Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: ad925ddfcaa205918aac2f4fb48e4b6f93edf29c https://github.com/galaxyproject/galaxy/commit/ad925ddfcaa205918aac2f4fb48e4... Author: Milad Miladi <miladim@cs.uni-freiburg.de> Date: 2017-11-10 (Fri, 10 Nov 2017) Changed paths: M config/datatypes_conf.xml.sample A lib/galaxy/datatypes/infernal.py Log Message: ----------- add infernal-cm datatype Commit: 772bab983d28235e2f16c2e85803309917a1a179 https://github.com/galaxyproject/galaxy/commit/772bab983d28235e2f16c2e858033... Author: Milad Miladi <miladim@cs.uni-freiburg.de> Date: 2017-11-10 (Fri, 10 Nov 2017) Changed paths: M lib/galaxy/datatypes/infernal.py Log Message: ----------- simplify sniff Commit: ad3f54676943e57aa089358c2b4ec8163e824220 https://github.com/galaxyproject/galaxy/commit/ad3f54676943e57aa089358c2b4ec... Author: Milad Miladi <miladim@cs.uni-freiburg.de> Date: 2017-11-10 (Fri, 10 Nov 2017) Changed paths: M lib/galaxy/datatypes/infernal.py Log Message: ----------- no cm count Commit: 3b394e10c9ffa13e0de1c6163c1012053d005c27 https://github.com/galaxyproject/galaxy/commit/3b394e10c9ffa13e0de1c6163c101... Author: Milad Miladi <miladim@cs.uni-freiburg.de> Date: 2017-11-10 (Fri, 10 Nov 2017) Changed paths: M lib/galaxy/datatypes/infernal.py Log Message: ----------- lint py3 Commit: 2c083e24e8716c8c61fab2a213d25ae928b07210 https://github.com/galaxyproject/galaxy/commit/2c083e24e8716c8c61fab2a213d25... Author: Milad Miladi <miladim@cs.uni-freiburg.de> Date: 2017-11-10 (Fri, 10 Nov 2017) Changed paths: M lib/galaxy/datatypes/infernal.py Log Message: ----------- lint py3 fix Commit: 0f8fbed83b4dae66529802fe98fa83737375751d https://github.com/galaxyproject/galaxy/commit/0f8fbed83b4dae66529802fe98fa8... Author: Milad Miladi <miladim@cs.uni-freiburg.de> Date: 2017-11-10 (Fri, 10 Nov 2017) Changed paths: M lib/galaxy/datatypes/infernal.py Log Message: ----------- reorder import Commit: 22072a6cdb89b4a87b9e81274485c5ef7f2e94ee https://github.com/galaxyproject/galaxy/commit/22072a6cdb89b4a87b9e81274485c... Author: Milad Miladi <miladim@cs.uni-freiburg.de> Date: 2017-11-10 (Fri, 10 Nov 2017) Changed paths: M lib/galaxy/datatypes/infernal.py Log Message: ----------- minor reorders Commit: f52c5de5fb838e2dac6d447605db020752332639 https://github.com/galaxyproject/galaxy/commit/f52c5de5fb838e2dac6d447605db0... Author: Milad Miladi <miladim@cs.uni-freiburg.de> Date: 2017-11-11 (Sat, 11 Nov 2017) Changed paths: M config/datatypes_conf.xml.sample R lib/galaxy/datatypes/infernal.py M lib/galaxy/datatypes/msa.py Log Message: ----------- merge infernal into msa Commit: f33ee573e9b15f1479e5ab36facdcc7032a3264b https://github.com/galaxyproject/galaxy/commit/f33ee573e9b15f1479e5ab36facdc... Author: Milad Miladi <miladim@cs.uni-freiburg.de> Date: 2017-11-11 (Sat, 11 Nov 2017) Changed paths: M lib/galaxy/datatypes/msa.py Log Message: ----------- minor fix Commit: 5cb1cb5ec20107a95755e1b6bcb69909878d002d https://github.com/galaxyproject/galaxy/commit/5cb1cb5ec20107a95755e1b6bcb69... Author: Milad Miladi <miladim@cs.uni-freiburg.de> Date: 2017-11-17 (Fri, 17 Nov 2017) Changed paths: M lib/galaxy/datatypes/msa.py Log Message: ----------- Rename class, add CM version Commit: 20278b8b31ec15bd21f3ae8ff620472644a11b41 https://github.com/galaxyproject/galaxy/commit/20278b8b31ec15bd21f3ae8ff6204... Author: Milad Miladi <miladim@cs.uni-freiburg.de> Date: 2018-01-05 (Fri, 05 Jan 2018) Changed paths: M config/datatypes_conf.xml.sample M lib/galaxy/datatypes/msa.py A lib/galaxy/datatypes/test/infernal_model.cm Log Message: ----------- add unit-test, fix class name Commit: 86955b4b3c907412916519a75ae30eca86ed8abf https://github.com/galaxyproject/galaxy/commit/86955b4b3c907412916519a75ae30... Author: Milad Miladi <miladim@cs.uni-freiburg.de> Date: 2018-01-05 (Fri, 05 Jan 2018) Changed paths: M lib/galaxy/datatypes/msa.py Log Message: ----------- remove split for cm Commit: a73d566f1fa812e4e8ce4c32baa61647e689b5ac https://github.com/galaxyproject/galaxy/commit/a73d566f1fa812e4e8ce4c32baa61... Author: Milad Miladi <miladim@cs.uni-freiburg.de> Date: 2018-01-05 (Fri, 05 Jan 2018) Changed paths: M lib/galaxy/datatypes/msa.py Log Message: ----------- Dynamically set cm_version Commit: 5c415e6855987ac87bdc4318cd5e5ed512811496 https://github.com/galaxyproject/galaxy/commit/5c415e6855987ac87bdc4318cd5e5... 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9c5c7e9caa404cac1b7c1a000df5c1310775e85e https://github.com/galaxyproject/galaxy/commit/9c5c7e9caa404cac1b7c1a000df5c... Author: Milad Miladi <miladim@cs.uni-freiburg.de> Date: 2018-01-05 (Fri, 05 Jan 2018) Changed paths: M lib/galaxy/datatypes/msa.py Log Message: ----------- Fix Commit: 6bc2250daba23c56302e255d64ee7a8e64a4845b https://github.com/galaxyproject/galaxy/commit/6bc2250daba23c56302e255d64ee7... Author: Milad Miladi <miladim@cs.uni-freiburg.de> Date: 2018-01-05 (Fri, 05 Jan 2018) Changed paths: M lib/galaxy/datatypes/msa.py Log Message: ----------- to pass pylint Commit: 8e4fbe7cf35695122b77cd159b258a8e3352fa1b https://github.com/galaxyproject/galaxy/commit/8e4fbe7cf35695122b77cd159b258... Author: Milad Miladi <miladim@cs.uni-freiburg.de> Date: 2018-01-05 (Fri, 05 Jan 2018) Changed paths: M lib/galaxy/datatypes/test/infernal_model.cm Log Message: ----------- smaller cm test file Commit: a0750864a6062012a301bf612a4409659406bc54 https://github.com/galaxyproject/galaxy/commit/a0750864a6062012a301bf612a440... Author: Milad Miladi <miladim@cs.uni-freiburg.de> Date: 2018-01-05 (Fri, 05 Jan 2018) Changed paths: M lib/galaxy/datatypes/msa.py Log Message: ----------- minor changes Commit: e73be6fe12f0715b275c3a75d5ce2ab66a98cb37 https://github.com/galaxyproject/galaxy/commit/e73be6fe12f0715b275c3a75d5ce2... Author: Milad Miladi <miladim@cs.uni-freiburg.de> Date: 2018-01-05 (Fri, 05 Jan 2018) Changed paths: M lib/galaxy/datatypes/msa.py Log Message: ----------- fix typo Commit: c7581f867de0b1386ded887f69ef10373cfb7e1b https://github.com/galaxyproject/galaxy/commit/c7581f867de0b1386ded887f69ef1... Author: Marius van den Beek <m.vandenbeek@gmail.com> Date: 2018-01-11 (Thu, 11 Jan 2018) Changed paths: M config/datatypes_conf.xml.sample M lib/galaxy/datatypes/msa.py A lib/galaxy/datatypes/test/infernal_model.cm Log Message: ----------- Merge pull request #4977 from mmiladi/cm-datatype add infernal-cm datatype Compare: https://github.com/galaxyproject/galaxy/compare/812f5f563047...c7581f867de0