Branch: refs/heads/release_18.01 Home: https://github.com/galaxyproject/galaxy Commit: ba47188f5e896d9f2bd6718796093f05e1c7aa9b https://github.com/galaxyproject/galaxy/commit/ba47188f5e896d9f2bd6718796093... Author: mvdbeek m.vandenbeek@gmail.com Date: 2018-08-06 (Mon, 06 Aug 2018)

Changed paths: M test/api/test_workflows.py M test/base/workflows_format_2/converter.py

Log Message: ----------- Introduce test for auto-labelling subworkflow workflow outputs

Commit: 21fd74e640c2ba872d98259ea213e20e99c6ba75 https://github.com/galaxyproject/galaxy/commit/21fd74e640c2ba872d98259ea213e... Author: mvdbeek m.vandenbeek@gmail.com Date: 2018-08-06 (Mon, 06 Aug 2018)

Changed paths: M lib/galaxy/workflow/modules.py

Log Message: ----------- Use subworkflow index when setting auto-label

Previously this would reference the parent workflow index, while the get_data module would use the subworkflow index. This means defining workflows worked fine, but executing would fail when trying to find the output to replace. Using the subworkflow index here seems like the correct thing to do.

Fixes https://github.com/galaxyproject/galaxy/issues/6560

Commit: 6d9df51f36e293bd1ce20d3bf9e21a5646ff5b94 https://github.com/galaxyproject/galaxy/commit/6d9df51f36e293bd1ce20d3bf9e21... Author: Dannon dannon.baker@gmail.com Date: 2018-08-06 (Mon, 06 Aug 2018)

Changed paths: M lib/galaxy/workflow/modules.py M test/api/test_workflows.py M test/base/workflows_format_2/converter.py

Log Message: ----------- Merge pull request #6570 from mvdbeek/fix_auto_labelling_and_output_recovery

[18.01] Use subworkflow index when setting auto-label

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