Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: cb40b01db8a29e2662610ce3cec5bf104c939ba8 https://github.com/galaxyproject/galaxy/commit/cb40b01db8a29e2662610ce3cec5b... Author: peterjc p.j.a.cock@googlemail.com Date: 2017-06-26 (Mon, 26 Jun 2017)

Changed paths: M tools/filters/gff/gff_filter_by_attribute.py

Log Message: ----------- Ignore blank lines and comments in GFF files

Previously would wrongly issue warnings about valid # lines. Closes #3067

Commit: c87e0eedb79247240875a411aec0799e3e2460b2 https://github.com/galaxyproject/galaxy/commit/c87e0eedb79247240875a411aec07... Author: peterjc p.j.a.cock@googlemail.com Date: 2017-06-26 (Mon, 26 Jun 2017)

Changed paths: A test-data/5_Ig-like.gff M tools/filters/gff/gff_filter_by_attribute.py M tools/filters/gff/gff_filter_by_attribute.xml

Log Message: ----------- Cope with GFF3 as well as legacy GFF.

In GFF3 have key=value rather than space separated as in legacy GFF and GTF format. Closes #3068.

Commit: 005f3d9f9837d91468bd8f253d2752e51885de10 https://github.com/galaxyproject/galaxy/commit/005f3d9f9837d91468bd8f253d275... Author: peterjc p.j.a.cock@googlemail.com Date: 2017-06-26 (Mon, 26 Jun 2017)

Changed paths: M tools/filters/gff/gff_filter_by_attribute.py

Log Message: ----------- Defensive code in case standard GFF fields missing

Commit: 46dbf8d10c6d229a53566e799b36aa34c1a83c7c https://github.com/galaxyproject/galaxy/commit/46dbf8d10c6d229a53566e799b36a... Author: Björn Grüning bjoern@gruenings.eu Date: 2017-06-26 (Mon, 26 Jun 2017)

Changed paths: A test-data/5_Ig-like.gff M tools/filters/gff/gff_filter_by_attribute.py M tools/filters/gff/gff_filter_by_attribute.xml

Log Message: ----------- Merge pull request #3076 from peterjc/gff3_filter_by_attribute

GFF3 support in filter by attribute

Compare: https://github.com/galaxyproject/galaxy/compare/ce1316d6808e...46dbf8d10c6d