1 new commit in galaxy-central:

https://bitbucket.org/galaxy/galaxy-central/commits/b801d178c90c/ Changeset: b801d178c90c User: carlfeberhard Date: 2014-04-23 17:59:21 Summary: Visualization framework: remove deprecated 'template_root' element left from when visualizations were loaded from galaxy's template directory Affected #: 5 files

diff -r 1d1292f5b4ab6da6863f845ec538389c1e8659a9 -r b801d178c90c0ca22d4fe9c219af7f9ae603b8c9 config/plugins/visualizations/circster/config/circster.xml --- a/config/plugins/visualizations/circster/config/circster.xml +++ b/config/plugins/visualizations/circster/config/circster.xml @@ -21,8 +21,6 @@ <param_modifier type="string" modifies="dataset_id">hda_ldda</param_modifier><param type="dbkey">dbkey</param></params> - <!-- template_root and template are currently ignored for the 'built-in' visualizations --> - <template_root>webapps/galaxy/visualization</template_root><template>circster.mako</template><render_target>_top</render_target></visualization>

diff -r 1d1292f5b4ab6da6863f845ec538389c1e8659a9 -r b801d178c90c0ca22d4fe9c219af7f9ae603b8c9 config/plugins/visualizations/phyloviz/config/phyloviz.xml --- a/config/plugins/visualizations/phyloviz/config/phyloviz.xml +++ b/config/plugins/visualizations/phyloviz/config/phyloviz.xml @@ -14,8 +14,6 @@ <param type="dataset" var_name_in_template="hda" required="true">dataset_id</param><param type="integer" default="0">tree_index</param></params> - <!-- template_root and template are currently ignored for the 'built-in' visualizations --> - <template_root>webapps/galaxy/visualization</template_root><template>phyloviz.mako</template><render_target>_top</render_target></visualization>

diff -r 1d1292f5b4ab6da6863f845ec538389c1e8659a9 -r b801d178c90c0ca22d4fe9c219af7f9ae603b8c9 config/plugins/visualizations/sweepster/config/sweepster.xml --- a/config/plugins/visualizations/sweepster/config/sweepster.xml +++ b/config/plugins/visualizations/sweepster/config/sweepster.xml @@ -20,8 +20,6 @@ <param type="hda_or_ldda" var_name_in_template="dataset">dataset_id</param><param_modifier type="string" modifies="dataset_id">hda_ldda</param_modifier></params> - <!-- template_root and template are currently ignored for the 'built-in' visualizations --> - <template_root>webapps/galaxy/visualization</template_root><template>sweepster.mako</template><render_target>_top</render_target></visualization>

diff -r 1d1292f5b4ab6da6863f845ec538389c1e8659a9 -r b801d178c90c0ca22d4fe9c219af7f9ae603b8c9 config/plugins/visualizations/trackster/config/trackster.xml --- a/config/plugins/visualizations/trackster/config/trackster.xml +++ b/config/plugins/visualizations/trackster/config/trackster.xml @@ -23,8 +23,6 @@ <param type="genome_region">genome_region</param><param type="dbkey">dbkey</param></params> - <!-- template_root and template are currently ignored for the 'built-in' visualizations --> - <template_root>webapps/galaxy/visualization/tracks</template_root><template>browser.mako</template><render_target>_top</render_target></visualization>

diff -r 1d1292f5b4ab6da6863f845ec538389c1e8659a9 -r b801d178c90c0ca22d4fe9c219af7f9ae603b8c9 config/plugins/visualizations/visualization.dtd --- a/config/plugins/visualizations/visualization.dtd +++ b/config/plugins/visualizations/visualization.dtd @@ -126,10 +126,6 @@ var_name_in_template CDATA #IMPLIED

-<!-- template_root: the directory to search for the template relative to templates/webapps/galaxy - (optional) DEFAULT: visualizations ---> -<!ELEMENT template_root (#PCDATA)><!-- template: the template used to render the visualization. REQUIRED --><!ELEMENT template (#PCDATA)><!-- render_target: used as the target attribute of the link to the visualization.

Repository URL: https://bitbucket.org/galaxy/galaxy-central/

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