Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: d3ae7351f734b4e841c91495c1e41c77fe4e01b1 https://github.com/galaxyproject/galaxy/commit/d3ae7351f734b4e841c91495c1e41... Author: Nicola Soranzo nicola.soranzo@earlham.ac.uk Date: 2017-08-22 (Tue, 22 Aug 2017)
Changed paths: M lib/galaxy/tools/verify/__init__.py
Log Message: ----------- Use pysam instead of samtools binary
This will make it possible to remove the requirement of having `samtools` installed when testing tools, e.g. in the tools-iuc TravisCI setup: https://github.com/galaxyproject/tools-iuc/blob/master/.travis.yml#L59
Commit: 001d94ae4ea0af1ed16c809a6e8e26c356549396 https://github.com/galaxyproject/galaxy/commit/001d94ae4ea0af1ed16c809a6e8e2... Author: Dannon Baker dannon.baker@gmail.com Date: 2017-08-24 (Thu, 24 Aug 2017)
Changed paths: M lib/galaxy/tools/verify/__init__.py
Log Message: ----------- Merge pull request #4479 from nsoranzo/use_pysam_in_verify
Use pysam instead of samtools binary
Compare: https://github.com/galaxyproject/galaxy/compare/a83438159c2a...001d94ae4ea0
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