commit/galaxy-central: dan: Fix for maf_utilities.build_maf_index_species_chromosomes() return values when a bad MAF is provided.
1 new changeset in galaxy-central: http://bitbucket.org/galaxy/galaxy-central/changeset/ef89e4d62007/ changeset: ef89e4d62007 user: dan date: 2011-09-23 16:38:27 summary: Fix for maf_utilities.build_maf_index_species_chromosomes() return values when a bad MAF is provided. affected #: 1 file (-1 bytes) --- a/lib/galaxy/tools/util/maf_utilities.py Fri Sep 23 10:07:19 2011 -0400 +++ b/lib/galaxy/tools/util/maf_utilities.py Fri Sep 23 10:38:27 2011 -0400 @@ -227,7 +227,7 @@ except Exception, e: #most likely a bad MAF log.debug( 'Building MAF index on %s failed: %s' % ( filename, e ) ) - return ( None, [], {} ) + return ( None, [], {}, 0 ) return ( indexes, species, species_chromosomes, blocks ) #builds and returns ( index, index_filename ) for specified maf_file Repository URL: https://bitbucket.org/galaxy/galaxy-central/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.
participants (1)
-
Bitbucket