1 new commit in galaxy-central: https://bitbucket.org/galaxy/galaxy-central/changeset/a77cd7bbe375/ changeset: a77cd7bbe375 user: dan date: 2011-11-08 22:53:19 summary: Update FASTQ Groomer tool help to indicate that Illumina 1.8+ is Sanger encoded. affected #: 1 file diff -r bc399a95e31ea30ef80893b3bc318f45cda3241a -r a77cd7bbe375eb7884cfa5ff38d078033f89c1ab tools/fastq/fastq_groomer.xml --- a/tools/fastq/fastq_groomer.xml +++ b/tools/fastq/fastq_groomer.xml @@ -16,7 +16,7 @@ <param name="input_file" type="data" format="fastq" label="File to groom" /><param name="input_type" type="select" label="Input FASTQ quality scores type"><option value="solexa">Solexa</option> - <option value="illumina">Illumina 1.3+</option> + <option value="illumina">Illumina 1.3-1.7</option><option value="sanger" selected="True">Sanger</option><option value="cssanger">Color Space Sanger</option></param> @@ -358,6 +358,10 @@ Diagram adapted from http://en.wikipedia.org/wiki/FASTQ_format +.. class:: infomark + +Output from Illumina 1.8+ pipelines are Sanger encoded. + ------ **Citation** Repository URL: https://bitbucket.org/galaxy/galaxy-central/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.