Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 31e31e692311ba2e9f11d3eabe5253628f8e39c9 https://github.com/galaxyproject/galaxy/commit/31e31e692311ba2e9f11d3eabe525... Author: nekrut <anton@nekrut.org> Date: 2018-02-19 (Mon, 19 Feb 2018) Changed paths: M config/datatypes_conf.xml.sample A lib/galaxy/datatypes/converters/fastagz_to_fasta.xml M lib/galaxy/datatypes/sequence.py M lib/galaxy/datatypes/sniff.py Log Message: ----------- added fasta.gz Commit: d79717b86e0b6ecf5e540eb939888066b88081de https://github.com/galaxyproject/galaxy/commit/d79717b86e0b6ecf5e540eb939888... Author: nekrut <anton@nekrut.org> Date: 2018-02-19 (Mon, 19 Feb 2018) Changed paths: M lib/galaxy/datatypes/sequence.py Log Message: ----------- fixed flake8 errors Commit: 8cec1fd592a354be9b055fbb8b7f3ce72df39990 https://github.com/galaxyproject/galaxy/commit/8cec1fd592a354be9b055fbb8b7f3... Author: nekrut <anton@nekrut.org> Date: 2018-02-19 (Mon, 19 Feb 2018) Changed paths: M lib/galaxy/datatypes/sequence.py Log Message: ----------- removing stray whitespace Commit: d34524ff8adc694e41f0e582a57f705f2ed0dd7d https://github.com/galaxyproject/galaxy/commit/d34524ff8adc694e41f0e582a57f7... Author: nekrut <anton@nekrut.org> Date: 2018-02-19 (Mon, 19 Feb 2018) Changed paths: M lib/galaxy/datatypes/converters/fastagz_to_fasta.xml Log Message: ----------- fixed name of fastagz->fasta converter Commit: c4ce9695bbb577a0e9514c5cb71069156d33a943 https://github.com/galaxyproject/galaxy/commit/c4ce9695bbb577a0e9514c5cb7106... Author: Martin Cech <marten@bx.psu.edu> Date: 2018-02-19 (Mon, 19 Feb 2018) Changed paths: M lib/galaxy/datatypes/converters/fastagz_to_fasta.xml Log Message: ----------- fix copypasta Commit: 9feaf85585a30820dd71762431e1ed7d5b5c3b5e https://github.com/galaxyproject/galaxy/commit/9feaf85585a30820dd71762431e1e... Author: Martin Cech <marten@bx.psu.edu> Date: 2018-02-19 (Mon, 19 Feb 2018) Changed paths: M lib/galaxy/datatypes/sequence.py Log Message: ----------- fix more fasta copypasta Commit: 17a5d20278f7306e69e77054f92d976020e048ee https://github.com/galaxyproject/galaxy/commit/17a5d20278f7306e69e77054f92d9... Author: John Chilton <jmchilton@gmail.com> Date: 2018-02-19 (Mon, 19 Feb 2018) Changed paths: M run_tests.sh Log Message: ----------- In test framework only build client if running Selenium tests. These shouldn't be required for any other test types I believe and it slows things down. Commit: 2ca339d2b7cfdde817097837033e317a19b4a801 https://github.com/galaxyproject/galaxy/commit/2ca339d2b7cfdde817097837033e3... Author: Jelle Scholtalbers <j.scholtalbers@gmail.com> Date: 2018-02-20 (Tue, 20 Feb 2018) Changed paths: M lib/galaxy/auth/__init__.py Log Message: ----------- fix broken admin 'create new user' when registration =='challenge' Commit: 01776c617b691c467e423c7a5f60c17be9b71503 https://github.com/galaxyproject/galaxy/commit/01776c617b691c467e423c7a5f60c... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-02-20 (Tue, 20 Feb 2018) Changed paths: M lib/galaxy/auth/__init__.py Log Message: ----------- Merge pull request #5569 from scholtalbers/fix/broken_create_new_user_challenge [18.01] fix broken admin 'create new user' when registration =='challenge' Commit: 99f7de456ce953f36e6122270209083fe443654b https://github.com/galaxyproject/galaxy/commit/99f7de456ce953f36e61222702090... Author: Martin Cech <marten@bx.psu.edu> Date: 2018-02-20 (Tue, 20 Feb 2018) Changed paths: M run_tests.sh Log Message: ----------- Merge pull request #5566 from jmchilton/optimize_tests_0 [18.01] In test framework only build client if running Selenium tests. Commit: 7715838dbbbcad980a47d1a96619b6e91fa7a623 https://github.com/galaxyproject/galaxy/commit/7715838dbbbcad980a47d1a96619b... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-02-20 (Tue, 20 Feb 2018) Changed paths: M config/datatypes_conf.xml.sample A lib/galaxy/datatypes/converters/fastagz_to_fasta.xml M lib/galaxy/datatypes/sequence.py M lib/galaxy/datatypes/sniff.py Log Message: ----------- Merge pull request #5561 from martenson/backport-fastgz [18.01] add fasta.gz support Commit: af0b40ea95c5244c58fbaa545b81ef4c4eff7cf0 https://github.com/galaxyproject/galaxy/commit/af0b40ea95c5244c58fbaa545b81e... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-02-21 (Wed, 21 Feb 2018) Changed paths: M lib/galaxy/web/proxy/js/package.json Log Message: ----------- Bump sqlite3 dependency for web proxy Commit: 5d422898582446575dfe30d13805c9e13a3f8104 https://github.com/galaxyproject/galaxy/commit/5d422898582446575dfe30d13805c... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2018-02-21 (Wed, 21 Feb 2018) Changed paths: M lib/galaxy/web/proxy/js/package.json Log Message: ----------- Minor updates to commander, http-proxy. eventemitter3 is several major versions behind, needs testing before upgrade. Commit: b5b41d6172bd7e2894efcc3b423b11a37fb92823 https://github.com/galaxyproject/galaxy/commit/b5b41d6172bd7e2894efcc3b423b1... Author: Björn Grüning <bjoern@gruenings.eu> Date: 2018-02-21 (Wed, 21 Feb 2018) Changed paths: M lib/galaxy/web/proxy/js/package.json Log Message: ----------- Merge pull request #5575 from dannon/web_proxy_fixes [18.01] Bump sqlite3 dependency for web proxy Commit: eddc81cc98308dd9e2e07a783b20ba8b9985be33 https://github.com/galaxyproject/galaxy/commit/eddc81cc98308dd9e2e07a783b20b... Author: Nicola Soranzo <nicola.soranzo@earlham.ac.uk> Date: 2018-02-21 (Wed, 21 Feb 2018) Changed paths: M lib/galaxy/auth/__init__.py M lib/galaxy/web/proxy/js/package.json M run_tests.sh Log Message: ----------- Merge branch 'release_18.01' into dev Compare: https://github.com/galaxyproject/galaxy/compare/697e80186541...eddc81cc9830