# HG changeset patch -- Bitbucket.org # Project galaxy-dist # URL http://bitbucket.org/galaxy/galaxy-dist/overview # User James Taylor <james@jamestaylor.org> # Date 1278616898 14400 # Node ID c164c2fb3a6516f8a086956a118145ae4aa1093f # Parent cd941e492bc0bc6930b8ac32190459d9d536078b Update tool data table config file --- a/tool_data_table_conf.xml.sample +++ b/tool_data_table_conf.xml.sample @@ -1,6 +1,17 @@ <tables> + <!-- Locations of MAF files that have been indexed with bx-python --><table name="indexed_maf_files"> - <column_names>name, value, dbkey, species</column_names> - <file name="tool-data/maf_index.loc" /> + <columns>name, value, dbkey, species</columns> + <file path="tool-data/maf_index.loc" /> + </table> + <!-- Locations of indexes in the BWA mapper format --> + <table name="bwa_indexes"> + <columns>name, value</columns> + <file path="tool-data/bwa_index.loc" /> + </table> + <!-- Locations of indexes in the Bowtie mapper format --> + <table name="bowtie_indexes"> + <columns>name, value</columns> + <file path="tool-data/bowtie_indices.loc" /></table></tables>