1 new commit in galaxy-central:

https://bitbucket.org/galaxy/galaxy-central/commits/2454aa4b6e7c/ changeset: 2454aa4b6e7c user: carlfeberhard date: 2013-03-01 18:49:08 summary: fix server_env saved output dir name; clean up prev. debugging statements affected #: 3 files

diff -r 153f7f450f4b7537bc8866f09b5cc3ca57ad25ee -r 2454aa4b6e7c308a90bb6ad7f00c47f6177e992a lib/galaxy/app.py --- a/lib/galaxy/app.py +++ b/lib/galaxy/app.py @@ -45,8 +45,6 @@ self.tool_shed_registry = tool_shed.tool_shed_registry.Registry( self.config.root, self.config.tool_sheds_config ) else: self.tool_shed_registry = None - log.debug( 'self.config.tool_sheds_config: %s, self.tool_shed_registry: %s', - self.config.tool_sheds_config, self.tool_shed_registry ) # Initialize database / check for appropriate schema version. # If this # is a new installation, we'll restrict the tool migration messaging. from galaxy.model.migrate.check import create_or_verify_database

diff -r 153f7f450f4b7537bc8866f09b5cc3ca57ad25ee -r 2454aa4b6e7c308a90bb6ad7f00c47f6177e992a scripts/functional_tests.py --- a/scripts/functional_tests.py +++ b/scripts/functional_tests.py @@ -42,7 +42,6 @@ import nose.loader import nose.plugins.manager

-import pprint log = logging.getLogger( "functional_tests.py" )

default_galaxy_test_host = "localhost" @@ -227,7 +226,6 @@ kwargs[ 'object_store' ] = 'distributed' kwargs[ 'distributed_object_store_config_file' ] = 'distributed_object_store_conf.xml.sample' # Build the Universe Application - print 'app.kwargs:\n%s' %( pprint.pformat( kwargs ) ) app = UniverseApplication( job_queue_workers = 5, id_secret = 'changethisinproductiontoo', template_path = "templates",

diff -r 153f7f450f4b7537bc8866f09b5cc3ca57ad25ee -r 2454aa4b6e7c308a90bb6ad7f00c47f6177e992a test/casperjs/server_env.py --- a/test/casperjs/server_env.py +++ b/test/casperjs/server_env.py @@ -29,6 +29,9 @@

@classmethod def instance( cls, config=None ): + """Returns the singleton of TestEnvironment, instantiating it first if it + does not yet exist. + """ # singleton pattern if( ( not cls._instance ) or ( config ) ): @@ -36,25 +39,26 @@ cls._instance = cls( config ) return cls._instance

- @classmethod - def get_server_url( cls ): - return cls.instance().url - def __init__( self, env_config_dict=None ): self.config = env_config_dict or {}

- self.protocol = self._get_setting_from_config_or_env( 'protocol', self.ENV_PROTOCOL, self.DEFAULT_PROTOCOL ) - self.host = self._get_setting_from_config_or_env( 'host', self.ENV_HOST, self.DEFAULT_HOST ) - self.port = self._get_setting_from_config_or_env( 'port', self.ENV_PORT, self.DEFAULT_PORT ) + self.protocol = self._get_setting_from_config_or_env( + 'protocol', self.ENV_PROTOCOL, self.DEFAULT_PROTOCOL ) + self.host = self._get_setting_from_config_or_env( + 'host', self.ENV_HOST, self.DEFAULT_HOST ) + self.port = self._get_setting_from_config_or_env( + 'port', self.ENV_PORT, self.DEFAULT_PORT )

- self.history_id = self._get_setting_from_config_or_env( 'history_id', self.ENV_HISTORY_ID, default=None ) - self.file_dir = self._get_setting_from_config_or_env( 'file_dir', self.ENV_FILE_DIR, default=None ) + self.history_id = self._get_setting_from_config_or_env( + 'history_id', self.ENV_HISTORY_ID, default=None ) + self.file_dir = self._get_setting_from_config_or_env( + 'file_dir', self.ENV_FILE_DIR, default=None )

self.tool_shed_test_file = self._get_setting_from_config_or_env( 'tool_shed_test_file', self.ENV_TOOL_SHED_TEST_FILE, default=None ) self.shed_tools_dict = self._get_shed_tools_dict()

- self.keepOutdir = self._get_setting_from_config_or_env( + self.saved_output_dir = self._get_setting_from_config_or_env( 'saved_output_dir', self.ENV_SAVED_FILES_DIR, default=None ) self._init_saved_files_dir()

@@ -62,6 +66,7 @@ """Try to get a setting from (in order): TestEnvironment.config, the os env, or some default (if not False). """ + #TODO: if falsy value needed, use None - not ideal config = self.config.get( config_name, None ) env = os.environ.get( env_name, None ) if( ( not ( config or env ) ) @@ -94,6 +99,8 @@

@property def url( self ): + """Builds and returns the url of the test server. + """ url = '%s://%s' %( self.protocol, self.host ) if self.port and self.port != 80: url += ':%s' %( str( self.port ) )

Repository URL: https://bitbucket.org/galaxy/galaxy-central/

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