1 new changeset in galaxy-central:
http://bitbucket.org/galaxy/galaxy-central/changeset/1a544e327b3d/
changeset: r5121:1a544e327b3d
user: kanwei
date: 2011-02-24 21:23:21
summary: Fix bed_to_bigBed test
affected #: 2 files (18 bytes)
--- a/buildbot_setup.sh Thu Feb 24 15:07:46 2011 -0500
+++ b/buildbot_setup.sh Thu Feb 24 15:23:21 2011 -0500
@@ -109,7 +109,7 @@
fi
done
-# for wig_to_bigWig
+# for wig_to_bigWig and bed_to_bigBed
if [ ! -f "tool-data/shared/ucsc/chrom/hg17.len" -a -f
"test-data/wig_to_bigwig_hg17.len" ]; then
mkdir -p tool-data/shared/ucsc/chrom
cp test-data/wig_to_bigwig_hg17.len tool-data/shared/ucsc/chrom/hg17.len
--- a/tools/filters/bed_to_bigbed.xml Thu Feb 24 15:07:46 2011 -0500
+++ b/tools/filters/bed_to_bigbed.xml Thu Feb 24 15:23:21 2011 -0500
@@ -31,7 +31,7 @@
</outputs><tests><test>
- <param name="input1" value="7.bed" dbkey="hg18"
/>
+ <param name="input1" value="7.bed" dbkey="hg17"
/><param name="settingsType" value="full" /><param
name="blockSize" value="256" /><param
name="itemsPerSlot" value="512" />
@@ -39,7 +39,7 @@
<output name="out_file1"
file="7.bigbed"/></test><test>
- <param name="input1" value="7.bed" dbkey="hg18"
/>
+ <param name="input1" value="7.bed" dbkey="hg17"
/><param name="settingsType" value="preset" /><output
name="out_file1" file="7.bigbed"/></test>
Repository URL:
https://bitbucket.org/galaxy/galaxy-central/
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