[galaxyproject/galaxy] 930c37: Style fixes
Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 930c37ffb10bf36d2e95cee34da35997cdf59d8d https://github.com/galaxyproject/galaxy/commit/930c37ffb10bf36d2e95cee34da35... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/app.js M config/plugins/visualizations/charts/static/library/datasets.js M config/plugins/visualizations/charts/static/library/jobs.js M config/plugins/visualizations/charts/static/library/storage.js M config/plugins/visualizations/charts/static/models/chart.js M config/plugins/visualizations/charts/static/models/config.js M config/plugins/visualizations/charts/static/models/group.js M config/plugins/visualizations/charts/static/models/groups.js M config/plugins/visualizations/charts/static/views/viewer.js M config/plugins/visualizations/charts/static/views/viewport.js Log Message: ----------- Style fixes Commit: 4dd33fecb7b7643e7a4e14440a56187b790219a0 https://github.com/galaxyproject/galaxy/commit/4dd33fecb7b7643e7a4e14440a561... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/views/editor.js M config/plugins/visualizations/charts/static/views/viewport.js Log Message: ----------- Align editor view style Commit: 0861bb5b946bef5f5b7bb3d6c40670ec4eb1661d https://github.com/galaxyproject/galaxy/commit/0861bb5b946bef5f5b7bb3d6c4067... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/views/editor.js Log Message: ----------- Fix spacing Commit: b6914479fba31057c064fcdcfc48060760d15400 https://github.com/galaxyproject/galaxy/commit/b6914479fba31057c064fcdcfc480... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/views/group.js Log Message: ----------- Align group view coding style Commit: 58a237eb4597cd709f8dbd0dcf6143f0adebc7f7 https://github.com/galaxyproject/galaxy/commit/58a237eb4597cd709f8dbd0dcf614... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/views/group.js Log Message: ----------- Adjust group view coding styles Commit: d38a4a4f6b193aa4aae84d200cdf77916aee9038 https://github.com/galaxyproject/galaxy/commit/d38a4a4f6b193aa4aae84d200cdf7... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/views/settings.js M config/plugins/visualizations/charts/static/views/types.js Log Message: ----------- Align remaining view code styles Commit: c6e9a56a46e97c7991eb3b67084c60d0d839f81e https://github.com/galaxyproject/galaxy/commit/c6e9a56a46e97c7991eb3b67084c6... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/app.js M config/plugins/visualizations/charts/static/models/chart.js M config/plugins/visualizations/charts/static/views/editor.js M config/plugins/visualizations/charts/static/views/group.js M config/plugins/visualizations/charts/static/views/settings.js M config/plugins/visualizations/charts/static/views/types.js M config/plugins/visualizations/charts/static/views/viewport.js Log Message: ----------- Adjust viewport styles Commit: ad9f8b139d77575281900997039cc3bba3d00eb5 https://github.com/galaxyproject/galaxy/commit/ad9f8b139d77575281900997039cc... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M client/galaxy/scripts/mvc/form/form-parameters.js M client/galaxy/scripts/mvc/form/form-section.js M config/plugins/visualizations/charts/static/library/ui-table-form.js M static/maps/mvc/form/form-parameters.js.map M static/maps/mvc/form/form-section.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/form/form-parameters.js M static/scripts/mvc/form/form-section.js Log Message: ----------- Decouple change handler for input parameters Commit: a8da228c8fddcff29c73c0900574e74290166359 https://github.com/galaxyproject/galaxy/commit/a8da228c8fddcff29c73c0900574e... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M client/galaxy/scripts/mvc/form/form-parameters.js M client/galaxy/scripts/mvc/ui/ui-select-default.js M config/plugins/visualizations/charts/static/charts/forms/default.js M config/plugins/visualizations/charts/static/charts/jqplot/common/config.js M config/plugins/visualizations/charts/static/charts/nvd3/pie/config.js M config/plugins/visualizations/charts/static/library/ui-table-form.js M static/maps/mvc/form/form-parameters.js.map M static/maps/mvc/ui/ui-select-default.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/form/form-parameters.js M static/scripts/mvc/ui/ui-select-default.js Log Message: ----------- Use common parameter factory for charts Commit: 0486ea4cc6aee83ea3d57f5fff0bf75b562410e2 https://github.com/galaxyproject/galaxy/commit/0486ea4cc6aee83ea3d57f5fff0bf... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/library/ui-table-form.js Log Message: ----------- Fadein additional options Commit: ef029042fd30c46b02e423b00f80cfb8dbf38e49 https://github.com/galaxyproject/galaxy/commit/ef029042fd30c46b02e423b00f80c... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: R config/plugins/visualizations/charts/static/library/ui-table-form.js M config/plugins/visualizations/charts/static/views/settings.js Log Message: ----------- Combine ui-table-form and settings view Commit: 08b8cd6f00aed9554256ecf2c7eafd2e4f99ce99 https://github.com/galaxyproject/galaxy/commit/08b8cd6f00aed9554256ecf2c7eaf... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/views/settings.js Log Message: ----------- Remove unused rendering options for settings view Commit: ce131d8b51dec8bb99571a524dc4c4f045e675d7 https://github.com/galaxyproject/galaxy/commit/ce131d8b51dec8bb99571a524dc4c... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/plugins/nvd3/nv.d3.css Log Message: ----------- Fix font size change caused by report styles Commit: 39c544c7742c9cc7853a9bbeac1d43c564b43e7b https://github.com/galaxyproject/galaxy/commit/39c544c7742c9cc7853a9bbeac1d4... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/library/storage.js Log Message: ----------- Show error message if saving fails Commit: 806019bb95844569c611618e177d974bd673332e https://github.com/galaxyproject/galaxy/commit/806019bb95844569c611618e177d9... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/app.js M config/plugins/visualizations/charts/static/library/storage.js Log Message: ----------- Add reusable modal show to app Commit: ca4b444af481bbdbdcd495ad3a397d4e0d1812d0 https://github.com/galaxyproject/galaxy/commit/ca4b444af481bbdbdcd495ad3a397... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/views/viewport.js Log Message: ----------- Fix state information rendering Commit: 9f7c392239885c9ba8fdc43e7ba3e2d4d90dc2cc https://github.com/galaxyproject/galaxy/commit/9f7c392239885c9ba8fdc43e7ba3e... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/views/editor.js Log Message: ----------- Revise to 3-tab mode Commit: 645727c7a520a25b2459155604ff05eb533de4dd https://github.com/galaxyproject/galaxy/commit/645727c7a520a25b2459155604ff0... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/views/editor.js Log Message: ----------- Fix margin Commit: 539eeef5123f4adac296806ac4faf6931b24bb3c https://github.com/galaxyproject/galaxy/commit/539eeef5123f4adac296806ac4faf... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/views/editor.js Log Message: ----------- Use large margin Commit: 916d2d01f788f32f126dd31ad4cf8fca1f99af85 https://github.com/galaxyproject/galaxy/commit/916d2d01f788f32f126dd31ad4cf8... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M client/galaxy/scripts/mvc/ui/ui-tabs.js M config/plugins/visualizations/charts/static/views/editor.js M static/maps/mvc/ui/ui-tabs.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/ui/ui-tabs.js Log Message: ----------- Refactor ui-tabs view Commit: b59cf74589e98c0666e1202750611a610e49826a https://github.com/galaxyproject/galaxy/commit/b59cf74589e98c0666e1202750611... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M client/galaxy/scripts/mvc/ui/ui-tabs.js M config/plugins/visualizations/charts/static/views/editor.js M static/maps/mvc/ui/ui-tabs.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/ui/ui-tabs.js Log Message: ----------- Add tab tooltips Commit: 78432f7d88f60564c4415253b0886fc05590e8b0 https://github.com/galaxyproject/galaxy/commit/78432f7d88f60564c4415253b0886... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M client/galaxy/scripts/mvc/form/form-repeat.js R config/plugins/visualizations/charts/static/views/group.js A config/plugins/visualizations/charts/static/views/groups.js M config/plugins/visualizations/charts/static/views/settings.js M static/maps/mvc/form/form-repeat.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/form/form-repeat.js Log Message: ----------- Add repeat style view for data groups Commit: e2ebcd40e5d1a4bee009bd647bad40698dedecd5 https://github.com/galaxyproject/galaxy/commit/e2ebcd40e5d1a4bee009bd647bad4... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M static/maps/mvc/ui/ui-tabs.js.map M static/scripts/mvc/ui/ui-tabs.js Log Message: ----------- Insert tab icons Commit: 3ca50a6b237b77cda3f7dba9acd6c151b4893b80 https://github.com/galaxyproject/galaxy/commit/3ca50a6b237b77cda3f7dba9acd6c... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M client/galaxy/scripts/mvc/ui/ui-tabs.js M config/plugins/visualizations/charts/static/views/editor.js M static/maps/mvc/ui/ui-tabs.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/ui/ui-tabs.js Log Message: ----------- Insert tab icons Commit: e10d63cee00018ebf176976b6af4899634e87103 https://github.com/galaxyproject/galaxy/commit/e10d63cee00018ebf176976b6af48... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/views/groups.js Log Message: ----------- Fix margin within data group repeat blocks Commit: 3d8840b86d5640ba74c80a1b9104eb768d6717f6 https://github.com/galaxyproject/galaxy/commit/3d8840b86d5640ba74c80a1b9104e... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M client/galaxy/scripts/mvc/form/form-repeat.js M client/galaxy/style/less/ui.less M config/plugins/visualizations/charts/static/views/groups.js M static/maps/mvc/form/form-repeat.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/form/form-repeat.js M static/style/blue/base.css Log Message: ----------- Revise group repeat block background and border colors Commit: 3ae19661f929de5278008d6cb9a07dde00ad7a80 https://github.com/galaxyproject/galaxy/commit/3ae19661f929de5278008d6cb9a07... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M client/galaxy/scripts/mvc/ui/ui-tabs.js M client/galaxy/style/less/ui.less M static/maps/mvc/ui/ui-tabs.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/ui/ui-tabs.js M static/style/blue/base.css Log Message: ----------- Use classes instead of fixed ids to tag ui-tab dom elements Commit: 13b599158d2cbe80b8e1ddbff8ecdc1d14d3a4d0 https://github.com/galaxyproject/galaxy/commit/13b599158d2cbe80b8e1ddbff8ecd... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-22 (Wed, 22 Jun 2016) Changed paths: M client/galaxy/scripts/mvc/ui/ui-misc.js M static/maps/mvc/ui/ui-misc.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/ui/ui-misc.js Log Message: ----------- Allow displaying same message multiple times Commit: c2c6318061e1ad25513930ffc63f362fd36c5593 https://github.com/galaxyproject/galaxy/commit/c2c6318061e1ad25513930ffc63f3... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-23 (Thu, 23 Jun 2016) Changed paths: M client/galaxy/scripts/mvc/form/form-parameters.js M static/maps/mvc/form/form-parameters.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/form/form-parameters.js Log Message: ----------- Fix option format identification Commit: 43a55e8628e6b9cb0b791173df42f199791e5655 https://github.com/galaxyproject/galaxy/commit/43a55e8628e6b9cb0b791173df42f... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-23 (Thu, 23 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/library/storage.js M config/plugins/visualizations/charts/static/models/chart.js R config/plugins/visualizations/charts/static/models/group.js R config/plugins/visualizations/charts/static/models/groups.js M config/plugins/visualizations/charts/static/views/editor.js M config/plugins/visualizations/charts/static/views/groups.js Log Message: ----------- Refactor individual model files, auto add first data series Commit: e25057c0d12e4570d53f4cb5eeed213e081b850a https://github.com/galaxyproject/galaxy/commit/e25057c0d12e4570d53f4cb5eeed2... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-23 (Thu, 23 Jun 2016) Changed paths: M client/galaxy/scripts/mvc/form/form-data.js M client/galaxy/style/less/ui.less M config/plugins/visualizations/charts/static/charts/forms/default.js M config/plugins/visualizations/charts/static/library/storage.js M config/plugins/visualizations/charts/static/views/editor.js M config/plugins/visualizations/charts/static/views/groups.js M static/maps/mvc/form/form-data.js.map M static/scripts/bundled/analysis.bundled.js M static/scripts/bundled/analysis.bundled.js.map M static/scripts/bundled/libs.bundled.js.map M static/scripts/mvc/form/form-data.js M static/style/blue/base.css Log Message: ----------- Use regular form view for groups Commit: 6ebc19aa2e4978d4bf151f5f994c54e37fa5dd25 https://github.com/galaxyproject/galaxy/commit/6ebc19aa2e4978d4bf151f5f994c5... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-23 (Thu, 23 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/app.css Log Message: ----------- Fix status margin Commit: fdf7a917c440087d206890e08b39608131ace241 https://github.com/galaxyproject/galaxy/commit/fdf7a917c440087d206890e08b396... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-23 (Thu, 23 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/models/config.js Log Message: ----------- Limit query size Commit: 2ee278a20fbedd6391c015b85689d834150a3a39 https://github.com/galaxyproject/galaxy/commit/2ee278a20fbedd6391c015b85689d... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-23 (Thu, 23 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/views/groups.js Log Message: ----------- Add semicolon Commit: f25e177fa55e456e0fd739f772e2a9dbc69304a0 https://github.com/galaxyproject/galaxy/commit/f25e177fa55e456e0fd739f772e2a... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-25 (Sat, 25 Jun 2016) Changed paths: M client/galaxy/scripts/mvc/form/form-view.js M config/plugins/visualizations/charts/static/charts/nvd3/common/config.js M config/plugins/visualizations/charts/static/charts/nvd3/common/wrapper.js M config/plugins/visualizations/charts/static/views/groups.js M config/plugins/visualizations/charts/static/views/viewport.js M static/maps/mvc/form/form-view.js.map M static/scripts/mvc/form/form-view.js Log Message: ----------- Series color Commit: 9e3a9212754da8407bf93a9078e5f61116660f38 https://github.com/galaxyproject/galaxy/commit/9e3a9212754da8407bf93a9078e5f... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-26 (Sun, 26 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/views/editor.js Log Message: ----------- Fix chart column validation Commit: 5c0a25498b6fa9b54539ba421fcceb634f75e411 https://github.com/galaxyproject/galaxy/commit/5c0a25498b6fa9b54539ba421fcce... Author: guerler <aysam.guerler@gmail.com> Date: 2016-06-26 (Sun, 26 Jun 2016) Changed paths: M config/plugins/visualizations/charts/static/views/groups.js Log Message: ----------- Relax column type matching condition Commit: d583d34d13d934230fd2645336df642b40dfb03e https://github.com/galaxyproject/galaxy/commit/d583d34d13d934230fd2645336df6... Author: guerler <aysam.guerler@gmail.com> Date: 2016-07-18 (Mon, 18 Jul 2016) Changed paths: M .ci/py3_sources.txt M Makefile M client/galaxy/scripts/mvc/collection/collection-li.js M client/galaxy/scripts/mvc/collection/collection-model.js M client/galaxy/scripts/mvc/collection/collection-view-edit.js M client/galaxy/scripts/mvc/collection/collection-view.js M client/galaxy/scripts/mvc/dataset/data.js M client/galaxy/scripts/mvc/history/hdca-li-edit.js M client/galaxy/scripts/mvc/history/hdca-li.js M client/galaxy/scripts/mvc/history/hdca-model.js M client/galaxy/scripts/mvc/history/history-contents.js M client/galaxy/scripts/mvc/tool/tool-form-composite.js M client/galaxy/scripts/viz/trackster/painters.js M client/galaxy/scripts/viz/trackster/tracks.js M config/datatypes_conf.xml.sample M config/galaxy.ini.sample M config/job_conf.xml.sample_advanced M config/plugins/interactive_environments/jupyter/config/jupyter.xml M config/plugins/visualizations/graphviz/config/graphviz.xml M config/plugins/visualizations/graphviz/static/js/graphVis.js M config/plugins/visualizations/graphviz/static/js/toolPanelFunctions.js M config/plugins/visualizations/graphviz/templates/graphviz.mako A display_applications/igv/bigwig.xml M lib/galaxy/config.py M lib/galaxy/dataset_collections/structure.py M lib/galaxy/datatypes/binary.py M lib/galaxy/datatypes/converters/bed_to_gff_converter.py M lib/galaxy/datatypes/converters/fastq_to_fqtoc.py M lib/galaxy/datatypes/converters/gff_to_bed_converter.py M lib/galaxy/datatypes/converters/interval_to_bed_converter.py M lib/galaxy/datatypes/converters/interval_to_bedstrict_converter.py M lib/galaxy/datatypes/converters/interval_to_coverage.py M lib/galaxy/datatypes/converters/lped_to_fped_converter.py M lib/galaxy/datatypes/converters/lped_to_pbed_converter.py M lib/galaxy/datatypes/converters/maf_to_fasta_converter.py M lib/galaxy/datatypes/converters/maf_to_interval_converter.py M lib/galaxy/datatypes/converters/pbed_ldreduced_converter.py M lib/galaxy/datatypes/converters/pbed_to_lped_converter.py M lib/galaxy/datatypes/converters/picard_interval_list_to_bed6_converter.py M lib/galaxy/datatypes/converters/ref_to_seq_taxonomy_converter.py M lib/galaxy/datatypes/converters/wiggle_to_simple_converter.py M lib/galaxy/datatypes/data.py M lib/galaxy/datatypes/dataproviders/column.py M lib/galaxy/datatypes/dataproviders/line.py M lib/galaxy/datatypes/molecules.py M lib/galaxy/datatypes/sequence.py M lib/galaxy/datatypes/sniff.py M lib/galaxy/datatypes/tabular.py M lib/galaxy/datatypes/text.py M lib/galaxy/datatypes/util/gff_util.py M lib/galaxy/jobs/runners/kubernetes.py M lib/galaxy/managers/base.py M lib/galaxy/managers/context.py M lib/galaxy/model/__init__.py M lib/galaxy/model/mapping.py M lib/galaxy/model/migrate/versions/0006_change_qual_datatype.py M lib/galaxy/model/migrate/versions/0007_sharing_histories.py M lib/galaxy/model/migrate/versions/0008_galaxy_forms.py M lib/galaxy/model/migrate/versions/0009_request_table.py M lib/galaxy/model/migrate/versions/0010_hda_display_at_authz_table.py M lib/galaxy/model/migrate/versions/0011_v0010_mysql_index_fix.py M lib/galaxy/model/migrate/versions/0012_user_address.py M lib/galaxy/model/migrate/versions/0013_change_lib_item_templates_to_forms.py M lib/galaxy/model/migrate/versions/0014_pages.py M lib/galaxy/model/migrate/versions/0015_tagging.py M lib/galaxy/model/migrate/versions/0016_v0015_mysql_index_fix.py M lib/galaxy/model/migrate/versions/0017_library_item_indexes.py M lib/galaxy/model/migrate/versions/0018_ordered_tags_and_page_tags.py M lib/galaxy/model/migrate/versions/0019_request_library_folder.py M lib/galaxy/model/migrate/versions/0020_library_upload_job.py M lib/galaxy/model/migrate/versions/0021_user_prefs.py M lib/galaxy/model/migrate/versions/0022_visualization_tables.py M 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scripts/cleanup_datasets/rename_purged_datasets.py M scripts/cleanup_datasets/update_dataset_size.py M scripts/cleanup_datasets/update_metadata.py M scripts/common_startup.sh M scripts/data_libraries/build_whoosh_index.py M scripts/db_shell.py M scripts/drmaa_external_runner.py M scripts/fetch_eggs.py M scripts/set_dataset_sizes.py M setup.cfg M static/maps/mvc/collection/collection-li.js.map M static/maps/mvc/collection/collection-model.js.map M static/maps/mvc/collection/collection-view-edit.js.map M static/maps/mvc/collection/collection-view.js.map M static/maps/mvc/dataset/data.js.map M static/maps/mvc/history/hdca-li-edit.js.map M static/maps/mvc/history/hdca-li.js.map M static/maps/mvc/history/hdca-model.js.map M static/maps/mvc/history/history-contents.js.map M static/maps/mvc/tool/tool-form-composite.js.map M static/maps/mvc/tool/tool-template.js.map M static/maps/viz/trackster/painters.js.map M static/maps/viz/trackster/tracks.js.map M 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tools/stats/aggregate_scores_in_intervals.py M tools/stats/gsummary.xml M tox.ini Log Message: ----------- Merge branch 'dev' into charts_revision_000 Commit: 9c1ee51e3a48c12e43071afafeb1847d66ddaa78 https://github.com/galaxyproject/galaxy/commit/9c1ee51e3a48c12e43071afafeb18... 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