1 new commit in galaxy-central:

https://bitbucket.org/galaxy/galaxy-central/commits/95a7a6be8791/ Changeset: 95a7a6be8791 User: jgoecks Date: 2013-11-19 20:23:32 Summary: Make viz_filter_cols metadata attribute optional. Affected #: 2 files

diff -r 5ebf2d14c2eea6bd8425e22ded37b7346b65c282 -r 95a7a6be8791721f97f33f56e4c5bb56787ec181 lib/galaxy/datatypes/interval.py --- a/lib/galaxy/datatypes/interval.py +++ b/lib/galaxy/datatypes/interval.py @@ -389,7 +389,7 @@ MetadataElement( name="endCol", default=3, desc="End column", param=metadata.ColumnParameter ) MetadataElement( name="strandCol", desc="Strand column (click box & select)", param=metadata.ColumnParameter, optional=True, no_value=0 ) MetadataElement( name="columns", default=3, desc="Number of columns", readonly=True, visible=False ) - MetadataElement( name="viz_filter_cols", desc="Score column for visualization", default=[4], param=metadata.ColumnParameter, multiple=True ) + MetadataElement( name="viz_filter_cols", desc="Score column for visualization", default=[4], param=metadata.ColumnParameter, optional=True, multiple=True ) ###do we need to repeat these? they are the same as should be inherited from interval type

def set_meta( self, dataset, overwrite = True, **kwd ):

diff -r 5ebf2d14c2eea6bd8425e22ded37b7346b65c282 -r 95a7a6be8791721f97f33f56e4c5bb56787ec181 lib/galaxy/datatypes/tabular.py --- a/lib/galaxy/datatypes/tabular.py +++ b/lib/galaxy/datatypes/tabular.py @@ -652,7 +652,7 @@

MetadataElement( name="columns", default=10, desc="Number of columns", readonly=True, visible=False ) MetadataElement( name="column_types", default=['str','int','str','str','str','int','str','list','str','str'], param=metadata.ColumnTypesParameter, desc="Column types", readonly=True, visible=False ) - MetadataElement( name="viz_filter_cols", desc="Score column for visualization", default=[5], param=metadata.ColumnParameter, multiple=True, visible=False ) + MetadataElement( name="viz_filter_cols", desc="Score column for visualization", default=[5], param=metadata.ColumnParameter, optional=True, multiple=True, visible=False ) MetadataElement( name="sample_names", default=[], desc="Sample names", readonly=True, visible=False, optional=True, no_value=[] )

def sniff( self, filename ):

Repository URL: https://bitbucket.org/galaxy/galaxy-central/

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