Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: eb29adc2efd8bad0f15dc6a51b2a3cd33216b8f9 https://github.com/galaxyproject/galaxy/commit/eb29adc2efd8bad0f15dc6a51b2a3... Author: Nate Coraor <nate@bx.psu.edu> Date: 2018-05-03 (Thu, 03 May 2018) Changed paths: M lib/galaxy/dependencies/pipfiles/default/Pipfile M lib/galaxy/dependencies/pipfiles/default/pinned-requirements.txt Log Message: ----------- Downgrade python-genomespaceclient to 0.2 Commit: eae69c26f89aa6b809a3186131f59b32d590bb9e https://github.com/galaxyproject/galaxy/commit/eae69c26f89aa6b809a3186131f59... Author: John Chilton <jmchilton@gmail.com> Date: 2018-05-09 (Wed, 09 May 2018) Changed paths: M run_tests.sh Log Message: ----------- [18.05] Fix parsing last argument when running functional tests. Causes Planemo to double test tools. Commit: 9bc73824a5419072b65158a09c0f6c30a9c5b3f0 https://github.com/galaxyproject/galaxy/commit/9bc73824a5419072b65158a09c0f6... Author: John Chilton <jmchilton@gmail.com> Date: 2018-05-10 (Thu, 10 May 2018) Changed paths: M config/datatypes_conf.xml.sample M lib/galaxy/datatypes/binary.py M lib/galaxy/datatypes/registry.py M lib/galaxy/datatypes/sniff.py A test/unit/datatypes/test_datatypes_registry.py Log Message: ----------- [18.05] Fix matches_any() checks for dynamic compressed types. See huge conversation on #6093. Commit: ba1f369e2f1c124ffacd60b329364d79d63ed513 https://github.com/galaxyproject/galaxy/commit/ba1f369e2f1c124ffacd60b329364... Author: guerler <aysam.guerler@gmail.com> Date: 2018-05-10 (Thu, 10 May 2018) Changed paths: M lib/galaxy/web/base/controller.py Log Message: ----------- Encode dataset ids when loading trackster visualizations Commit: b7f26be45fd0fa13876cfdfdd37c460b9947474b https://github.com/galaxyproject/galaxy/commit/b7f26be45fd0fa13876cfdfdd37c4... Author: Nicola Soranzo <nsoranzo@tiscali.it> Date: 2018-05-10 (Thu, 10 May 2018) Changed paths: M run_tests.sh Log Message: ----------- Merge pull request #6095 from jmchilton/fix_double_test [18.05] Fix parsing last argument when running functional tests. Commit: b6a22584aaed8df8ea3ffc1d1db96c65fe887878 https://github.com/galaxyproject/galaxy/commit/b6a22584aaed8df8ea3ffc1d1db96... Author: Dannon <dannon.baker@gmail.com> Date: 2018-05-10 (Thu, 10 May 2018) Changed paths: M lib/galaxy/web/base/controller.py Log Message: ----------- Merge pull request #6112 from guerler/fix_hda_access [18.05] Encode dataset ids when loading trackster visualizations Commit: 148d56a9c9d12df6d3d8fbe48a713f75cca6a468 https://github.com/galaxyproject/galaxy/commit/148d56a9c9d12df6d3d8fbe48a713... Author: John Chilton <jmchilton@gmail.com> Date: 2018-05-10 (Thu, 10 May 2018) Changed paths: M test/unit/datatypes/test_datatypes_registry.py Log Message: ----------- Many more matches_any tests, better categorization of them with comments. Some of these suggested by @nsoranzo. Commit: 8ca8ead4e592beb73ab92fa1324ee2060beb9188 https://github.com/galaxyproject/galaxy/commit/8ca8ead4e592beb73ab92fa1324ee... Author: Nicola Soranzo <nsoranzo@tiscali.it> Date: 2018-05-10 (Thu, 10 May 2018) Changed paths: M config/datatypes_conf.xml.sample M lib/galaxy/datatypes/binary.py M lib/galaxy/datatypes/registry.py M lib/galaxy/datatypes/sniff.py A test/unit/datatypes/test_datatypes_registry.py Log Message: ----------- Merge pull request #6111 from jmchilton/dynamic_compressed_types_fix_4 [18.05] Fix matches_any() checks for dynamic compressed types. Commit: efc97a440096372d01427942cb19ac82a0d23dd3 https://github.com/galaxyproject/galaxy/commit/efc97a440096372d01427942cb19a... Author: Dannon <dannon.baker@gmail.com> Date: 2018-05-10 (Thu, 10 May 2018) Changed paths: M lib/galaxy/dependencies/pipfiles/default/Pipfile M lib/galaxy/dependencies/pipfiles/default/pinned-requirements.txt Log Message: ----------- Merge pull request #6054 from natefoo/genomespaceclient-downgrade [18.05] Downgrade python-genomespaceclient to 0.2 Commit: 4dedc900b56573a5bc0443daca096afa66da072b https://github.com/galaxyproject/galaxy/commit/4dedc900b56573a5bc0443daca096... Author: Helena Rasche <hxr@hx42.org> Date: 2018-05-11 (Fri, 11 May 2018) Changed paths: M lib/galaxy/webapps/galaxy/api/library_datasets.py Log Message: ----------- Showed up in esntry as referencing fname before assignment Commit: 890b446974b03daa098130392ee538a1320daa16 https://github.com/galaxyproject/galaxy/commit/890b446974b03daa098130392ee53... Author: Dannon <dannon.baker@gmail.com> Date: 2018-05-11 (Fri, 11 May 2018) Changed paths: M lib/galaxy/webapps/galaxy/api/library_datasets.py Log Message: ----------- Merge pull request #6119 from erasche/error-temp-lib-dl [18.01] Showed up in sentry as referencing fname before assignment Commit: e26691244fc28d15f7ddd8e8913508fba3786b1c https://github.com/galaxyproject/galaxy/commit/e26691244fc28d15f7ddd8e891350... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-05-11 (Fri, 11 May 2018) Changed paths: M lib/galaxy/webapps/galaxy/api/library_datasets.py Log Message: ----------- Merge remote-tracking branch 'upstream/release_18.01' into release_18.05 Commit: 02e8cb65a0b4aabc6ad6f29fca2d99dd2cbe08d0 https://github.com/galaxyproject/galaxy/commit/02e8cb65a0b4aabc6ad6f29fca2d9... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-05-11 (Fri, 11 May 2018) Changed paths: M config/datatypes_conf.xml.sample M lib/galaxy/datatypes/binary.py M lib/galaxy/datatypes/registry.py M lib/galaxy/datatypes/sniff.py M lib/galaxy/dependencies/pipfiles/default/Pipfile M lib/galaxy/dependencies/pipfiles/default/pinned-requirements.txt M lib/galaxy/web/base/controller.py M lib/galaxy/webapps/galaxy/api/library_datasets.py M run_tests.sh A test/unit/datatypes/test_datatypes_registry.py Log Message: ----------- Merge remote-tracking branch 'upstream/release_18.05' into dev Compare: https://github.com/galaxyproject/galaxy/compare/f69760d66a46...02e8cb65a0b4 **NOTE:** This service been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.