[galaxyproject/galaxy] 1b52d2: Fix a bug in cloud storage api calling a non-exist...
Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 1b52d247b4d12a5a000c72cf8c78f6856562d6af https://github.com/galaxyproject/galaxy/commit/1b52d247b4d12a5a000c72cf8c78f... Author: vjalili <jalili.vahid@gmail.com> Date: 2018-07-19 (Thu, 19 Jul 2018) Changed paths: M lib/galaxy/webapps/galaxy/api/cloud.py Log Message: ----------- Fix a bug in cloud storage api calling a non-existing function from manager. Commit: d2adf34f96e3ffc96ef5b0a63198ab525a5bc602 https://github.com/galaxyproject/galaxy/commit/d2adf34f96e3ffc96ef5b0a63198a... Author: vjalili <jalili.vahid@gmail.com> Date: 2018-07-19 (Thu, 19 Jul 2018) Changed paths: M lib/galaxy/managers/cloud.py Log Message: ----------- Use signed URLs to copy data from cloud to Galaxy, instead of staging them. Commit: 8f35166746f9f7b155bf98b37e41278d7f3a2389 https://github.com/galaxyproject/galaxy/commit/8f35166746f9f7b155bf98b37e412... Author: vjalili <jalili.vahid@gmail.com> Date: 2018-07-19 (Thu, 19 Jul 2018) Changed paths: M lib/galaxy/managers/cloud.py Log Message: ----------- Update error message of failing to copy from cloud to Galaxy. Commit: 13ae24ce01c22078a2d7a16a730bd9c99e301c98 https://github.com/galaxyproject/galaxy/commit/13ae24ce01c22078a2d7a16a730bd... Author: vjalili <jalili.vahid@gmail.com> Date: 2018-07-19 (Thu, 19 Jul 2018) Changed paths: M lib/galaxy/managers/cloud.py Log Message: ----------- Add `SIGNED_URL_TTL` in cloud storage manager. Commit: a146aeac63fa9513f0232f69337a782a48a2e17f https://github.com/galaxyproject/galaxy/commit/a146aeac63fa9513f0232f69337a7... Author: vjalili <jalili.vahid@gmail.com> Date: 2018-07-20 (Fri, 20 Jul 2018) Changed paths: M lib/galaxy/managers/cloud.py Log Message: ----------- Fix lint issues: remove unused imports and add a missing blank line. Commit: be4e4d3dae178243db0ca6b6ddd6f68bbe947d21 https://github.com/galaxyproject/galaxy/commit/be4e4d3dae178243db0ca6b6ddd6f... Author: vjalili <jalili.vahid@gmail.com> Date: 2018-07-23 (Mon, 23 Jul 2018) Changed paths: M lib/galaxy/managers/cloud.py M lib/galaxy/webapps/galaxy/api/cloud.py M lib/galaxy/webapps/galaxy/buildapp.py Log Message: ----------- Rename API: from `copy-from` to `upload`, and update docs. Commit: a6cf909fd064bb37491c0b8e44090ef814dc51aa https://github.com/galaxyproject/galaxy/commit/a6cf909fd064bb37491c0b8e44090... Author: vjalili <jalili.vahid@gmail.com> Date: 2018-07-23 (Mon, 23 Jul 2018) Changed paths: M lib/galaxy/managers/cloud.py M lib/galaxy/webapps/galaxy/api/cloud.py M lib/galaxy/webapps/galaxy/buildapp.py Log Message: ----------- Rename API: from `copy-to` to `download`, and update docs. Commit: 3e7bfc8069c20057d0fc8fff81cd0c10fe8617f0 https://github.com/galaxyproject/galaxy/commit/3e7bfc8069c20057d0fc8fff81cd0... Author: vjalili <jalili.vahid@gmail.com> Date: 2018-07-23 (Mon, 23 Jul 2018) Changed paths: M lib/galaxy/managers/cloud.py Log Message: ----------- Append `job_errors` to cloud upload api error messages. Commit: 0dde5d3253e81af3beb13e515f765b9cdcb10771 https://github.com/galaxyproject/galaxy/commit/0dde5d3253e81af3beb13e515f765... Author: vjalili <jalili.vahid@gmail.com> Date: 2018-07-23 (Mon, 23 Jul 2018) Changed paths: M lib/galaxy/managers/cloud.py M lib/galaxy/webapps/galaxy/api/cloud.py Log Message: ----------- Update cloud storage Upload API and manager to take a list of objects. Commit: 99f9d72fd462b51e67e97157a0445fcd576ca660 https://github.com/galaxyproject/galaxy/commit/99f9d72fd462b51e67e97157a0445... Author: vjalili <jalili.vahid@gmail.com> Date: 2018-07-23 (Mon, 23 Jul 2018) Changed paths: M lib/galaxy/webapps/galaxy/api/cloud.py Log Message: ----------- remove an extra blank line in cloud api. Commit: 46e18dc2230ae618c000e34dc56c9619b43d768c https://github.com/galaxyproject/galaxy/commit/46e18dc2230ae618c000e34dc56c9... Author: vjalili <jalili.vahid@gmail.com> Date: 2018-07-23 (Mon, 23 Jul 2018) Changed paths: M lib/galaxy/managers/cloud.py Log Message: ----------- Inlined upload_tool pointer. Commit: 559730c950d5bd51882acb072814846b5b52bcb8 https://github.com/galaxyproject/galaxy/commit/559730c950d5bd51882acb0728148... Author: vjalili <jalili.vahid@gmail.com> Date: 2018-07-23 (Mon, 23 Jul 2018) Changed paths: M lib/galaxy/managers/cloud.py M lib/galaxy/webapps/galaxy/api/cloud.py Log Message: ----------- Add `input_args` to cloud upload API and manager. Commit: 1a8be699d9f4c08c5865fb327d8b2b265ad87ac8 https://github.com/galaxyproject/galaxy/commit/1a8be699d9f4c08c5865fb327d8b2... Author: vjalili <jalili.vahid@gmail.com> Date: 2018-07-23 (Mon, 23 Jul 2018) Changed paths: M lib/galaxy/managers/cloud.py Log Message: ----------- Make static the `_configure_provider` method in cloud storage manager. Commit: 87959ecb8fb5250e0ddae3cd5bc51e819308087e https://github.com/galaxyproject/galaxy/commit/87959ecb8fb5250e0ddae3cd5bc51... Author: vjalili <jalili.vahid@gmail.com> Date: 2018-07-23 (Mon, 23 Jul 2018) Changed paths: M lib/galaxy/managers/cloud.py M lib/galaxy/webapps/galaxy/api/cloud.py Log Message: ----------- Change the default value of `input_args` from empty dict to None. Commit: 87320ccd1275c1ae7dbbaf234e73a211f81325b8 https://github.com/galaxyproject/galaxy/commit/87320ccd1275c1ae7dbbaf234e73a... Author: vjalili <jalili.vahid@gmail.com> Date: 2018-07-23 (Mon, 23 Jul 2018) Changed paths: M lib/galaxy/managers/cloud.py Log Message: ----------- Update method docs in cloud manager. Commit: e697ec51b4dab8db9827287e3dcb1ad911a7c088 https://github.com/galaxyproject/galaxy/commit/e697ec51b4dab8db9827287e3dcb1... Author: vjalili <jalili.vahid@gmail.com> Date: 2018-07-23 (Mon, 23 Jul 2018) Changed paths: M lib/galaxy/managers/cloud.py Log Message: ----------- Fix a bug handling missing `input_args`. Commit: 6e3cb8888a4b0cd88d34d0a47b13b1cc268b0566 https://github.com/galaxyproject/galaxy/commit/6e3cb8888a4b0cd88d34d0a47b13b... Author: vjalili <jalili.vahid@gmail.com> Date: 2018-07-23 (Mon, 23 Jul 2018) Changed paths: M lib/galaxy/managers/cloud.py Log Message: ----------- Surround an object `get` in cloud storage manager in a try-catch block. Commit: e8cf719d4e4360c79814fd591c6aabd828b4b071 https://github.com/galaxyproject/galaxy/commit/e8cf719d4e4360c79814fd591c6aa... Author: Enis Afgan <afgane@gmail.com> Date: 2018-07-23 (Mon, 23 Jul 2018) Changed paths: M lib/galaxy/managers/cloud.py M lib/galaxy/webapps/galaxy/api/cloud.py M lib/galaxy/webapps/galaxy/buildapp.py Log Message: ----------- Merge pull request #6519 from VJalili/improve_cloud_storage_api Improvements to Cloud Storage Manager Compare: https://github.com/galaxyproject/galaxy/compare/4f1e2bf4f862...e8cf719d4e43 **NOTE:** This service been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.
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