Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 61f64e828530c54bae6a090580a6e4278b32a699 https://github.com/galaxyproject/galaxy/commit/61f64e828530c54bae6a090580a6e... Author: John Chilton <jmchilton@gmail.com> Date: 2015-12-16 (Wed, 16 Dec 2015) Changed paths: M lib/galaxy/tools/__init__.py M lib/galaxy/tools/actions/__init__.py M lib/galaxy/tools/execute.py M lib/galaxy/tools/parser/__init__.py M lib/galaxy/tools/parser/output_actions.py A lib/galaxy/tools/parser/output_objects.py M lib/galaxy/tools/parser/xml.py M lib/galaxy/tools/parser/yaml.py M lib/galaxy/workflow/extract.py M test/unit/tools/test_actions.py M test/unit/tools/test_evaluation.py Log Message: ----------- Refactor tool output classes out of galaxy.tools and into parser module. This makes the galaxy.tool.parser much more portable, it no longer has a dependency on anything in galaxy.tools or submodules except galaxy.tools.loader (which in turn has no dependencies on galaxy.tools or submodules). Commit: 455372e6bf711d64947768f8b05418f8e6b49647 https://github.com/galaxyproject/galaxy/commit/455372e6bf711d64947768f8b0541... Author: Björn Grüning <bjoern@gruenings.eu> Date: 2015-12-18 (Fri, 18 Dec 2015) Changed paths: M lib/galaxy/tools/__init__.py M lib/galaxy/tools/actions/__init__.py M lib/galaxy/tools/execute.py M lib/galaxy/tools/parser/__init__.py M lib/galaxy/tools/parser/output_actions.py A lib/galaxy/tools/parser/output_objects.py M lib/galaxy/tools/parser/xml.py M lib/galaxy/tools/parser/yaml.py M lib/galaxy/workflow/extract.py M test/unit/tools/test_actions.py M test/unit/tools/test_evaluation.py Log Message: ----------- Merge pull request #1353 from jmchilton/output_refactor Refactor tool output classes out of galaxy.tools and into parser module. Compare: https://github.com/galaxyproject/galaxy/compare/80a35c218416...455372e6bf71