Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: c0a3e6c12a32f0e2fc1c657493a9a2ad3e515b03 https://github.com/galaxyproject/galaxy/commit/c0a3e6c12a32f0e2fc1c657493a9a... Author: Nate Coraor <nate@bx.psu.edu> Date: 2017-11-13 (Mon, 13 Nov 2017) Changed paths: M lib/galaxy/objectstore/__init__.py M lib/galaxy/objectstore/azure_blob.py M lib/galaxy/objectstore/pithos.py M lib/galaxy/objectstore/rods.py M lib/galaxy/objectstore/s3.py M lib/tool_shed/capsule/capsule_manager.py Log Message: ----------- Update imports for galaxy.util.path moves Commit: ae720d6f4cea03268e8303454088c89c4849cf41 https://github.com/galaxyproject/galaxy/commit/ae720d6f4cea03268e8303454088c... Author: Nate Coraor <nate@bx.psu.edu> Date: 2017-11-13 (Mon, 13 Nov 2017) Changed paths: M lib/galaxy/tools/toolbox/base.py Log Message: ----------- Log a more useful error message when tool loading fails due to IOError/OSError or a nonexistent tool config. Commit: f8e59b922a8bad9f1ca0b6b62eae6707144e4456 https://github.com/galaxyproject/galaxy/commit/f8e59b922a8bad9f1ca0b6b62eae6... Author: Nate Coraor <nate@bx.psu.edu> Date: 2017-11-13 (Mon, 13 Nov 2017) Changed paths: M lib/galaxy/util/__init__.py Log Message: ----------- Improve util.listify documentation and allow it to accept tuples Commit: f5ee540df102526219f8347bbcb7217fbb704b11 https://github.com/galaxyproject/galaxy/commit/f5ee540df102526219f8347bbcb72... Author: Nate Coraor <nate@bx.psu.edu> Date: 2017-11-13 (Mon, 13 Nov 2017) Changed paths: A lib/galaxy/util/script.py M scripts/manage_tool_dependencies.py Log Message: ----------- To avoid duplication, move common utilities used by external scripts to galaxy.util.script. Update one such script to use the new module. Commit: eed12ad15c9bd3f5ba9122826e5f6be0e8a4e615 https://github.com/galaxyproject/galaxy/commit/eed12ad15c9bd3f5ba9122826e5f6... Author: Nate Coraor <nate@bx.psu.edu> Date: 2017-11-13 (Mon, 13 Nov 2017) Changed paths: M lib/galaxy/util/__init__.py Log Message: ----------- Docstring fixes Commit: fb78cb6be3fa6e7debb6ac4e5e528322571afd03 https://github.com/galaxyproject/galaxy/commit/fb78cb6be3fa6e7debb6ac4e5e528... Author: Nicola Soranzo <nsoranzo@tiscali.it> Date: 2017-11-14 (Tue, 14 Nov 2017) Changed paths: M lib/galaxy/objectstore/__init__.py M lib/galaxy/objectstore/azure_blob.py M lib/galaxy/objectstore/pithos.py M lib/galaxy/objectstore/rods.py M lib/galaxy/objectstore/s3.py M lib/galaxy/tools/toolbox/base.py M lib/galaxy/util/__init__.py A lib/galaxy/util/script.py M lib/tool_shed/capsule/capsule_manager.py M scripts/manage_tool_dependencies.py Log Message: ----------- Merge pull request #4994 from natefoo/non-mule-changes Changes made while working on uWSGI mules that don't belong in the mules PR Compare: https://github.com/galaxyproject/galaxy/compare/95c297c5560c...fb78cb6be3fa