9398294 1000 . . gene_id "CUFF.50543";
transcript_id "CUFF.50543.1"; FPKM "9.9402987764"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "23.998004"; cov
"0.635294";
+chr13 Cufflinks exon 9398210 9398294 1000 . . gene_id "CUFF.50543";
transcript_id "CUFF.50543.1"; exon_number "1"; FPKM
"9.9402987764"; frac "1.000000"; conf_lo "0.000000"; conf_hi
"23.998004"; cov "0.635294";
+chr13 Cufflinks transcript 9406013 9406051 1000 . . gene_id "CUFF.50545";
transcript_id "CUFF.50545.1"; FPKM "10.8323768717"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "32.497131"; cov
"0.692308";
+chr13 Cufflinks exon 9406013 9406051 1000 . . gene_id "CUFF.50545";
transcript_id "CUFF.50545.1"; exon_number "1"; FPKM
"10.8323768717"; frac "1.000000"; conf_lo "0.000000";
conf_hi "32.497131"; cov "0.692308";
+chr13 Cufflinks transcript 9413644 9413670 1000 . . gene_id "CUFF.50547";
transcript_id "CUFF.50547.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 9413644 9413670 1000 . . gene_id "CUFF.50547";
transcript_id "CUFF.50547.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 9414053 9414143 1000 . . gene_id "CUFF.50549";
transcript_id "CUFF.50549.1"; FPKM "9.2848944615"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "22.415718"; cov
"0.593407";
+chr13 Cufflinks exon 9414053 9414143 1000 . . gene_id "CUFF.50549";
transcript_id "CUFF.50549.1"; exon_number "1"; FPKM
"9.2848944615"; frac "1.000000"; conf_lo "0.000000"; conf_hi
"22.415718"; cov "0.593407";
+chr13 Cufflinks transcript 9415960 9416015 1000 . . gene_id "CUFF.50551";
transcript_id "CUFF.50551.1"; FPKM "15.0879534999"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "36.425542"; cov
"0.964286";
+chr13 Cufflinks exon 9415960 9416015 1000 . . gene_id "CUFF.50551";
transcript_id "CUFF.50551.1"; exon_number "1"; FPKM
"15.0879534999"; frac "1.000000"; conf_lo "0.000000";
conf_hi "36.425542"; cov "0.964286";
+chr13 Cufflinks transcript 9442325 9442351 1000 . . gene_id "CUFF.50553";
transcript_id "CUFF.50553.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 9442325 9442351 1000 . . gene_id "CUFF.50553";
transcript_id "CUFF.50553.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 9517895 9517921 1000 . . gene_id "CUFF.50555";
transcript_id "CUFF.50555.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 9517895 9517921 1000 . . gene_id "CUFF.50555";
transcript_id "CUFF.50555.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 9584154 9584180 1000 . . gene_id "CUFF.50558";
transcript_id "CUFF.50558.1"; FPKM "46.9402997776"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "101.142289"; cov
"3.000000";
+chr13 Cufflinks exon 9584154 9584180 1000 . . gene_id "CUFF.50558";
transcript_id "CUFF.50558.1"; exon_number "1"; FPKM
"46.9402997776"; frac "1.000000"; conf_lo "0.000000";
conf_hi "101.142289"; cov "3.000000";
+chr13 Cufflinks transcript 9583821 9583888 1000 . . gene_id "CUFF.50557";
transcript_id "CUFF.50557.1"; FPKM "12.4253734705"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "29.997505"; cov
"0.794118";
+chr13 Cufflinks exon 9583821 9583888 1000 . . gene_id "CUFF.50557";
transcript_id "CUFF.50557.1"; exon_number "1"; FPKM
"12.4253734705"; frac "1.000000"; conf_lo "0.000000";
conf_hi "29.997505"; cov "0.794118";
+chr13 Cufflinks transcript 9585768 9585937 1000 . . gene_id "CUFF.50561";
transcript_id "CUFF.50561.1"; FPKM "9.9402987764"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "19.880598"; cov
"0.635294";
+chr13 Cufflinks exon 9585768 9585937 1000 . . gene_id "CUFF.50561";
transcript_id "CUFF.50561.1"; exon_number "1"; FPKM
"9.9402987764"; frac "1.000000"; conf_lo "0.000000"; conf_hi
"19.880598"; cov "0.635294";
+chr13 Cufflinks transcript 9586173 9593034 1000 - . gene_id "CUFF.50563";
transcript_id "CUFF.50563.1"; FPKM "10.3039682439"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "24.875980"; cov
"0.658537";
+chr13 Cufflinks exon 9586173 9586218 1000 - . gene_id "CUFF.50563";
transcript_id "CUFF.50563.1"; exon_number "1"; FPKM
"10.3039682439"; frac "1.000000"; conf_lo "0.000000";
conf_hi "24.875980"; cov "0.658537";
+chr13 Cufflinks exon 9592999 9593034 1000 - . gene_id "CUFF.50563";
transcript_id "CUFF.50563.1"; exon_number "2"; FPKM
"10.3039682439"; frac "1.000000"; conf_lo "0.000000";
conf_hi "24.875980"; cov "0.658537";
+chr13 Cufflinks transcript 9609217 9609243 1000 . . gene_id "CUFF.50566";
transcript_id "CUFF.50566.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 9609217 9609243 1000 . . gene_id "CUFF.50566";
transcript_id "CUFF.50566.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 9607682 9607717 1000 . . gene_id "CUFF.50565";
transcript_id "CUFF.50565.1"; FPKM "23.4701498888"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "56.661954"; cov
"1.500000";
+chr13 Cufflinks exon 9607682 9607717 1000 . . gene_id "CUFF.50565";
transcript_id "CUFF.50565.1"; exon_number "1"; FPKM
"23.4701498888"; frac "1.000000"; conf_lo "0.000000";
conf_hi "56.661954"; cov "1.500000";
+chr13 Cufflinks transcript 9678669 9678695 1000 . . gene_id "CUFF.50569";
transcript_id "CUFF.50569.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 9678669 9678695 1000 . . gene_id "CUFF.50569";
transcript_id "CUFF.50569.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 9667710 9667736 1000 . . gene_id "CUFF.50571";
transcript_id "CUFF.50571.1"; FPKM "140.7837465978"; frac
"1.000000"; conf_lo "46.915532"; conf_hi "234.651961"; cov
"8.997626";
+chr13 Cufflinks exon 9667710 9667736 1000 . . gene_id "CUFF.50571";
transcript_id "CUFF.50571.1"; exon_number "1"; FPKM
"140.7837465978"; frac "1.000000"; conf_lo "46.915532";
conf_hi "234.651961"; cov "8.997626";
+chr13 Cufflinks transcript 9667815 9668061 1000 . . gene_id "CUFF.50573";
transcript_id "CUFF.50573.1"; FPKM "87.1763440808"; frac
"1.000000"; conf_lo "62.754693"; conf_hi "111.597996"; cov
"5.571525";
+chr13 Cufflinks exon 9667815 9668061 1000 . . gene_id "CUFF.50573";
transcript_id "CUFF.50573.1"; exon_number "1"; FPKM
"87.1763440808"; frac "1.000000"; conf_lo "62.754693";
conf_hi "111.597996"; cov "5.571525";
+chr13 Cufflinks transcript 9668143 9668170 1000 . . gene_id "CUFF.50575";
transcript_id "CUFF.50575.1"; FPKM "82.8583537693"; frac
"1.000000"; conf_lo "12.143066"; conf_hi "153.573642"; cov
"5.295558";
+chr13 Cufflinks exon 9668143 9668170 1000 . . gene_id "CUFF.50575";
transcript_id "CUFF.50575.1"; exon_number "1"; FPKM
"82.8583537693"; frac "1.000000"; conf_lo "12.143066";
conf_hi "153.573642"; cov "5.295558";
+chr13 Cufflinks transcript 9688931 9688970 1000 . . gene_id "CUFF.50577";
transcript_id "CUFF.50577.1"; FPKM "21.1231348999"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "50.995759"; cov
"1.350000";
+chr13 Cufflinks exon 9688931 9688970 1000 . . gene_id "CUFF.50577";
transcript_id "CUFF.50577.1"; exon_number "1"; FPKM
"21.1231348999"; frac "1.000000"; conf_lo "0.000000";
conf_hi "50.995759"; cov "1.350000";
+chr13 Cufflinks transcript 9684078 9685570 1000 . . gene_id "CUFF.50579";
transcript_id "CUFF.50579.1"; FPKM "107.1082431700"; frac
"1.000000"; conf_lo "96.097777"; conf_hi "118.118710"; cov
"6.845392";
+chr13 Cufflinks exon 9684078 9685570 1000 . . gene_id "CUFF.50579";
transcript_id "CUFF.50579.1"; exon_number "1"; FPKM
"107.1082431700"; frac "1.000000"; conf_lo "96.097777";
conf_hi "118.118710"; cov "6.845392";
+chr13 Cufflinks transcript 9690151 9690234 1000 . . gene_id "CUFF.50581";
transcript_id "CUFF.50581.1"; FPKM "10.0586356666"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "24.283695"; cov
"0.642857";
+chr13 Cufflinks exon 9690151 9690234 1000 . . gene_id "CUFF.50581";
transcript_id "CUFF.50581.1"; exon_number "1"; FPKM
"10.0586356666"; frac "1.000000"; conf_lo "0.000000";
conf_hi "24.283695"; cov "0.642857";
+chr13 Cufflinks transcript 9694461 9694537 1000 . . gene_id "CUFF.50583";
transcript_id "CUFF.50583.1"; FPKM "16.4595856363"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "35.465478"; cov
"1.051948";
+chr13 Cufflinks exon 9694461 9694537 1000 . . gene_id "CUFF.50583";
transcript_id "CUFF.50583.1"; exon_number "1"; FPKM
"16.4595856363"; frac "1.000000"; conf_lo "0.000000";
conf_hi "35.465478"; cov "1.051948";
+chr13 Cufflinks transcript 9696900 9696976 1000 . . gene_id "CUFF.50585";
transcript_id "CUFF.50585.1"; FPKM "10.9730570909"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "26.491303"; cov
"0.701299";
+chr13 Cufflinks exon 9696900 9696976 1000 . . gene_id "CUFF.50585";
transcript_id "CUFF.50585.1"; exon_number "1"; FPKM
"10.9730570909"; frac "1.000000"; conf_lo "0.000000";
conf_hi "26.491303"; cov "0.701299";
+chr13 Cufflinks transcript 9725686 9725787 1000 . . gene_id "CUFF.50587";
transcript_id "CUFF.50587.1"; FPKM "12.4253734705"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "26.772959"; cov
"0.794118";
+chr13 Cufflinks exon 9725686 9725787 1000 . . gene_id "CUFF.50587";
transcript_id "CUFF.50587.1"; exon_number "1"; FPKM
"12.4253734705"; frac "1.000000"; conf_lo "0.000000";
conf_hi "26.772959"; cov "0.794118";
+chr13 Cufflinks transcript 9725935 9726047 1000 . . gene_id "CUFF.50589";
transcript_id "CUFF.50589.1"; FPKM "11.2158238407"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "24.166742"; cov
"0.716814";
+chr13 Cufflinks exon 9725935 9726047 1000 . . gene_id "CUFF.50589";
transcript_id "CUFF.50589.1"; exon_number "1"; FPKM
"11.2158238407"; frac "1.000000"; conf_lo "0.000000";
conf_hi "24.166742"; cov "0.716814";
+chr13 Cufflinks transcript 9739796 9739868 1000 . . gene_id "CUFF.50591";
transcript_id "CUFF.50591.1"; FPKM "11.5743204931"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "27.942882"; cov
"0.739726";
+chr13 Cufflinks exon 9739796 9739868 1000 . . gene_id "CUFF.50591";
transcript_id "CUFF.50591.1"; exon_number "1"; FPKM
"11.5743204931"; frac "1.000000"; conf_lo "0.000000";
conf_hi "27.942882"; cov "0.739726";
+chr13 Cufflinks transcript 9740164 9740202 1000 . . gene_id "CUFF.50593";
transcript_id "CUFF.50593.1"; FPKM "21.6647537435"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "52.303342"; cov
"1.384615";
+chr13 Cufflinks exon 9740164 9740202 1000 . . gene_id "CUFF.50593";
transcript_id "CUFF.50593.1"; exon_number "1"; FPKM
"21.6647537435"; frac "1.000000"; conf_lo "0.000000";
conf_hi "52.303342"; cov "1.384615";
+chr13 Cufflinks transcript 9740296 9740330 1000 . . gene_id "CUFF.50595";
transcript_id "CUFF.50595.1"; FPKM "48.2814511998"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "96.562902"; cov
"3.085714";
+chr13 Cufflinks exon 9740296 9740330 1000 . . gene_id "CUFF.50595";
transcript_id "CUFF.50595.1"; exon_number "1"; FPKM
"48.2814511998"; frac "1.000000"; conf_lo "0.000000";
conf_hi "96.562902"; cov "3.085714";
+chr13 Cufflinks transcript 9741046 9741127 1000 . . gene_id "CUFF.50597";
transcript_id "CUFF.50597.1"; FPKM "10.3039682439"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "24.875980"; cov
"0.658537";
+chr13 Cufflinks exon 9741046 9741127 1000 . . gene_id "CUFF.50597";
transcript_id "CUFF.50597.1"; exon_number "1"; FPKM
"10.3039682439"; frac "1.000000"; conf_lo "0.000000";
conf_hi "24.875980"; cov "0.658537";
+chr13 Cufflinks transcript 9741590 9741694 1000 . . gene_id "CUFF.50599";
transcript_id "CUFF.50599.1"; FPKM "12.0703627999"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "26.008017"; cov
"0.771429";
+chr13 Cufflinks exon 9741590 9741694 1000 . . gene_id "CUFF.50599";
transcript_id "CUFF.50599.1"; exon_number "1"; FPKM
"12.0703627999"; frac "1.000000"; conf_lo "0.000000";
conf_hi "26.008017"; cov "0.771429";
+chr13 Cufflinks transcript 9741399 9741517 1000 . . gene_id "CUFF.50601";
transcript_id "CUFF.50601.1"; FPKM "24.8507469411"; frac
"1.000000"; conf_lo "6.065348"; conf_hi "43.636146"; cov
"1.588235";
+chr13 Cufflinks exon 9741399 9741517 1000 . . gene_id "CUFF.50601";
transcript_id "CUFF.50601.1"; exon_number "1"; FPKM
"24.8507469411"; frac "1.000000"; conf_lo "6.065348";
conf_hi "43.636146"; cov "1.588235";
+chr13 Cufflinks transcript 9868979 9869072 1000 . . gene_id "CUFF.50603";
transcript_id "CUFF.50603.1"; FPKM "13.4828520638"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "29.051509"; cov
"0.861702";
+chr13 Cufflinks exon 9868979 9869072 1000 . . gene_id "CUFF.50603";
transcript_id "CUFF.50603.1"; exon_number "1"; FPKM
"13.4828520638"; frac "1.000000"; conf_lo "0.000000";
conf_hi "29.051509"; cov "0.861702";
+chr13 Cufflinks transcript 9872853 9872934 1000 . . gene_id "CUFF.50605";
transcript_id "CUFF.50605.1"; FPKM "15.4559523658"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "33.302949"; cov
"0.987805";
+chr13 Cufflinks exon 9872853 9872934 1000 . . gene_id "CUFF.50605";
transcript_id "CUFF.50605.1"; exon_number "1"; FPKM
"15.4559523658"; frac "1.000000"; conf_lo "0.000000";
conf_hi "33.302949"; cov "0.987805";
+chr13 Cufflinks transcript 9874731 9874997 1000 . . gene_id "CUFF.50607";
transcript_id "CUFF.50607.1"; FPKM "12.6580583670"; frac
"1.000000"; conf_lo "3.707459"; conf_hi "21.608657"; cov
"0.808989";
+chr13 Cufflinks exon 9874731 9874997 1000 . . gene_id "CUFF.50607";
transcript_id "CUFF.50607.1"; exon_number "1"; FPKM
"12.6580583670"; frac "1.000000"; conf_lo "3.707459";
conf_hi "21.608657"; cov "0.808989";
+chr13 Cufflinks transcript 9875128 9875201 1000 . . gene_id "CUFF.50609";
transcript_id "CUFF.50609.1"; FPKM "22.8358215134"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "45.671643"; cov
"1.459459";
+chr13 Cufflinks exon 9875128 9875201 1000 . . gene_id "CUFF.50609";
transcript_id "CUFF.50609.1"; exon_number "1"; FPKM
"22.8358215134"; frac "1.000000"; conf_lo "0.000000";
conf_hi "45.671643"; cov "1.459459";
+chr13 Cufflinks transcript 9875323 9875349 1000 . . gene_id "CUFF.50611";
transcript_id "CUFF.50611.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 9875323 9875349 1000 . . gene_id "CUFF.50611";
transcript_id "CUFF.50611.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 9875425 9875480 1000 . . gene_id "CUFF.50613";
transcript_id "CUFF.50613.1"; FPKM "15.0879534999"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "36.425542"; cov
"0.964286";
+chr13 Cufflinks exon 9875425 9875480 1000 . . gene_id "CUFF.50613";
transcript_id "CUFF.50613.1"; exon_number "1"; FPKM
"15.0879534999"; frac "1.000000"; conf_lo "0.000000";
conf_hi "36.425542"; cov "0.964286";
+chr13 Cufflinks transcript 9876121 9876172 1000 . . gene_id "CUFF.50615";
transcript_id "CUFF.50615.1"; FPKM "16.2485653076"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "39.227507"; cov
"1.038462";
+chr13 Cufflinks exon 9876121 9876172 1000 . . gene_id "CUFF.50615";
transcript_id "CUFF.50615.1"; exon_number "1"; FPKM
"16.2485653076"; frac "1.000000"; conf_lo "0.000000";
conf_hi "39.227507"; cov "1.038462";
+chr13 Cufflinks transcript 9969155 9969237 1000 . . gene_id "CUFF.50617";
transcript_id "CUFF.50617.1"; FPKM "8.6756763125"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "21.966038"; cov
"0.554471";
+chr13 Cufflinks exon 9969155 9969237 1000 . . gene_id "CUFF.50617";
transcript_id "CUFF.50617.1"; exon_number "1"; FPKM
"8.6756763125"; frac "1.000000"; conf_lo "0.000000"; conf_hi
"21.966038"; cov "0.554471";
+chr13 Cufflinks transcript 9986765 9986791 1000 . . gene_id "CUFF.50619";
transcript_id "CUFF.50619.1"; FPKM "15.6467665925"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "46.940300"; cov
"1.000000";
+chr13 Cufflinks exon 9986765 9986791 1000 . . gene_id "CUFF.50619";
transcript_id "CUFF.50619.1"; exon_number "1"; FPKM
"15.6467665925"; frac "1.000000"; conf_lo "0.000000";
conf_hi "46.940300"; cov "1.000000";
+chr13 Cufflinks transcript 9987242 9987567 1000 . . gene_id "CUFF.50621";
transcript_id "CUFF.50621.1"; FPKM "10.3671827730"; frac
"1.000000"; conf_lo "3.036478"; conf_hi "17.697888"; cov
"0.662577";
+chr13 Cufflinks exon 9987242 9987567 1000 . . gene_id "CUFF.50621";
transcript_id "CUFF.50621.1"; exon_number "1"; FPKM
"10.3671827730"; frac "1.000000"; conf_lo "3.036478";
conf_hi "17.697888"; cov "0.662577";
+chr13 Cufflinks transcript 10010160 10010265 1000 . . gene_id "CUFF.50623";
transcript_id "CUFF.50623.1"; FPKM "11.9564914528"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "25.762659"; cov
"0.764151";
+chr13 Cufflinks exon 10010160 10010265 1000 . . gene_id "CUFF.50623";
transcript_id "CUFF.50623.1"; exon_number "1"; FPKM
"11.9564914528"; frac "1.000000"; conf_lo "0.000000";
conf_hi "25.762659"; cov "0.764151";
+chr13 Cufflinks transcript 10010497 10010523 1000 . . gene_id "CUFF.50625";
transcript_id "CUFF.50625.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 10010497 10010523 1000 . . gene_id "CUFF.50625";
transcript_id "CUFF.50625.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 10012021 10012167 1000 . . gene_id "CUFF.50627";
transcript_id "CUFF.50627.1"; FPKM "11.4955836190"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "22.991167"; cov
"0.734694";
+chr13 Cufflinks exon 10012021 10012167 1000 . . gene_id "CUFF.50627";
transcript_id "CUFF.50627.1"; exon_number "1"; FPKM
"11.4955836190"; frac "1.000000"; conf_lo "0.000000";
conf_hi "22.991167"; cov "0.734694";
+chr13 Cufflinks transcript 10019657 10019683 1000 . . gene_id "CUFF.50629";
transcript_id "CUFF.50629.1"; FPKM "46.9402997776"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "101.142289"; cov
"3.000000";
+chr13 Cufflinks exon 10019657 10019683 1000 . . gene_id "CUFF.50629";
transcript_id "CUFF.50629.1"; exon_number "1"; FPKM
"46.9402997776"; frac "1.000000"; conf_lo "0.000000";
conf_hi "101.142289"; cov "3.000000";
+chr13 Cufflinks transcript 10024965 10025028 1000 . . gene_id "CUFF.50631";
transcript_id "CUFF.50631.1"; FPKM "13.2019593124"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "31.872349"; cov
"0.843750";
+chr13 Cufflinks exon 10024965 10025028 1000 . . gene_id "CUFF.50631";
transcript_id "CUFF.50631.1"; exon_number "1"; FPKM
"13.2019593124"; frac "1.000000"; conf_lo "0.000000";
conf_hi "31.872349"; cov "0.843750";
+chr13 Cufflinks transcript 10082104 10082206 1000 . . gene_id "CUFF.50633";
transcript_id "CUFF.50633.1"; FPKM "8.2031591844"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "19.804178"; cov
"0.524272";
+chr13 Cufflinks exon 10082104 10082206 1000 . . gene_id "CUFF.50633";
transcript_id "CUFF.50633.1"; exon_number "1"; FPKM
"8.2031591844"; frac "1.000000"; conf_lo "0.000000"; conf_hi
"19.804178"; cov "0.524272";
+chr13 Cufflinks transcript 10086419 10086446 1000 . . gene_id "CUFF.50635";
transcript_id "CUFF.50635.1"; FPKM "60.3518139997"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "120.703628"; cov
"3.857143";
+chr13 Cufflinks exon 10086419 10086446 1000 . . gene_id "CUFF.50635";
transcript_id "CUFF.50635.1"; exon_number "1"; FPKM
"60.3518139997"; frac "1.000000"; conf_lo "0.000000";
conf_hi "120.703628"; cov "3.857143";
+chr13 Cufflinks transcript 10086886 10086930 1000 . . gene_id "CUFF.50637";
transcript_id "CUFF.50637.1"; FPKM "18.7761199110"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "45.329563"; cov
"1.200000";
+chr13 Cufflinks exon 10086886 10086930 1000 . . gene_id "CUFF.50637";
transcript_id "CUFF.50637.1"; exon_number "1"; FPKM
"18.7761199110"; frac "1.000000"; conf_lo "0.000000";
conf_hi "45.329563"; cov "1.200000";
+chr13 Cufflinks transcript 10096818 10096844 1000 . . gene_id "CUFF.50639";
transcript_id "CUFF.50639.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 10096818 10096844 1000 . . gene_id "CUFF.50639";
transcript_id "CUFF.50639.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 10111271 10111358 1000 . . gene_id "CUFF.50641";
transcript_id "CUFF.50641.1"; FPKM "9.6014249545"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "23.179890"; cov
"0.613636";
+chr13 Cufflinks exon 10111271 10111358 1000 . . gene_id "CUFF.50641";
transcript_id "CUFF.50641.1"; exon_number "1"; FPKM
"9.6014249545"; frac "1.000000"; conf_lo "0.000000"; conf_hi
"23.179890"; cov "0.613636";
+chr13 Cufflinks transcript 10182192 10182228 1000 . . gene_id "CUFF.50643";
transcript_id "CUFF.50643.1"; FPKM "34.2537322701"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "73.806535"; cov
"2.189189";
+chr13 Cufflinks exon 10182192 10182228 1000 . . gene_id "CUFF.50643";
transcript_id "CUFF.50643.1"; exon_number "1"; FPKM
"34.2537322701"; frac "1.000000"; conf_lo "0.000000";
conf_hi "73.806535"; cov "2.189189";
+chr13 Cufflinks transcript 10189009 10189035 1000 . . gene_id "CUFF.50645";
transcript_id "CUFF.50645.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 10189009 10189035 1000 . . gene_id "CUFF.50645";
transcript_id "CUFF.50645.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 10197772 10197798 1000 . . gene_id "CUFF.50647";
transcript_id "CUFF.50647.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 10197772 10197798 1000 . . gene_id "CUFF.50647";
transcript_id "CUFF.50647.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 10200086 10200124 1000 . . gene_id "CUFF.50649";
transcript_id "CUFF.50649.1"; FPKM "21.6647537435"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "52.303342"; cov
"1.384615";
+chr13 Cufflinks exon 10200086 10200124 1000 . . gene_id "CUFF.50649";
transcript_id "CUFF.50649.1"; exon_number "1"; FPKM
"21.6647537435"; frac "1.000000"; conf_lo "0.000000";
conf_hi "52.303342"; cov "1.384615";
+chr13 Cufflinks transcript 10213412 10213536 1000 . . gene_id "CUFF.50651";
transcript_id "CUFF.50651.1"; FPKM "13.5188063359"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "27.037613"; cov
"0.864000";
+chr13 Cufflinks exon 10213412 10213536 1000 . . gene_id "CUFF.50651";
transcript_id "CUFF.50651.1"; exon_number "1"; FPKM
"13.5188063359"; frac "1.000000"; conf_lo "0.000000";
conf_hi "27.037613"; cov "0.864000";
+chr13 Cufflinks transcript 10223893 10223941 1000 . . gene_id "CUFF.50653";
transcript_id "CUFF.50653.1"; FPKM "17.2433754285"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "41.629191"; cov
"1.102041";
+chr13 Cufflinks exon 10223893 10223941 1000 . . gene_id "CUFF.50653";
transcript_id "CUFF.50653.1"; exon_number "1"; FPKM
"17.2433754285"; frac "1.000000"; conf_lo "0.000000";
conf_hi "41.629191"; cov "1.102041";
+chr13 Cufflinks transcript 10289392 10289437 1000 . . gene_id "CUFF.50655";
transcript_id "CUFF.50655.1"; FPKM "18.3679433912"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "44.344138"; cov
"1.173913";
+chr13 Cufflinks exon 10289392 10289437 1000 . . gene_id "CUFF.50655";
transcript_id "CUFF.50655.1"; exon_number "1"; FPKM
"18.3679433912"; frac "1.000000"; conf_lo "0.000000";
conf_hi "44.344138"; cov "1.173913";
+chr13 Cufflinks transcript 10326745 10326771 1000 . . gene_id "CUFF.50657";
transcript_id "CUFF.50657.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 10326745 10326771 1000 . . gene_id "CUFF.50657";
transcript_id "CUFF.50657.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 10346675 10346701 1000 . . gene_id "CUFF.50659";
transcript_id "CUFF.50659.1"; FPKM "31.2935331850"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "75.549272"; cov
"2.000000";
+chr13 Cufflinks exon 10346675 10346701 1000 . . gene_id "CUFF.50659";
transcript_id "CUFF.50659.1"; exon_number "1"; FPKM
"31.2935331850"; frac "1.000000"; conf_lo "0.000000";
conf_hi "75.549272"; cov "2.000000";
+chr13 Cufflinks transcript 10337071 10337097 1000 . . gene_id "CUFF.50661";
transcript_id "CUFF.50661.1"; FPKM "15.6467665925"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "46.940300"; cov
"1.000000";
+chr13 Cufflinks exon 10337071 10337097 1000 . . gene_id "CUFF.50661";
transcript_id "CUFF.50661.1"; exon_number "1"; FPKM
"15.6467665925"; frac "1.000000"; conf_lo "0.000000";
conf_hi "46.940300"; cov "1.000000";
+chr13 Cufflinks transcript 10337141 10337167 1000 . . gene_id "CUFF.50663";
transcript_id "CUFF.50663.1"; FPKM "15.6467665925"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "46.940300"; cov
"1.000000";
+chr13 Cufflinks exon 10337141 10337167 1000 . . gene_id "CUFF.50663";
transcript_id "CUFF.50663.1"; exon_number "1"; FPKM
"15.6467665925"; frac "1.000000"; conf_lo "0.000000";
conf_hi "46.940300"; cov "1.000000";
+chr13 Cufflinks transcript 10344376 10344402 1000 . . gene_id "CUFF.50665";
transcript_id "CUFF.50665.1"; FPKM "46.9402997776"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "101.142289"; cov
"3.000000";
+chr13 Cufflinks exon 10344376 10344402 1000 . . gene_id "CUFF.50665";
transcript_id "CUFF.50665.1"; exon_number "1"; FPKM
"46.9402997776"; frac "1.000000"; conf_lo "0.000000";
conf_hi "101.142289"; cov "3.000000";
+chr13 Cufflinks transcript 10344976 10345002 1000 . . gene_id "CUFF.50667";
transcript_id "CUFF.50667.1"; FPKM "15.6467665925"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "46.940300"; cov
"1.000000";
+chr13 Cufflinks exon 10344976 10345002 1000 . . gene_id "CUFF.50667";
transcript_id "CUFF.50667.1"; exon_number "1"; FPKM
"15.6467665925"; frac "1.000000"; conf_lo "0.000000";
conf_hi "46.940300"; cov "1.000000";
+chr13 Cufflinks transcript 10345008 10345034 1000 . . gene_id "CUFF.50669";
transcript_id "CUFF.50669.1"; FPKM "15.6467665925"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "46.940300"; cov
"1.000000";
+chr13 Cufflinks exon 10345008 10345034 1000 . . gene_id "CUFF.50669";
transcript_id "CUFF.50669.1"; exon_number "1"; FPKM
"15.6467665925"; frac "1.000000"; conf_lo "0.000000";
conf_hi "46.940300"; cov "1.000000";
+chr13 Cufflinks transcript 10345484 10345510 1000 . . gene_id "CUFF.50671";
transcript_id "CUFF.50671.1"; FPKM "15.6467665925"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "46.940300"; cov
"1.000000";
+chr13 Cufflinks exon 10345484 10345510 1000 . . gene_id "CUFF.50671";
transcript_id "CUFF.50671.1"; exon_number "1"; FPKM
"15.6467665925"; frac "1.000000"; conf_lo "0.000000";
conf_hi "46.940300"; cov "1.000000";
+chr13 Cufflinks transcript 10345538 10345564 1000 . . gene_id "CUFF.50673";
transcript_id "CUFF.50673.1"; FPKM "15.6467665925"; frac
"1.000000"; conf_lo "0.000000"; conf_hi "46.940300"; cov
"1.000000";
+chr13 Cufflinks exon 10345538 10345564 1000 . . gene_id "CUFF.50673";
transcript_id "CUFF.50673.1"; exon_number "1"; FPKM
"15.6467665925"; frac "1.000000"; conf_lo "0.000000";
conf_hi "46.940300"; cov "1.000000";
--- a/lib/galaxy/datatypes/registry.py
+++ b/lib/galaxy/datatypes/registry.py
@@ -158,6 +158,7 @@ class Registry( object ):
'fasta' : sequence.Fasta(),
'fastq' : sequence.Fastq(),
'fastqsanger' : sequence.FastqSanger(),
+ 'gtf' : interval.Gtf(),
'gff' : interval.Gff(),
'gff3' : interval.Gff3(),
'genetrack' : tracks.GeneTrack(),
@@ -190,6 +191,7 @@ class Registry( object ):
'fasta' : 'text/plain',
'fastq' : 'text/plain',
'fastqsanger' : 'text/plain',
+ 'gtf' : 'text/plain',
'gff' : 'text/plain',
'gff3' : 'text/plain',
'interval' : 'text/plain',
@@ -228,6 +230,7 @@ class Registry( object ):
sequence.Axt(),
interval.Bed(),
interval.CustomTrack(),
+ interval.Gtf(),
interval.Gff(),
interval.Gff3(),
tabular.Pileup(),