Branch: refs/heads/release_15.10 Home: https://github.com/galaxyproject/galaxy Commit: c9abc2bc97dbdbe85c82946ca1138a6f6139bb33 https://github.com/galaxyproject/galaxy/commit/c9abc2bc97dbdbe85c82946ca1138... Author: Nicola Soranzo <nicola.soranzo@tgac.ac.uk> Date: 2015-12-03 (Thu, 03 Dec 2015) Changed paths: M test/tool_shed/test_data/1440_files/complex_dependency/tool_dependencies.xml Log Message: ----------- Fix for test/tool_shed/functional/test_1440_missing_env_sh_files.py . Properly order the installation of the repositories adding prior_installation_required="True". Otherwise filter_1440 is installed first and ends in INSTALLED status because of the logic of Repository.create_tool_dependency_with_initialized_env_sh_file() method contained in lib/tool_shed/galaxy_install/tool_dependencies/recipe/tag_handler.py . Commit: 2b697e3c1ae76e4c718ed558e88a3c387d6e35c9 https://github.com/galaxyproject/galaxy/commit/2b697e3c1ae76e4c718ed558e88a3... Author: Nicola Soranzo <nicola.soranzo@tgac.ac.uk> Date: 2015-12-03 (Thu, 03 Dec 2015) Changed paths: M lib/galaxy/webapps/galaxy/controllers/admin_toolshed.py Log Message: ----------- Fix detection of missing repository dependencies when reinstalling an updated Tool Shed repository. Fix test/tool_shed/functional/test_1087_install_updated_repository_dependencies.py . Commit: 516b079ab97d7fc0a40255d03dcaf2cb600a2384 https://github.com/galaxyproject/galaxy/commit/516b079ab97d7fc0a40255d03dcaf... Author: John Chilton <jmchilton@gmail.com> Date: 2015-12-03 (Thu, 03 Dec 2015) Changed paths: M lib/galaxy/webapps/galaxy/controllers/admin_toolshed.py M test/tool_shed/test_data/1440_files/complex_dependency/tool_dependencies.xml Log Message: ----------- Merge pull request #1222 from nsoranzo/release_15.10_tool_shed_fixes [15.10] Tool Shed fixes. Compare: https://github.com/galaxyproject/galaxy/compare/d1684e7c9d9d...516b079ab97d