1 new commit in galaxy-central:

https://bitbucket.org/galaxy/galaxy-central/commits/6187607058e6/ Changeset: 6187607058e6 User: carlfeberhard Date: 2013-07-23 16:12:59 Summary: api/genomes, create: update docs Affected #: 1 file

diff -r 547bfb9b7bbe090f93dc4b0935522662bb9805b5 -r 6187607058e66e1b8b31f2da905d603ae0c65f23 lib/galaxy/webapps/galaxy/api/genomes.py --- a/lib/galaxy/webapps/galaxy/api/genomes.py +++ b/lib/galaxy/webapps/galaxy/api/genomes.py @@ -49,19 +49,14 @@ Download and/or index a genome.

Parameters:: - - dbkey DB key of the build to download, ignored unless 'UCSC' is specified as the source - ncbi_name NCBI's genome identifier, ignored unless NCBI is specified as the source - ensembl_dbkey Ensembl's genome identifier, ignored unless Ensembl is specified as the source - url_dbkey DB key to use for this build, ignored unless URL is specified as the source - source Data source for this build. Can be: UCSC, Ensembl, NCBI, URL + liftover None or array of liftover url partial paths + dbkey DB key of the build to download indexers POST array of indexers to run after downloading (indexers[] = first, indexers[] = second, ...) + longname a more descriptive name for the genome func Allowed values: 'download' Download and index 'index' Index only - Returns:: - If no error: dict( status: 'ok', job: <job ID> )

@@ -69,6 +64,17 @@ dict( status: 'error', error: <error message> )

""" + #??: Planned? + #Parameters:: + # dbkey DB key of the build to download, ignored unless 'UCSC' is specified as the source + # ncbi_name NCBI's genome identifier, ignored unless NCBI is specified as the source + # ensembl_dbkey Ensembl's genome identifier, ignored unless Ensembl is specified as the source + # url_dbkey DB key to use for this build, ignored unless URL is specified as the source + # source Data source for this build. Can be: UCSC, Ensembl, NCBI, URL + # indexers POST array of indexers to run after downloading (indexers[] = first, indexers[] = second, ...) + # func Allowed values: + # 'download' Download and index + # 'index' Index only params = util.Params( payload ) from galaxy.web.controllers.data_admin import build_param_dict as massage paramdict = massage( params, trans )

Repository URL: https://bitbucket.org/galaxy/galaxy-central/

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