1 new changeset in galaxy-central:

http://bitbucket.org/galaxy/galaxy-central/changeset/1a544e327b3d/ changeset: r5121:1a544e327b3d user: kanwei date: 2011-02-24 21:23:21 summary: Fix bed_to_bigBed test affected #: 2 files (18 bytes)

--- a/buildbot_setup.sh Thu Feb 24 15:07:46 2011 -0500 +++ b/buildbot_setup.sh Thu Feb 24 15:23:21 2011 -0500 @@ -109,7 +109,7 @@ fi done

-# for wig_to_bigWig +# for wig_to_bigWig and bed_to_bigBed if [ ! -f "tool-data/shared/ucsc/chrom/hg17.len" -a -f "test-data/wig_to_bigwig_hg17.len" ]; then mkdir -p tool-data/shared/ucsc/chrom cp test-data/wig_to_bigwig_hg17.len tool-data/shared/ucsc/chrom/hg17.len

--- a/tools/filters/bed_to_bigbed.xml Thu Feb 24 15:07:46 2011 -0500 +++ b/tools/filters/bed_to_bigbed.xml Thu Feb 24 15:23:21 2011 -0500 @@ -31,7 +31,7 @@ </outputs><tests><test> - <param name="input1" value="7.bed" dbkey="hg18" /> + <param name="input1" value="7.bed" dbkey="hg17" /><param name="settingsType" value="full" /><param name="blockSize" value="256" /><param name="itemsPerSlot" value="512" /> @@ -39,7 +39,7 @@ <output name="out_file1" file="7.bigbed"/></test><test> - <param name="input1" value="7.bed" dbkey="hg18" /> + <param name="input1" value="7.bed" dbkey="hg17" /><param name="settingsType" value="preset" /><output name="out_file1" file="7.bigbed"/></test>

Repository URL: https://bitbucket.org/galaxy/galaxy-central/

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