1 new commit in galaxy-central: https://bitbucket.org/galaxy/galaxy-central/commits/9fd3b0fc3a70/ Changeset: 9fd3b0fc3a70 User: davebgx Date: 2014-03-14 21:27:57 Summary: Fix misquoted command for tool dependency environment variable inheritance. Affected #: 1 file diff -r 61a423fddc6b82f9bc626318fddbf5c31a967c90 -r 9fd3b0fc3a70b40d8f35e72c4ef2513fdb03a852 lib/tool_shed/galaxy_install/tool_dependencies/fabric_util.py --- a/lib/tool_shed/galaxy_install/tool_dependencies/fabric_util.py +++ b/lib/tool_shed/galaxy_install/tool_dependencies/fabric_util.py @@ -462,7 +462,7 @@ inherited_env_var_name = env_var_value.split( '[' )[1].split( ']' )[0] to_replace = '$ENV[%s]' % inherited_env_var_name # Build a command line that outputs VARIABLE_NAME: <the value of the variable>. - set_prior_environment_commands.append( 'echo "%s: $%s"' % ( inherited_env_var_name, inherited_env_var_name ) ) + set_prior_environment_commands.append( 'echo %s: $%s' % ( inherited_env_var_name, inherited_env_var_name ) ) command = ' ; '.join( set_prior_environment_commands ) # Run the command and capture the output. command_return = handle_command( app, tool_dependency, install_dir, command, return_output=True ) Repository URL: https://bitbucket.org/galaxy/galaxy-central/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.