Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 96bd4552e1b1a7b18d57f8e0d0f1a5da22b085a1 https://github.com/galaxyproject/galaxy/commit/96bd4552e1b1a7b18d57f8e0d0f1a... Author: John Chilton <jmchilton@gmail.com> Date: 2016-12-11 (Sun, 11 Dec 2016) Changed paths: M lib/galaxy/datatypes/genetics.py M lib/galaxy/datatypes/sniff.py Log Message: ----------- Further tighten up GG format. I encountered similar input problems to #864 - this helps a little. - Ensure first column is a valid marker as outlined on https://genome.ucsc.edu/goldenpath/help/hgGenomeHelp.html. - Avoid readlines() since it may allocate huge amounts on memory on certain inputs. - Eliminate bare exception. Rebased with bug fixes in original commit and better testing and tighter exception handling as suggested by @nsoranzo. Commit: 176d4d5cf49a5859357ba88f38ef6a2136fb8570 https://github.com/galaxyproject/galaxy/commit/176d4d5cf49a5859357ba88f38ef6... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2016-12-12 (Mon, 12 Dec 2016) Changed paths: M lib/galaxy/datatypes/genetics.py M lib/galaxy/datatypes/sniff.py Log Message: ----------- Merge pull request #3233 from jmchilton/gg_datatype Further tighten up GG format. Compare: https://github.com/galaxyproject/galaxy/compare/e6374bfc211f...176d4d5cf49a