[galaxyproject/galaxy] b39f21: Fix to mount job directory in Docker for #1688.
Branch: refs/heads/release_16.07 Home: https://github.com/galaxyproject/galaxy Commit: b39f2143fac4f2be29477d4b1c5542bfe7dd0946 https://github.com/galaxyproject/galaxy/commit/b39f2143fac4f2be29477d4b1c554... Author: John Chilton <jmchilton@gmail.com> Date: 2016-08-05 (Fri, 05 Aug 2016) Changed paths: M config/job_conf.xml.sample_advanced M lib/galaxy/jobs/runners/__init__.py M lib/galaxy/tools/deps/containers.py Log Message: ----------- Fix to mount job directory in Docker for #1688. The default for this was including GALAXY_ROOT so in testing (and many deployments) the job directory would have been picked up anyway because it is in `database/` but if job directory was outside of `$GALAXY_ROOT/database/` one needed to add it to the volumes mounted by Docker. This fix mounts just that directory - so no need for instance to mount all job directories which one could have done. Commit: a7664f00f92a97258050d580aef1b6e439cc2f6d https://github.com/galaxyproject/galaxy/commit/a7664f00f92a97258050d580aef1b... Author: Martin Cech <cech.marten@gmail.com> Date: 2016-08-08 (Mon, 08 Aug 2016) Changed paths: M config/job_conf.xml.sample_advanced M lib/galaxy/jobs/runners/__init__.py M lib/galaxy/tools/deps/containers.py Log Message: ----------- Merge pull request #2745 from jmchilton/16.04_fix_docker_job_directory_default [16.04] Fix to mount job directory in Docker for #1688. Commit: a334b189ba325a806da26cc7ac005c55960e966c https://github.com/galaxyproject/galaxy/commit/a334b189ba325a806da26cc7ac005... Author: Dannon Baker <dannon.baker@gmail.com> Date: 2016-08-08 (Mon, 08 Aug 2016) Changed paths: M config/job_conf.xml.sample_advanced M lib/galaxy/jobs/runners/__init__.py M lib/galaxy/tools/deps/containers.py Log Message: ----------- Merge branch 'release_16.04' into release_16.07 Compare: https://github.com/galaxyproject/galaxy/compare/7d5bbf7a4421...a334b189ba32
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