1 new changeset in galaxy-central:

http://bitbucket.org/galaxy/galaxy-central/changeset/32b3ed6d5255/ changeset: 32b3ed6d5255 user: jgoecks date: 2011-09-15 23:10:39 summary: Comment the Trinity assembler out of the sample tool conf so that it must be explicitly enabled. affected #: 1 file (-1 bytes)

--- a/tool_conf.xml.sample Wed Sep 14 14:41:19 2011 -0400 +++ b/tool_conf.xml.sample Thu Sep 15 17:10:39 2011 -0400 @@ -338,8 +338,11 @@ <tool file="ngs_rna/cufflinks_wrapper.xml" /><tool file="ngs_rna/cuffcompare_wrapper.xml" /><tool file="ngs_rna/cuffdiff_wrapper.xml" /> + <!-- Trinity is very memory-intensive and should only be enabled/run + on instances with sufficient resources. <label text="De novo Assembly" id="de_novo_assembly "/><tool file="ngs_rna/trinity_all.xml" /> + --><label text="Filtering" id="filtering" /><tool file="ngs_rna/filter_transcripts_via_tracking.xml" /></section>

Repository URL: https://bitbucket.org/galaxy/galaxy-central/

--

This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.